BLASTX nr result

ID: Coptis24_contig00025886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025886
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311844.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32
ref|XP_004159826.1| PREDICTED: uncharacterized LOC101218189 [Cuc...   133   1e-29
ref|XP_004134186.1| PREDICTED: uncharacterized protein LOC101218...   133   1e-29
ref|XP_002873908.1| pale-green and chlorophyll B reduced 2 [Arab...   131   5e-29
ref|NP_197367.1| Rossmann-fold NAD(P)-binding domain-containing ...   129   2e-28

>ref|XP_002311844.1| predicted protein [Populus trichocarpa] gi|222851664|gb|EEE89211.1|
           predicted protein [Populus trichocarpa]
          Length = 418

 Score =  143 bits (361), Expect = 1e-32
 Identities = 74/109 (67%), Positives = 86/109 (78%)
 Frame = +1

Query: 4   PLHLSNPVKFKGQSGCSIKCSNAPSVEATLSSFRTKKPKDINVLVVGSTGYIGKYVVKEL 183
           PL+ S P KF  +    I+ S A SVEAT SSFR K PKDIN+LV GSTGYIGK+VVKEL
Sbjct: 45  PLNSSLPFKFSVKRINPIRSSTATSVEATQSSFRNKNPKDINILVAGSTGYIGKFVVKEL 104

Query: 184 VKRGFNVIAIAREQSGIKGKNSKEETLKELNGANVCFSDVTNLGFLQNA 330
           V RGFNVIA+ARE+SGI+GKNS+EETL +L GANVCFSDVT L  L+ +
Sbjct: 105 VNRGFNVIAVAREKSGIRGKNSEEETLNQLQGANVCFSDVTKLETLEKS 153


>ref|XP_004159826.1| PREDICTED: uncharacterized LOC101218189 [Cucumis sativus]
          Length = 467

 Score =  133 bits (335), Expect = 1e-29
 Identities = 69/108 (63%), Positives = 81/108 (75%)
 Frame = +1

Query: 7   LHLSNPVKFKGQSGCSIKCSNAPSVEATLSSFRTKKPKDINVLVVGSTGYIGKYVVKELV 186
           L LS   KF  Q    I  S+ P VE+T SSFR K PKD N+LVVGSTGYIG +VVKELV
Sbjct: 47  LRLSQTPKFSRQRRNPIVVSSTPVVESTKSSFRAKNPKDTNILVVGSTGYIGNFVVKELV 106

Query: 187 KRGFNVIAIAREQSGIKGKNSKEETLKELNGANVCFSDVTNLGFLQNA 330
            RGFNVIAIARE+SGIKG+NSKE+   +L GANVCFSDV++L  L+ +
Sbjct: 107 SRGFNVIAIAREKSGIKGRNSKEQASDQLKGANVCFSDVSHLDVLEKS 154


>ref|XP_004134186.1| PREDICTED: uncharacterized protein LOC101218189 [Cucumis sativus]
           gi|404160691|gb|AFR53113.1| divinyl reductase [Cucumis
           sativus]
          Length = 419

 Score =  133 bits (335), Expect = 1e-29
 Identities = 69/108 (63%), Positives = 81/108 (75%)
 Frame = +1

Query: 7   LHLSNPVKFKGQSGCSIKCSNAPSVEATLSSFRTKKPKDINVLVVGSTGYIGKYVVKELV 186
           L LS   KF  Q    I  S+ P VE+T SSFR K PKD N+LVVGSTGYIG +VVKELV
Sbjct: 47  LRLSQTPKFSRQRRNPIVVSSTPVVESTKSSFRAKNPKDTNILVVGSTGYIGNFVVKELV 106

Query: 187 KRGFNVIAIAREQSGIKGKNSKEETLKELNGANVCFSDVTNLGFLQNA 330
            RGFNVIAIARE+SGIKG+NSKE+   +L GANVCFSDV++L  L+ +
Sbjct: 107 SRGFNVIAIAREKSGIKGRNSKEQASDQLKGANVCFSDVSHLDVLEKS 154


>ref|XP_002873908.1| pale-green and chlorophyll B reduced 2 [Arabidopsis lyrata subsp.
           lyrata] gi|297319745|gb|EFH50167.1| pale-green and
           chlorophyll B reduced 2 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 417

 Score =  131 bits (330), Expect = 5e-29
 Identities = 63/82 (76%), Positives = 73/82 (89%)
 Frame = +1

Query: 85  ATLSSFRTKKPKDINVLVVGSTGYIGKYVVKELVKRGFNVIAIAREQSGIKGKNSKEETL 264
           AT SSFR K PKDINVLVVGSTGYIG++VVKE++KRGFNVIA+ARE+SGI+GKN KEETL
Sbjct: 71  ATSSSFRNKSPKDINVLVVGSTGYIGRFVVKEMIKRGFNVIAVAREKSGIRGKNDKEETL 130

Query: 265 KELNGANVCFSDVTNLGFLQNA 330
           K+L GANVCFSDVT L  L+ +
Sbjct: 131 KQLQGANVCFSDVTELDVLEKS 152


>ref|NP_197367.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
           thaliana] gi|98961123|gb|ABF59045.1| At5g18660
           [Arabidopsis thaliana] gi|332005212|gb|AED92595.1|
           Rossmann-fold NAD(P)-binding domain-containing protein
           [Arabidopsis thaliana]
          Length = 417

 Score =  129 bits (325), Expect = 2e-28
 Identities = 62/82 (75%), Positives = 72/82 (87%)
 Frame = +1

Query: 85  ATLSSFRTKKPKDINVLVVGSTGYIGKYVVKELVKRGFNVIAIAREQSGIKGKNSKEETL 264
           AT  SFR K PKDINVLVVGSTGYIG++VVKE++KRGFNVIA+ARE+SGI+GKN KEETL
Sbjct: 71  ATSPSFRNKSPKDINVLVVGSTGYIGRFVVKEMIKRGFNVIAVAREKSGIRGKNDKEETL 130

Query: 265 KELNGANVCFSDVTNLGFLQNA 330
           K+L GANVCFSDVT L  L+ +
Sbjct: 131 KQLQGANVCFSDVTELDVLEKS 152


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