BLASTX nr result

ID: Coptis24_contig00025899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025899
         (1319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274339.2| PREDICTED: uncharacterized protein LOC100258...   265   e-137
emb|CBI17181.3| unnamed protein product [Vitis vinifera]              265   e-137
emb|CAN81659.1| hypothetical protein VITISV_006042 [Vitis vinifera]   260   e-136
ref|XP_002513522.1| conserved hypothetical protein [Ricinus comm...   252   e-133
ref|XP_002298291.1| predicted protein [Populus trichocarpa] gi|2...   265   e-132

>ref|XP_002274339.2| PREDICTED: uncharacterized protein LOC100258526 [Vitis vinifera]
          Length = 949

 Score =  265 bits (676), Expect(2) = e-137
 Identities = 122/208 (58%), Positives = 156/208 (75%)
 Frame = +1

Query: 694  SSSGKLYEYDKSSKPSWKKHIHGKGSTKETSLAPSKGCILFDLVGVHSISLFLLTETGYL 873
            SS+G LYEYD+SSKPSWKKHI  +   ++ SL PS        +G++S+SL+LLT+ G L
Sbjct: 291  SSTGDLYEYDRSSKPSWKKHIWKEKLAQDASLMPSMASTFQGQIGLNSLSLYLLTKGGNL 350

Query: 874  LERRLHQRKWRWIFHGGPEDYHLASITAVVHDELTDKIFSLFCTTTTGSVFEYQLPKPSG 1053
            +ERRLHQRKW+WI HG P+D+HL S+T V  D+  +K+ SLF T++ G VFEYQ+ K  G
Sbjct: 351  VERRLHQRKWKWIVHGSPKDHHLTSVTPVFQDQFNEKVLSLFFTSSVGYVFEYQILKHPG 410

Query: 1054 GAQATQVKEAWVNHMHPLQAKASRGIPGLQIQIGRILFSLDDGRLAELHLSGIGGEGSPP 1233
              Q  Q+++ WV HMHPL AK +RGI GLQ Q+GRI+F LDDGRLAELHLSG+GGE    
Sbjct: 411  STQENQIEQTWVRHMHPLDAKVARGIAGLQFQVGRIMFVLDDGRLAELHLSGLGGESLGL 470

Query: 1234 TQINVRKKAAFYYKWSILDAPESEGWNA 1317
             Q+N+R+KA+  Y WSILDAPE+EGWNA
Sbjct: 471  AQVNLRRKASVKYVWSILDAPETEGWNA 498



 Score =  253 bits (645), Expect(2) = e-137
 Identities = 136/229 (59%), Positives = 166/229 (72%), Gaps = 5/229 (2%)
 Frame = +2

Query: 23  PFALLSCVNDNCSKVASIDQTPKKKEECLE--GGCFVPEHGEDS-KSKYSNKAESEEGSD 193
           PF L+SCV+ NC+KV SI  T KK+E+  E  G  F  E    S K K  +    EE  D
Sbjct: 64  PFDLVSCVDGNCTKVGSIHGTKKKEEDEEERLGREFGGEEERGSLKKKDGHGGGPEENPD 123

Query: 194 MVLNIRKRISLTRMSETSILVTGESGSIYERFWNGVQWVIAPHDLPLSAGPAVSVFLINQ 373
           +VL  RKR+SLT+MSETSI VTGESG+IYERFWNG+QWVIAPHDLP+SAG AVSVF+INQ
Sbjct: 124 VVLPRRKRLSLTKMSETSIWVTGESGAIYERFWNGLQWVIAPHDLPISAGHAVSVFIINQ 183

Query: 374 TILALSEAGYLYKLQVSESSQLTWIDFGTI--YGPSMETESSFPFQIKTGFVSYDGERAF 547
           TILALSE G LY++Q+SESS   W+DF        S +TE      IK+G VS+DG R +
Sbjct: 184 TILALSEPGNLYQMQLSESSHPIWVDFTPTGNDSTSKKTEQGSAIHIKSGVVSHDGVRVY 243

Query: 548 FAMMNGSLVELSDIESQRWIYHGHPPGGDVVAIADASSIRPDVVFTVSA 694
           F   NGSL+ELS+IE  RW++HG PPG DV AIADA++IRP+VVFT+S+
Sbjct: 244 FCTKNGSLLELSEIEPPRWVHHGRPPGADVAAIADAANIRPEVVFTISS 292


>emb|CBI17181.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  265 bits (676), Expect(2) = e-137
 Identities = 122/208 (58%), Positives = 156/208 (75%)
 Frame = +1

Query: 694  SSSGKLYEYDKSSKPSWKKHIHGKGSTKETSLAPSKGCILFDLVGVHSISLFLLTETGYL 873
            SS+G LYEYD+SSKPSWKKHI  +   ++ SL PS        +G++S+SL+LLT+ G L
Sbjct: 290  SSTGDLYEYDRSSKPSWKKHIWKEKLAQDASLMPSMASTFQGQIGLNSLSLYLLTKGGNL 349

Query: 874  LERRLHQRKWRWIFHGGPEDYHLASITAVVHDELTDKIFSLFCTTTTGSVFEYQLPKPSG 1053
            +ERRLHQRKW+WI HG P+D+HL S+T V  D+  +K+ SLF T++ G VFEYQ+ K  G
Sbjct: 350  VERRLHQRKWKWIVHGSPKDHHLTSVTPVFQDQFNEKVLSLFFTSSVGYVFEYQILKHPG 409

Query: 1054 GAQATQVKEAWVNHMHPLQAKASRGIPGLQIQIGRILFSLDDGRLAELHLSGIGGEGSPP 1233
              Q  Q+++ WV HMHPL AK +RGI GLQ Q+GRI+F LDDGRLAELHLSG+GGE    
Sbjct: 410  STQENQIEQTWVRHMHPLDAKVARGIAGLQFQVGRIMFVLDDGRLAELHLSGLGGESLGL 469

Query: 1234 TQINVRKKAAFYYKWSILDAPESEGWNA 1317
             Q+N+R+KA+  Y WSILDAPE+EGWNA
Sbjct: 470  AQVNLRRKASVKYVWSILDAPETEGWNA 497



 Score =  253 bits (645), Expect(2) = e-137
 Identities = 136/229 (59%), Positives = 166/229 (72%), Gaps = 5/229 (2%)
 Frame = +2

Query: 23  PFALLSCVNDNCSKVASIDQTPKKKEECLE--GGCFVPEHGEDS-KSKYSNKAESEEGSD 193
           PF L+SCV+ NC+KV SI  T KK+E+  E  G  F  E    S K K  +    EE  D
Sbjct: 63  PFDLVSCVDGNCTKVGSIHGTKKKEEDEEERLGREFGGEEERGSLKKKDGHGGGPEENPD 122

Query: 194 MVLNIRKRISLTRMSETSILVTGESGSIYERFWNGVQWVIAPHDLPLSAGPAVSVFLINQ 373
           +VL  RKR+SLT+MSETSI VTGESG+IYERFWNG+QWVIAPHDLP+SAG AVSVF+INQ
Sbjct: 123 VVLPRRKRLSLTKMSETSIWVTGESGAIYERFWNGLQWVIAPHDLPISAGHAVSVFIINQ 182

Query: 374 TILALSEAGYLYKLQVSESSQLTWIDFGTI--YGPSMETESSFPFQIKTGFVSYDGERAF 547
           TILALSE G LY++Q+SESS   W+DF        S +TE      IK+G VS+DG R +
Sbjct: 183 TILALSEPGNLYQMQLSESSHPIWVDFTPTGNDSTSKKTEQGSAIHIKSGVVSHDGVRVY 242

Query: 548 FAMMNGSLVELSDIESQRWIYHGHPPGGDVVAIADASSIRPDVVFTVSA 694
           F   NGSL+ELS+IE  RW++HG PPG DV AIADA++IRP+VVFT+S+
Sbjct: 243 FCTKNGSLLELSEIEPPRWVHHGRPPGADVAAIADAANIRPEVVFTISS 291


>emb|CAN81659.1| hypothetical protein VITISV_006042 [Vitis vinifera]
          Length = 952

 Score =  260 bits (665), Expect(2) = e-136
 Identities = 122/212 (57%), Positives = 156/212 (73%), Gaps = 4/212 (1%)
 Frame = +1

Query: 694  SSSGKLYEYDKSSKPSWKKHIHGKGSTKETSLAPSKGCILFDLVGVHSISLFLLTETGY- 870
            SS+G LYEYD+SSKPSWKKHI  +   ++ SL PS        +G++S+SL+LLT+  Y 
Sbjct: 290  SSTGDLYEYDRSSKPSWKKHIWKEKLAQDASLMPSMASTFQGQIGLNSLSLYLLTKISYQ 349

Query: 871  ---LLERRLHQRKWRWIFHGGPEDYHLASITAVVHDELTDKIFSLFCTTTTGSVFEYQLP 1041
               L+ERRLHQRKW+WI HG P+D+HL S+T V  D+  +K+ SLF T++ G VFEYQ+ 
Sbjct: 350  GGNLVERRLHQRKWKWIVHGSPKDHHLTSVTPVFQDQFNEKVLSLFFTSSVGYVFEYQIL 409

Query: 1042 KPSGGAQATQVKEAWVNHMHPLQAKASRGIPGLQIQIGRILFSLDDGRLAELHLSGIGGE 1221
            K  G  Q  Q+++ WV HMHPL AK +RGI GLQ Q+GRI+F LDDGRLAELHLSG+GGE
Sbjct: 410  KHPGSTQENQIEQTWVRHMHPLDAKVARGIAGLQFQVGRIMFVLDDGRLAELHLSGLGGE 469

Query: 1222 GSPPTQINVRKKAAFYYKWSILDAPESEGWNA 1317
                 Q+N+R+KA+  Y WSILDAPE+EGWNA
Sbjct: 470  SLGLAQVNLRRKASVKYVWSILDAPETEGWNA 501



 Score =  253 bits (645), Expect(2) = e-136
 Identities = 136/229 (59%), Positives = 166/229 (72%), Gaps = 5/229 (2%)
 Frame = +2

Query: 23  PFALLSCVNDNCSKVASIDQTPKKKEECLE--GGCFVPEHGEDS-KSKYSNKAESEEGSD 193
           PF L+SCV+ NC+KV SI  T KK+E+  E  G  F  E    S K K  +    EE  D
Sbjct: 63  PFDLVSCVDGNCTKVGSIHGTKKKEEDEEERLGREFGGEEERGSLKKKDGHGGGPEENPD 122

Query: 194 MVLNIRKRISLTRMSETSILVTGESGSIYERFWNGVQWVIAPHDLPLSAGPAVSVFLINQ 373
           +VL  RKR+SLT+MSETSI VTGESG+IYERFWNG+QWVIAPHDLP+SAG AVSVF+INQ
Sbjct: 123 VVLPRRKRLSLTKMSETSIWVTGESGAIYERFWNGLQWVIAPHDLPISAGHAVSVFIINQ 182

Query: 374 TILALSEAGYLYKLQVSESSQLTWIDFGTI--YGPSMETESSFPFQIKTGFVSYDGERAF 547
           TILALSE G LY++Q+SESS   W+DF        S +TE      IK+G VS+DG R +
Sbjct: 183 TILALSEPGNLYQMQLSESSHPIWVDFTPTGNDSTSKKTEQGSAIHIKSGVVSHDGVRVY 242

Query: 548 FAMMNGSLVELSDIESQRWIYHGHPPGGDVVAIADASSIRPDVVFTVSA 694
           F   NGSL+ELS+IE  RW++HG PPG DV AIADA++IRP+VVFT+S+
Sbjct: 243 FCTKNGSLLELSEIEPPRWVHHGRPPGADVAAIADAANIRPEVVFTISS 291


>ref|XP_002513522.1| conserved hypothetical protein [Ricinus communis]
            gi|223547430|gb|EEF48925.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 942

 Score =  252 bits (643), Expect(2) = e-133
 Identities = 125/209 (59%), Positives = 161/209 (77%), Gaps = 1/209 (0%)
 Frame = +1

Query: 694  SSSGKLYEYDKSSKPSWKKHIHGKGSTKETSLAPSKGCILFDLVGVHSISLFLLTETGYL 873
            SS G LYEYDKSSKPSWKKHI  +G+ ++  L PS G  +  L G +SISLFLLT++G L
Sbjct: 288  SSIGDLYEYDKSSKPSWKKHIWTEGTGEDALLIPSTGYTINGLSGEYSISLFLLTKSGKL 347

Query: 874  LERRLHQRKWRWIFHGGPEDYHLASITAVVHDELTDKIFSLFCTTTTGSVFEYQLPKPSG 1053
            +ERRL+QRKW+WI HG P+D+ L S+T VV D+ +++ FSLF TTTTG +FEY++ K SG
Sbjct: 348  VERRLNQRKWKWIIHGSPKDHRLTSMTPVVQDD-SNENFSLFFTTTTGYIFEYRILKHSG 406

Query: 1054 GAQATQVKEAWVNHMHPLQAKASRGIPGLQIQIGRILFSLDDGRLAELHLSGIGGEG-SP 1230
                 QV E W++H HP  AKA++GI GLQ+Q+GRI+F+LDDGRLAELHL G+GG+   P
Sbjct: 407  TLD-NQVSEPWLSHTHPPNAKAAKGIAGLQLQVGRIIFALDDGRLAELHLPGLGGDNIGP 465

Query: 1231 PTQINVRKKAAFYYKWSILDAPESEGWNA 1317
              QIN+R+KA+  Y WS+LDAPE+EGWNA
Sbjct: 466  NYQINIRRKASVKYLWSMLDAPETEGWNA 494



 Score =  251 bits (641), Expect(2) = e-133
 Identities = 128/228 (56%), Positives = 164/228 (71%), Gaps = 3/228 (1%)
 Frame = +2

Query: 23  PFALLSCVNDNCSKVASIDQTPK-KKEECLEGGCFVPEHGEDSKSKYSNKAESEEGSDMV 199
           P+ L+SC+NDNC+KV SIDQ  K K+EE LE    V    E  K K  +   +EE S+++
Sbjct: 63  PYDLVSCINDNCTKVGSIDQVTKNKEEEHLEREYDVSGQTESLKEKDGDGEVAEENSEVI 122

Query: 200 LNIRKRISLTRMSETSILVTGESGSIYERFWNGVQWVIAPHDLPLSAGPAVSVFLINQTI 379
           L  RKRISLTRMSETSI VTGESGS+YERFWNGVQWVIAPHDLP+ AG A+ VF +N TI
Sbjct: 123 LPQRKRISLTRMSETSIWVTGESGSVYERFWNGVQWVIAPHDLPILAGHAICVFFVNHTI 182

Query: 380 LALSEAGYLYKLQVSESSQLTWIDFGTIYG--PSMETESSFPFQIKTGFVSYDGERAFFA 553
           LALSE G LY++Q+S+SSQ  W+ F        + E E S    IK+G VSYDG R +F 
Sbjct: 183 LALSEVGVLYQMQLSDSSQPIWVAFTPTLDSTTNKEAEQSSMILIKSGVVSYDGLRIYFC 242

Query: 554 MMNGSLVELSDIESQRWIYHGHPPGGDVVAIADASSIRPDVVFTVSAV 697
              G L+EL+++E  RW++HG PPGG+V AIADA +IRP+V++T+S++
Sbjct: 243 TKEGLLLELAEVEPPRWVHHGRPPGGNVAAIADAGTIRPEVLYTISSI 290


>ref|XP_002298291.1| predicted protein [Populus trichocarpa] gi|222845549|gb|EEE83096.1|
            predicted protein [Populus trichocarpa]
          Length = 979

 Score =  265 bits (678), Expect(2) = e-132
 Identities = 126/209 (60%), Positives = 160/209 (76%), Gaps = 1/209 (0%)
 Frame = +1

Query: 694  SSSGKLYEYDKSSKPSWKKHIHGKGSTKETSLAPSKGCILFDLVGVHSISLFLLTETGYL 873
            SS+G LYEYD+SSKPSWKKHI  +G+  + SL PS+GC L  L G +SISLFLLT+ G L
Sbjct: 282  SSTGDLYEYDRSSKPSWKKHIWAEGTVADASLMPSRGCTLHGLSGEYSISLFLLTKGGKL 341

Query: 874  LERRLHQRKWRWIFHGGPEDYHLASITAVVHDELTDKIFSLFCTTTTGSVFEYQLPKPSG 1053
            +ERRL+QRKW+WI HG P+D+ L SIT VV DE  +K  SLF TT++GSVFEY++ K SG
Sbjct: 342  VERRLNQRKWKWIVHGSPKDHKLTSITPVVQDETNEKFLSLFFTTSSGSVFEYRILKQSG 401

Query: 1054 GAQATQVKEAWVNHMHPLQAKASRGIPGLQIQIGRILFSLDDGRLAELHLSGIGGEGSPP 1233
              Q  Q+ EAW++HMHP  AK + GI G+ +Q GRI+F L DGRLAELHL G+GGE + P
Sbjct: 402  TDQENQIPEAWLSHMHPPHAKVASGIAGIPLQAGRIVFPLHDGRLAELHLPGLGGENTGP 461

Query: 1234 T-QINVRKKAAFYYKWSILDAPESEGWNA 1317
              Q+N+RK+A+  Y WS++DAPE+EGWNA
Sbjct: 462  NHQVNLRKRASVKYVWSMIDAPETEGWNA 490



 Score =  234 bits (596), Expect(2) = e-132
 Identities = 122/231 (52%), Positives = 157/231 (67%), Gaps = 7/231 (3%)
 Frame = +2

Query: 23  PFALLSCVNDNCSKVASIDQTPKKKEECLEGGCFVPEHGEDSKSKYSNKAESEEG----- 187
           P+ L+SCVNDNC+KV  I    +  EE  E         +DSK   + K + E+G     
Sbjct: 59  PYELVSCVNDNCTKVGKIHPVKRDVEENSE------RENDDSKKNENLKRKVEDGGTEAN 112

Query: 188 SDMVLNIRKRISLTRMSETSILVTGESGSIYERFWNGVQWVIAPHDLPLSAGPAVSVFLI 367
           S++VL +RKRISLT+MSE+SI VTGESGSIYERFWNG+QWVIAPHDLP+  G A+ VF++
Sbjct: 113 SEIVLPLRKRISLTKMSESSIWVTGESGSIYERFWNGIQWVIAPHDLPVLTGHAICVFIV 172

Query: 368 NQTILALSEAGYLYKLQVSESSQLTWIDFGTIYGPS--METESSFPFQIKTGFVSYDGER 541
           NQTIL LSEAG LY++ + ESSQ  W++F      S   E E S    I +G +S+DG +
Sbjct: 173 NQTILTLSEAGTLYQMMLGESSQPIWVEFTPTLDESTNREAEESSLMLINSGVISHDGLK 232

Query: 542 AFFAMMNGSLVELSDIESQRWIYHGHPPGGDVVAIADASSIRPDVVFTVSA 694
            +F   NGSL+ELS+ E  RW  HG PPG DV AI DA++IRPDVV+T+S+
Sbjct: 233 IYFCTKNGSLLELSEAEPPRWENHGRPPGADVAAIVDAATIRPDVVYTISS 283


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