BLASTX nr result

ID: Coptis24_contig00025893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025893
         (1337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274365.1| PREDICTED: uncharacterized protein LOC100261...   384   e-104
ref|XP_004145552.1| PREDICTED: uncharacterized protein LOC101205...   369   e-99 
ref|XP_002306994.1| predicted protein [Populus trichocarpa] gi|2...   361   3e-97
ref|XP_002301902.1| predicted protein [Populus trichocarpa] gi|2...   357   4e-96
ref|XP_002510715.1| conserved hypothetical protein [Ricinus comm...   357   5e-96

>ref|XP_002274365.1| PREDICTED: uncharacterized protein LOC100261560 [Vitis vinifera]
            gi|297745587|emb|CBI40752.3| unnamed protein product
            [Vitis vinifera]
          Length = 335

 Score =  384 bits (986), Expect = e-104
 Identities = 199/312 (63%), Positives = 242/312 (77%), Gaps = 2/312 (0%)
 Frame = +1

Query: 103  KRQIFASGLEYRAVV--QFSKFNYTTWNYRKSYLLRVCCSSENADENKSVRNEVEKDRDV 276
            K  I ++ LE+R  +   +S++N+      +S+L R    S N+DE+K V+ E E     
Sbjct: 22   KHGISSNILEHRRELGLSYSRYNWVQQRTARSFLFRALSKSANSDEDKVVKTETE----- 76

Query: 277  VLDSEKPGGRLRETITSLTPVLVMMKKKIGTNYAVGLFIAFAIVVISIREYLKRKSRSNY 456
            +   +   G+L+ETI S  PV+ +MKK +G N+A+GL +A  I+V+++R Y+ RK  S+ 
Sbjct: 77   INGWKNSIGKLQETIKSFPPVVFVMKKDVGINFAIGLCVATTILVVAVRVYVARKVSSSR 136

Query: 457  HGSVAELVKRGQLRSDRRGISRPLKYDDPFNNPLVKVSKSNSSVEMCGKVYRLAPVTLTE 636
             GSVA+LV+RGQLRSDRRGIS PLKY+DPFNNPLVKV KSNS+VEMCGKVYRLAPVTLT+
Sbjct: 137  PGSVADLVRRGQLRSDRRGISSPLKYEDPFNNPLVKVGKSNSTVEMCGKVYRLAPVTLTK 196

Query: 637  VEQSNHQKRRSRAYQWKRPTMFLKEGDSIPPDVDPDTVRWIPANHPFATTVNEIDEDLAQ 816
             +Q+ HQKRRSRAYQWKRPTMFLKEGDSIP DVDPDTVRWIPANHPFATT +EIDE LAQ
Sbjct: 197  EQQAIHQKRRSRAYQWKRPTMFLKEGDSIPSDVDPDTVRWIPANHPFATTASEIDEGLAQ 256

Query: 817  SNVYQKHGVPFRIKAEHEALQRKLETLQSEQKLNKLVIDAGNVRNFERPFKSSTKSNENA 996
            +NVYQKHGVPFRI+AEHEALQRKLE LQSEQKLNKLVID  N ++FERPFK  T S+E A
Sbjct: 257  NNVYQKHGVPFRIQAEHEALQRKLEALQSEQKLNKLVIDPTNAKDFERPFKHLT-SHEQA 315

Query: 997  EQRPSHHQGGDS 1032
             Q PS+  G DS
Sbjct: 316  GQGPSNRIGSDS 327


>ref|XP_004145552.1| PREDICTED: uncharacterized protein LOC101205591 [Cucumis sativus]
            gi|449485086|ref|XP_004157065.1| PREDICTED:
            uncharacterized protein LOC101232095 [Cucumis sativus]
          Length = 358

 Score =  369 bits (947), Expect = e-99
 Identities = 184/267 (68%), Positives = 214/267 (80%)
 Frame = +1

Query: 286  SEKPGGRLRETITSLTPVLVMMKKKIGTNYAVGLFIAFAIVVISIREYLKRKSRSNYHGS 465
            SE   G+++E I S  P + +M K      A+G  +  A + I  R YL RKSR+++ GS
Sbjct: 92   SEDYIGKMQEMIISSPPGVFLMNKCTRNGLAIGFCVVTACLAIVARVYLMRKSRNSHSGS 151

Query: 466  VAELVKRGQLRSDRRGISRPLKYDDPFNNPLVKVSKSNSSVEMCGKVYRLAPVTLTEVEQ 645
            VA+LV+RGQLRSDRRGIS+PLKY+DPFNNPLVKV KSNSSVEMCGKVYRLAPVTLT+ EQ
Sbjct: 152  VADLVRRGQLRSDRRGISKPLKYNDPFNNPLVKVDKSNSSVEMCGKVYRLAPVTLTKEEQ 211

Query: 646  SNHQKRRSRAYQWKRPTMFLKEGDSIPPDVDPDTVRWIPANHPFATTVNEIDEDLAQSNV 825
            + HQKRRSRAYQWKRPTMFLKEGDSIPPDVDPDT+RWIPANHPFATT ++IDEDLAQ+NV
Sbjct: 212  NIHQKRRSRAYQWKRPTMFLKEGDSIPPDVDPDTIRWIPANHPFATTASDIDEDLAQNNV 271

Query: 826  YQKHGVPFRIKAEHEALQRKLETLQSEQKLNKLVIDAGNVRNFERPFKSSTKSNENAEQR 1005
            YQKHGVPFRI+AEHEALQRKLE LQS+QKLN L ID G+V+ FERPFKS +KS+E  EQ 
Sbjct: 272  YQKHGVPFRIQAEHEALQRKLEALQSDQKLNNLFIDPGSVKEFERPFKSKSKSDEQVEQS 331

Query: 1006 PSHHQGGDSGSPKPDTGSNSSDTKKPS 1086
             S HQ G+S  P    G +SSD  + S
Sbjct: 332  SSDHQTGESKPPNSFGGQSSSDEAQKS 358


>ref|XP_002306994.1| predicted protein [Populus trichocarpa] gi|222856443|gb|EEE93990.1|
            predicted protein [Populus trichocarpa]
          Length = 269

 Score =  361 bits (926), Expect = 3e-97
 Identities = 176/262 (67%), Positives = 210/262 (80%)
 Frame = +1

Query: 319  ITSLTPVLVMMKKKIGTNYAVGLFIAFAIVVISIREYLKRKSRSNYHGSVAELVKRGQLR 498
            IT+L P + +MK+  G+N+ + L IA A +V+S+R Y+ RKSR +  GSVA+LV+RGQLR
Sbjct: 8    ITTLPPFVFVMKRGAGSNFVIWLCIATAFLVVSVRVYMVRKSRPSRPGSVADLVRRGQLR 67

Query: 499  SDRRGISRPLKYDDPFNNPLVKVSKSNSSVEMCGKVYRLAPVTLTEVEQSNHQKRRSRAY 678
            SDRRGIS PLKY+DPFNNPLVKV KSNS++E+ GKVY LAPVTLTE +Q+ HQ+RRSRAY
Sbjct: 68   SDRRGISSPLKYEDPFNNPLVKVGKSNSTIEIFGKVYHLAPVTLTEEQQAIHQRRRSRAY 127

Query: 679  QWKRPTMFLKEGDSIPPDVDPDTVRWIPANHPFATTVNEIDEDLAQSNVYQKHGVPFRIK 858
            QWKRPT+FLKEGD +PPDVDPDTVRWIP NHPFATT ++IDEDLAQ+NVYQKHGVPFRIK
Sbjct: 128  QWKRPTIFLKEGDPVPPDVDPDTVRWIPTNHPFATTASDIDEDLAQNNVYQKHGVPFRIK 187

Query: 859  AEHEALQRKLETLQSEQKLNKLVIDAGNVRNFERPFKSSTKSNENAEQRPSHHQGGDSGS 1038
            AEHEALQRKLE LQ+EQKLNKLVID GN + FERPF+ + KSNE  EQ P   Q GDS  
Sbjct: 188  AEHEALQRKLEALQNEQKLNKLVIDTGNAKEFERPFRFNPKSNELVEQNPFKSQSGDSKP 247

Query: 1039 PKPDTGSNSSDTKKPSDEP*NP 1104
             + D   N  ++   S+E   P
Sbjct: 248  SQSDRAPNPFNSSSSSEEMQKP 269


>ref|XP_002301902.1| predicted protein [Populus trichocarpa] gi|222843628|gb|EEE81175.1|
            predicted protein [Populus trichocarpa]
          Length = 252

 Score =  357 bits (916), Expect = 4e-96
 Identities = 175/252 (69%), Positives = 209/252 (82%)
 Frame = +1

Query: 349  MKKKIGTNYAVGLFIAFAIVVISIREYLKRKSRSNYHGSVAELVKRGQLRSDRRGISRPL 528
            M++  G+N+ + L +A A +V+++R Y+ RKSR +  GSVA+LV+RGQLRSDRRGIS PL
Sbjct: 1    MRRASGSNFVIWLCVATAFLVVAVRVYVVRKSRQSRPGSVADLVRRGQLRSDRRGISSPL 60

Query: 529  KYDDPFNNPLVKVSKSNSSVEMCGKVYRLAPVTLTEVEQSNHQKRRSRAYQWKRPTMFLK 708
            KY+DPFNNPLVKVSKSNS+VEMCGKVYRLAPVTLT+ +Q+ HQ+RRSRAYQWKRPT+FLK
Sbjct: 61   KYEDPFNNPLVKVSKSNSTVEMCGKVYRLAPVTLTKDQQAIHQRRRSRAYQWKRPTIFLK 120

Query: 709  EGDSIPPDVDPDTVRWIPANHPFATTVNEIDEDLAQSNVYQKHGVPFRIKAEHEALQRKL 888
            EGDSIPP+VDPDTVRWIPANHPFATT ++IDEDLAQ+NVYQKHGVPFRI+AEHEALQRKL
Sbjct: 121  EGDSIPPNVDPDTVRWIPANHPFATTASDIDEDLAQNNVYQKHGVPFRIQAEHEALQRKL 180

Query: 889  ETLQSEQKLNKLVIDAGNVRNFERPFKSSTKSNENAEQRPSHHQGGDSGSPKPDTGSNSS 1068
            ETLQ+EQKLNKLVID GN + FER FKS+ KSNE  E+   + Q GDS   K D   NS 
Sbjct: 181  ETLQNEQKLNKLVIDTGNAKEFERSFKSNPKSNELVERSSFNSQSGDSKPLKSDRSLNSL 240

Query: 1069 DTKKPSDEP*NP 1104
            ++    +E   P
Sbjct: 241  NSSSSPEEMQKP 252


>ref|XP_002510715.1| conserved hypothetical protein [Ricinus communis]
            gi|223551416|gb|EEF52902.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 358

 Score =  357 bits (915), Expect = 5e-96
 Identities = 177/264 (67%), Positives = 216/264 (81%), Gaps = 1/264 (0%)
 Frame = +1

Query: 304  RLRETITSLTPVLVMMKKKIGTNYAVGLFIAFAIVVISIREYLKRKSRSNYH-GSVAELV 480
            + +  I++L PV+ + +++ G+N  + L +A A +VI++R Y+ RK+R     GSVA+LV
Sbjct: 93   KFQAIISTLPPVVFVRRRQSGSNIIIWLCVATAFLVIALRVYVVRKTRYRRPPGSVADLV 152

Query: 481  KRGQLRSDRRGISRPLKYDDPFNNPLVKVSKSNSSVEMCGKVYRLAPVTLTEVEQSNHQK 660
            +RGQLRSDRRGIS PLKYDDPFNNPLVKV KSNS+VEMCGKVYRLAPVTLT+ +Q+ HQK
Sbjct: 153  RRGQLRSDRRGISMPLKYDDPFNNPLVKVGKSNSTVEMCGKVYRLAPVTLTKEQQAIHQK 212

Query: 661  RRSRAYQWKRPTMFLKEGDSIPPDVDPDTVRWIPANHPFATTVNEIDEDLAQSNVYQKHG 840
            RRSRAYQWKRPT+FLKEGDSIPPDVDPDTVRWIPANHPFATT ++IDEDLAQ+NVYQKHG
Sbjct: 213  RRSRAYQWKRPTIFLKEGDSIPPDVDPDTVRWIPANHPFATTASDIDEDLAQTNVYQKHG 272

Query: 841  VPFRIKAEHEALQRKLETLQSEQKLNKLVIDAGNVRNFERPFKSSTKSNENAEQRPSHHQ 1020
            VPFRI+AEHEALQRKLE LQ +QKLNKLVID  N ++FERPFKS+ KSNE  EQ P + Q
Sbjct: 273  VPFRIQAEHEALQRKLEALQQDQKLNKLVIDTSNAKDFERPFKSNPKSNELVEQSPFNDQ 332

Query: 1021 GGDSGSPKPDTGSNSSDTKKPSDE 1092
             G+    K ++  NS ++   S+E
Sbjct: 333  AGEPKPSKSNSIPNSFNSSLSSEE 356


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