BLASTX nr result

ID: Coptis24_contig00025865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025865
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137687.1| PREDICTED: short-chain dehydrogenase reducta...   251   6e-65
ref|XP_002533789.1| short chain alcohol dehydrogenase, putative ...   250   2e-64
ref|XP_002323034.1| predicted protein [Populus trichocarpa] gi|2...   250   2e-64
ref|XP_003522143.1| PREDICTED: sex determination protein tassels...   248   5e-64
ref|XP_003522142.1| PREDICTED: sex determination protein tassels...   248   5e-64

>ref|XP_004137687.1| PREDICTED: short-chain dehydrogenase reductase 2a-like [Cucumis
           sativus] gi|449483589|ref|XP_004156632.1| PREDICTED:
           short-chain dehydrogenase reductase 2a-like [Cucumis
           sativus]
          Length = 308

 Score =  251 bits (642), Expect = 6e-65
 Identities = 127/164 (77%), Positives = 141/164 (85%)
 Frame = -1

Query: 619 VALGMKHAARVMMAKRTGCIISTASVAGVMGGLGPHAYTASKNAIVGLTKNAACELGRYG 440
           VALG+KHAARVM+ + TGCIISTASVAGV+GGLGPHAYTASK+AIVGLTKN ACELGRYG
Sbjct: 150 VALGIKHAARVMIPRATGCIISTASVAGVLGGLGPHAYTASKHAIVGLTKNTACELGRYG 209

Query: 439 IRVNCISPFGVATPMLINAWKKPXXXXXXXXDCMQVGRGSPYQEEVEKMEEFVRSLANLK 260
           IRVNCISPFGVAT ML+NAW+          +CM    G P   EV+KMEEFVR LANLK
Sbjct: 210 IRVNCISPFGVATSMLVNAWR---ADVEEEEECMNY--GVPSAAEVDKMEEFVRGLANLK 264

Query: 259 GPTLRPKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL 128
           GPTL+PKDIA+AALYLASDES+Y+SGHNLVVDGGVTTSRNC+GL
Sbjct: 265 GPTLKPKDIAQAALYLASDESKYISGHNLVVDGGVTTSRNCIGL 308


>ref|XP_002533789.1| short chain alcohol dehydrogenase, putative [Ricinus communis]
           gi|223526278|gb|EEF28591.1| short chain alcohol
           dehydrogenase, putative [Ricinus communis]
          Length = 303

 Score =  250 bits (638), Expect = 2e-64
 Identities = 128/164 (78%), Positives = 140/164 (85%)
 Frame = -1

Query: 619 VALGMKHAARVMMAKRTGCIISTASVAGVMGGLGPHAYTASKNAIVGLTKNAACELGRYG 440
           VALG+KHAARVM+ +  GCIISTASVAGVMGGLGPHAYTASK+AIVGLTKN ACELGRYG
Sbjct: 144 VALGIKHAARVMIPRGVGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNTACELGRYG 203

Query: 439 IRVNCISPFGVATPMLINAWKKPXXXXXXXXDCMQVGRGSPYQEEVEKMEEFVRSLANLK 260
           IRVNCISPFGVAT ML+NAW+          +CM    G P ++EVEKMEEFVR LANLK
Sbjct: 204 IRVNCISPFGVATSMLVNAWRS--SDDQEDDECMNF--GLPCEQEVEKMEEFVRGLANLK 259

Query: 259 GPTLRPKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL 128
           G TLR KDIAEAALYLASDES+YVSGHNLVVDGG+TTSRNC+GL
Sbjct: 260 GTTLRGKDIAEAALYLASDESKYVSGHNLVVDGGITTSRNCIGL 303


>ref|XP_002323034.1| predicted protein [Populus trichocarpa] gi|222867664|gb|EEF04795.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  250 bits (638), Expect = 2e-64
 Identities = 128/164 (78%), Positives = 141/164 (85%)
 Frame = -1

Query: 619 VALGMKHAARVMMAKRTGCIISTASVAGVMGGLGPHAYTASKNAIVGLTKNAACELGRYG 440
           VALG+KHAARVM+ +  GCIISTASVAGVMGGLGPHAYTASK+AIVGLTKN ACELGRYG
Sbjct: 148 VALGIKHAARVMIPRGVGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNTACELGRYG 207

Query: 439 IRVNCISPFGVATPMLINAWKKPXXXXXXXXDCMQVGRGSPYQEEVEKMEEFVRSLANLK 260
           IRVNCISPFGVAT ML+NAW+          DC+    G P ++EVEKME+FVR LANLK
Sbjct: 208 IRVNCISPFGVATSMLVNAWRS----GDEEEDCLNF--GLPCEKEVEKMEDFVRGLANLK 261

Query: 259 GPTLRPKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL 128
           GPTLR +DIAEAALYLASDES+YVSGHNLVVDGG+TTSRNCVGL
Sbjct: 262 GPTLRARDIAEAALYLASDESKYVSGHNLVVDGGITTSRNCVGL 305


>ref|XP_003522143.1| PREDICTED: sex determination protein tasselseed-2-like isoform 2
           [Glycine max]
          Length = 293

 Score =  248 bits (634), Expect = 5e-64
 Identities = 128/166 (77%), Positives = 139/166 (83%), Gaps = 2/166 (1%)
 Frame = -1

Query: 619 VALGMKHAARVMMAKRTGCIISTASVAGVMGGLGPHAYTASKNAIVGLTKNAACELGRYG 440
           +ALG+KHAARVM+ K  GCIISTASVAGVMGGLGPHAYTASK+AIVGLTKN ACELGRYG
Sbjct: 128 MALGIKHAARVMIPKGIGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNTACELGRYG 187

Query: 439 IRVNCISPFGVATPMLINAWKKPXXXXXXXXDCMQ--VGRGSPYQEEVEKMEEFVRSLAN 266
           IRVNCISPFGVAT ML+NAWK             +  +  G PYQEEVEKME FVR LAN
Sbjct: 188 IRVNCISPFGVATNMLVNAWKSGGGDDDDDDQGDEGIINFGLPYQEEVEKMEGFVRGLAN 247

Query: 265 LKGPTLRPKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL 128
           L+G TLR KDIAEAALYLASDES+YVSGHNLVVDGGVT+SRNC+GL
Sbjct: 248 LQGATLRAKDIAEAALYLASDESKYVSGHNLVVDGGVTSSRNCIGL 293


>ref|XP_003522142.1| PREDICTED: sex determination protein tasselseed-2-like isoform 1
           [Glycine max]
          Length = 311

 Score =  248 bits (634), Expect = 5e-64
 Identities = 128/166 (77%), Positives = 139/166 (83%), Gaps = 2/166 (1%)
 Frame = -1

Query: 619 VALGMKHAARVMMAKRTGCIISTASVAGVMGGLGPHAYTASKNAIVGLTKNAACELGRYG 440
           +ALG+KHAARVM+ K  GCIISTASVAGVMGGLGPHAYTASK+AIVGLTKN ACELGRYG
Sbjct: 146 MALGIKHAARVMIPKGIGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNTACELGRYG 205

Query: 439 IRVNCISPFGVATPMLINAWKKPXXXXXXXXDCMQ--VGRGSPYQEEVEKMEEFVRSLAN 266
           IRVNCISPFGVAT ML+NAWK             +  +  G PYQEEVEKME FVR LAN
Sbjct: 206 IRVNCISPFGVATNMLVNAWKSGGGDDDDDDQGDEGIINFGLPYQEEVEKMEGFVRGLAN 265

Query: 265 LKGPTLRPKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL 128
           L+G TLR KDIAEAALYLASDES+YVSGHNLVVDGGVT+SRNC+GL
Sbjct: 266 LQGATLRAKDIAEAALYLASDESKYVSGHNLVVDGGVTSSRNCIGL 311


Top