BLASTX nr result

ID: Coptis24_contig00025890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025890
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29431.3| unnamed protein product [Vitis vinifera]              152   8e-35
ref|XP_004172173.1| PREDICTED: uncharacterized protein LOC101230...   144   3e-32
ref|XP_004146799.1| PREDICTED: uncharacterized protein LOC101220...   144   3e-32
ref|XP_002510762.1| set domain protein, putative [Ricinus commun...   140   5e-31
ref|XP_003534870.1| PREDICTED: uncharacterized protein LOC100805...   135   1e-29

>emb|CBI29431.3| unnamed protein product [Vitis vinifera]
          Length = 1127

 Score =  152 bits (385), Expect = 8e-35
 Identities = 80/172 (46%), Positives = 107/172 (62%)
 Frame = +2

Query: 341 MANCTGGAPLSSSSGGVKSEVQNGYTQPPMQPVSVSGWMYINECGQMCGPYIQEQLYEGL 520
           + +C  G  L+   GG      +GY  PP     V GWMYINE GQMCGPYIQ+QLYEGL
Sbjct: 15  LQSCNIGGTLNQDRGG------SGYAPPPF----VGGWMYINEQGQMCGPYIQQQLYEGL 64

Query: 521 STGFLPEDLPVYPVVNGGLINPVHLKFFKQFPEHVATGFAYWNTNLKTTLTGEHTINSGS 700
           STGFLP++LPVYPVVNG LINPV LK+FKQFP+HVATGFAY +  +  T+          
Sbjct: 65  STGFLPDELPVYPVVNGNLINPVPLKYFKQFPDHVATGFAYLSAGISATIR--------- 115

Query: 701 CSSNVTSNEQVKSIDCSAAPVAHNVSQQTPSSCDNYTSYGYQPPIQDAEATN 856
             +N+T++ Q  +++ +A    +  S   P  C +++ YG+   + + EA N
Sbjct: 116 -PTNLTAHRQDGTVEFAALDKGYLQSASQP--CVSHSVYGFDGQMPNTEAAN 164


>ref|XP_004172173.1| PREDICTED: uncharacterized protein LOC101230765, partial [Cucumis
           sativus]
          Length = 627

 Score =  144 bits (363), Expect = 3e-32
 Identities = 80/176 (45%), Positives = 108/176 (61%), Gaps = 3/176 (1%)
 Frame = +2

Query: 308 GSHVSVEASSSMANCTGGAPLSSSSGG--VKSEVQNGYTQPPMQPVSVSGWMYINECGQM 481
           GS+ SV+ S  +   +   P   SS G   + +  +GY+ P      VSGWMY+NE GQM
Sbjct: 77  GSYSSVDMSCQLNGTSPDLPECCSSEGSSFRDKGFSGYSFP----TCVSGWMYVNEQGQM 132

Query: 482 CGPYIQEQLYEGLSTGFLPEDLPVYPVVNGGLINPVHLKFFKQFPEHVATGFAYWNTNLK 661
           CGPYIQEQL+EGLSTGFLP++L VYPV NG L NPV LK+FKQFP+H+ATGFAY + ++ 
Sbjct: 133 CGPYIQEQLHEGLSTGFLPDELLVYPVFNGALTNPVPLKYFKQFPDHIATGFAYLSVDIS 192

Query: 662 TT-LTGEHTINSGSCSSNVTSNEQVKSIDCSAAPVAHNVSQQTPSSCDNYTSYGYQ 826
              L G H   S +C  ++  + Q   ++C   P   + SQ +P       S+GY+
Sbjct: 193 NMGLNGNH---SDACKIDLAMHRQEGLVECGNPPTPCHDSQSSP------LSFGYE 239


>ref|XP_004146799.1| PREDICTED: uncharacterized protein LOC101220062 [Cucumis sativus]
          Length = 1289

 Score =  144 bits (363), Expect = 3e-32
 Identities = 80/176 (45%), Positives = 108/176 (61%), Gaps = 3/176 (1%)
 Frame = +2

Query: 308 GSHVSVEASSSMANCTGGAPLSSSSGG--VKSEVQNGYTQPPMQPVSVSGWMYINECGQM 481
           GS+ SV+ S  +   +   P   SS G   + +  +GY+ P      VSGWMY+NE GQM
Sbjct: 77  GSYSSVDMSCQLNGTSPDLPECCSSEGSSFRDKGFSGYSFP----TCVSGWMYVNEQGQM 132

Query: 482 CGPYIQEQLYEGLSTGFLPEDLPVYPVVNGGLINPVHLKFFKQFPEHVATGFAYWNTNLK 661
           CGPYIQEQL+EGLSTGFLP++L VYPV NG L NPV LK+FKQFP+H+ATGFAY + ++ 
Sbjct: 133 CGPYIQEQLHEGLSTGFLPDELLVYPVFNGALTNPVPLKYFKQFPDHIATGFAYLSVDIS 192

Query: 662 TT-LTGEHTINSGSCSSNVTSNEQVKSIDCSAAPVAHNVSQQTPSSCDNYTSYGYQ 826
              L G H   S +C  ++  + Q   ++C   P   + SQ +P       S+GY+
Sbjct: 193 NMGLNGNH---SDACKIDLAMHRQEGLVECGNPPTPCHDSQSSP------LSFGYE 239


>ref|XP_002510762.1| set domain protein, putative [Ricinus communis]
           gi|223551463|gb|EEF52949.1| set domain protein, putative
           [Ricinus communis]
          Length = 1258

 Score =  140 bits (352), Expect = 5e-31
 Identities = 75/150 (50%), Positives = 90/150 (60%)
 Frame = +2

Query: 278 FSVCDPSRTVGSHVSVEASSSMANCTGGAPLSSSSGGVKSEVQNGYTQPPMQPVSVSGWM 457
           F  C   +T  S V +E S  +   + G P SS++GG     Q+      M P   SGWM
Sbjct: 68  FCCCLDKKTCSSSV-LEMSCQLNGNSSGIPESSNAGGSVKSYQDKNFPGYMPPAFASGWM 126

Query: 458 YINECGQMCGPYIQEQLYEGLSTGFLPEDLPVYPVVNGGLINPVHLKFFKQFPEHVATGF 637
           Y+N  GQMCGPYIQ+QLYEGLSTGFL EDLPVYPV+NG L+NPV LK+F QFP+HVATGF
Sbjct: 127 YLNVNGQMCGPYIQQQLYEGLSTGFLHEDLPVYPVLNGTLVNPVPLKYFNQFPDHVATGF 186

Query: 638 AYWNTNLKTTLTGEHTINSGSCSSNVTSNE 727
           AY    +  T        S S  S +   E
Sbjct: 187 AYLGIGISGTSMPMSHFTSVSMDSAIHRQE 216


>ref|XP_003534870.1| PREDICTED: uncharacterized protein LOC100805708 [Glycine max]
          Length = 1213

 Score =  135 bits (341), Expect = 1e-29
 Identities = 77/159 (48%), Positives = 100/159 (62%), Gaps = 2/159 (1%)
 Frame = +2

Query: 323 VEASSSMANCTGGAPLSSSSGGVKSEVQN--GYTQPPMQPVSVSGWMYINECGQMCGPYI 496
           VE S      +G  P+ S++G +    Q+  GY Q   QP  VSGWMY+NE GQMCGPYI
Sbjct: 75  VEMSCPSNVKSGYVPVCSTTGHISHMDQSFCGYVQ---QPAFVSGWMYVNENGQMCGPYI 131

Query: 497 QEQLYEGLSTGFLPEDLPVYPVVNGGLINPVHLKFFKQFPEHVATGFAYWNTNLKTTLTG 676
           +EQLYEGL+TGFLP +LPVYPV+NG L++PV L +FKQFP+HV+TGFAY +         
Sbjct: 132 KEQLYEGLTTGFLPSELPVYPVINGTLMSPVPLNYFKQFPDHVSTGFAYLSMGF------ 185

Query: 677 EHTINSGSCSSNVTSNEQVKSIDCSAAPVAHNVSQQTPS 793
                SG+    + + EQ +S +  AAP+A N   Q  S
Sbjct: 186 -----SGTRVPTMAAYEQDRSFE-HAAPLAVNPDSQPVS 218


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