BLASTX nr result

ID: Coptis24_contig00025862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025862
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002866780.1| predicted protein [Arabidopsis lyrata subsp....    85   5e-15
ref|NP_201399.1| auxin efflux carrier family protein [Arabidopsi...    84   2e-14
dbj|BAJ99434.1| predicted protein [Hordeum vulgare subsp. vulgare]     84   2e-14
dbj|BAK01989.1| predicted protein [Hordeum vulgare subsp. vulgare]     84   2e-14
ref|XP_002521739.1| auxin:hydrogen symporter, putative [Ricinus ...    84   2e-14

>ref|XP_002866780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297312615|gb|EFH43039.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 395

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/61 (65%), Positives = 48/61 (78%)
 Frame = +2

Query: 5   HQMDMELLTPPTVAAIFGFIF*ATPWLKNLRIGDGAPLGVIQESIKLRGDGTMPCITLNL 184
           HQ+  EL  PPT+ AI GF+F AT WL+NL IG+ APL VIQ+S+KL GDGT+PCITL L
Sbjct: 227 HQILEELFAPPTIGAILGFVFGATNWLRNLIIGENAPLRVIQDSVKLLGDGTIPCITLIL 286

Query: 185 G 187
           G
Sbjct: 287 G 287


>ref|NP_201399.1| auxin efflux carrier family protein [Arabidopsis thaliana]
           gi|10177113|dbj|BAB10403.1| unnamed protein product
           [Arabidopsis thaliana] gi|332010751|gb|AED98134.1| auxin
           efflux carrier family protein [Arabidopsis thaliana]
          Length = 395

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/61 (63%), Positives = 48/61 (78%)
 Frame = +2

Query: 5   HQMDMELLTPPTVAAIFGFIF*ATPWLKNLRIGDGAPLGVIQESIKLRGDGTMPCITLNL 184
           HQ+  EL  PPT+ AI GF+F AT WL+NL IG+ APL VIQ+S+KL G+GT+PCITL L
Sbjct: 227 HQILEELFAPPTIGAILGFVFGATNWLRNLIIGENAPLRVIQDSVKLLGEGTIPCITLIL 286

Query: 185 G 187
           G
Sbjct: 287 G 287


>dbj|BAJ99434.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 377

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/61 (62%), Positives = 49/61 (80%)
 Frame = +2

Query: 5   HQMDMELLTPPTVAAIFGFIF*ATPWLKNLRIGDGAPLGVIQESIKLRGDGTMPCITLNL 184
           HQ+  EL+ PPT++AI GF+    PWLK+L IGDGAPL VIQ+S++L G+GT+PCITL L
Sbjct: 209 HQLVEELMAPPTISAIIGFVVGLVPWLKSLIIGDGAPLRVIQDSLELMGNGTIPCITLIL 268

Query: 185 G 187
           G
Sbjct: 269 G 269


>dbj|BAK01989.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 416

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/61 (62%), Positives = 49/61 (80%)
 Frame = +2

Query: 5   HQMDMELLTPPTVAAIFGFIF*ATPWLKNLRIGDGAPLGVIQESIKLRGDGTMPCITLNL 184
           HQ+  EL+ PPT++AI GF+    PWLK+L IGDGAPL VIQ+S++L G+GT+PCITL L
Sbjct: 248 HQLVEELMAPPTISAIIGFVVGLVPWLKSLIIGDGAPLRVIQDSLELMGNGTIPCITLIL 307

Query: 185 G 187
           G
Sbjct: 308 G 308


>ref|XP_002521739.1| auxin:hydrogen symporter, putative [Ricinus communis]
           gi|223539130|gb|EEF40726.1| auxin:hydrogen symporter,
           putative [Ricinus communis]
          Length = 406

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/60 (70%), Positives = 49/60 (81%)
 Frame = +2

Query: 8   QMDMELLTPPTVAAIFGFIF*ATPWLKNLRIGDGAPLGVIQESIKLRGDGTMPCITLNLG 187
           Q+  ELL PPT+AAIFGF+F AT +L+NL IG  APL VIQ+SIKL GDGT+PCITL LG
Sbjct: 239 QIMEELLAPPTIAAIFGFLFGATTFLRNLIIGSSAPLRVIQDSIKLLGDGTIPCITLILG 298


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