BLASTX nr result

ID: Coptis24_contig00025880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025880
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136766.1| PREDICTED: uncharacterized protein LOC101211...   110   2e-22
emb|CBI32872.3| unnamed protein product [Vitis vinifera]              109   2e-22
ref|XP_002278800.1| PREDICTED: uncharacterized protein LOC100243...   109   2e-22
ref|XP_002519904.1| conserved hypothetical protein [Ricinus comm...   103   1e-20
ref|XP_002323216.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20

>ref|XP_004136766.1| PREDICTED: uncharacterized protein LOC101211236 [Cucumis sativus]
          Length = 419

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/138 (42%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
 Frame = -3

Query: 413 FGPFYLNTQKRWKKPVVSAQXXXXXXXXXXXXDKFTSQXXXXXXXXXLQE-MKSKWKGPF 237
           FGPF    QKRW+KP+V+AQ            DK  +Q         L E M ++ +GPF
Sbjct: 23  FGPFNHFCQKRWRKPIVNAQTRLEDRTRDLKLDKLATQLKKFRVILKLYELMNNRKRGPF 82

Query: 236 ISVQRLSRWKNIVGLNVGIGIFLHKYPHIFEIFMHPRKRSLCCKFSQXXXXXXXXXXXXX 57
           +S+Q +SRW+NIVG+ +GIG FLHKYPH+F++F HP +R+LCC+ +              
Sbjct: 83  VSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVRRNLCCRITGKMTALMKQEENVI 142

Query: 56  XXXXXXAVQRLKKLLTIS 3
                  VQRLKKLL +S
Sbjct: 143 NDMEIETVQRLKKLLMMS 160


>emb|CBI32872.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  109 bits (273), Expect = 2e-22
 Identities = 62/139 (44%), Positives = 76/139 (54%)
 Frame = -3

Query: 419 FRFGPFYLNTQKRWKKPVVSAQXXXXXXXXXXXXDKFTSQXXXXXXXXXLQEMKSKWKGP 240
           F FGPF    Q+RWKKP  +AQ            DK T+          LQ + SK +GP
Sbjct: 14  FPFGPFNSAMQRRWKKPADTAQTRLENRTRDSQLDKLTANLKRLATVLQLQHLISKRRGP 73

Query: 239 FISVQRLSRWKNIVGLNVGIGIFLHKYPHIFEIFMHPRKRSLCCKFSQXXXXXXXXXXXX 60
            +SVQ +SRWKNIVGLNV +G  L KYPHIFE+F HP KR+ CC+ S+            
Sbjct: 74  HVSVQIMSRWKNIVGLNVDMGQLLRKYPHIFEVFTHPVKRNQCCRVSRRMEDLMLQEEAA 133

Query: 59  XXXXXXXAVQRLKKLLTIS 3
                  AV+RLKKLL +S
Sbjct: 134 VKECELEAVRRLKKLLMMS 152


>ref|XP_002278800.1| PREDICTED: uncharacterized protein LOC100243149 [Vitis vinifera]
          Length = 441

 Score =  109 bits (273), Expect = 2e-22
 Identities = 62/139 (44%), Positives = 76/139 (54%)
 Frame = -3

Query: 419 FRFGPFYLNTQKRWKKPVVSAQXXXXXXXXXXXXDKFTSQXXXXXXXXXLQEMKSKWKGP 240
           F FGPF    Q+RWKKP  +AQ            DK T+          LQ + SK +GP
Sbjct: 14  FPFGPFNSAMQRRWKKPADTAQTRLENRTRDSQLDKLTANLKRLATVLQLQHLISKRRGP 73

Query: 239 FISVQRLSRWKNIVGLNVGIGIFLHKYPHIFEIFMHPRKRSLCCKFSQXXXXXXXXXXXX 60
            +SVQ +SRWKNIVGLNV +G  L KYPHIFE+F HP KR+ CC+ S+            
Sbjct: 74  HVSVQIMSRWKNIVGLNVDMGQLLRKYPHIFEVFTHPVKRNQCCRVSRRMEDLMLQEEAA 133

Query: 59  XXXXXXXAVQRLKKLLTIS 3
                  AV+RLKKLL +S
Sbjct: 134 VKECELEAVRRLKKLLMMS 152


>ref|XP_002519904.1| conserved hypothetical protein [Ricinus communis]
           gi|223540950|gb|EEF42508.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 447

 Score =  103 bits (258), Expect = 1e-20
 Identities = 57/138 (41%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
 Frame = -3

Query: 413 FGPFYLNTQKRWKKPVVSAQXXXXXXXXXXXXDKFTSQXXXXXXXXXLQEMKSKWK-GPF 237
           FGPF    QKRWKKP  +AQ            DK  +          + E+ S  K GPF
Sbjct: 22  FGPFNSFVQKRWKKPANTAQTRLENRTRDSKLDKLATDLKKLKTIYNIYELMSNRKRGPF 81

Query: 236 ISVQRLSRWKNIVGLNVGIGIFLHKYPHIFEIFMHPRKRSLCCKFSQXXXXXXXXXXXXX 57
           +S+Q +SRW NIVGLNVG+G F+ KYPH+FE+F HP +R+LCC+ ++             
Sbjct: 82  VSLQLMSRWSNIVGLNVGMGEFVQKYPHVFEVFTHPVRRNLCCRITKTMRDLIDEEVNIT 141

Query: 56  XXXXXXAVQRLKKLLTIS 3
                 AV R+KKLL +S
Sbjct: 142 KECEFRAVWRVKKLLMMS 159


>ref|XP_002323216.1| predicted protein [Populus trichocarpa] gi|222867846|gb|EEF04977.1|
           predicted protein [Populus trichocarpa]
          Length = 449

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/138 (38%), Positives = 76/138 (55%), Gaps = 1/138 (0%)
 Frame = -3

Query: 413 FGPFYLNTQKRWKKPVVSAQXXXXXXXXXXXXDKFTSQXXXXXXXXXLQEMKSKWK-GPF 237
           FGPF L  Q+RWKKP  +AQ            ++ T+          + E+ S  K GPF
Sbjct: 31  FGPFNLFIQRRWKKPANTAQTRLESRTIDSKLNRLTTYLKKLKTILKIYELMSNRKRGPF 90

Query: 236 ISVQRLSRWKNIVGLNVGIGIFLHKYPHIFEIFMHPRKRSLCCKFSQXXXXXXXXXXXXX 57
           +S+Q +SRW NIVGLNVG+G F+HK+PH+F++F HP +R+LCC+ S              
Sbjct: 91  VSLQLMSRWTNIVGLNVGMGEFVHKHPHVFDVFTHPVRRNLCCRISGKFKGLVSEEEGLV 150

Query: 56  XXXXXXAVQRLKKLLTIS 3
                   +R+K+LL +S
Sbjct: 151 KDCELECAKRVKRLLMMS 168


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