BLASTX nr result

ID: Coptis24_contig00025855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025855
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307782.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
ref|XP_003523127.1| PREDICTED: DUF246 domain-containing protein ...   124   6e-27
emb|CBI37793.3| unnamed protein product [Vitis vinifera]              124   8e-27
ref|XP_002278795.1| PREDICTED: DUF246 domain-containing protein ...   124   8e-27
ref|XP_004145535.1| PREDICTED: DUF246 domain-containing protein ...   123   1e-26

>ref|XP_002307782.1| predicted protein [Populus trichocarpa] gi|222857231|gb|EEE94778.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score =  125 bits (315), Expect = 3e-27
 Identities = 68/121 (56%), Positives = 84/121 (69%), Gaps = 1/121 (0%)
 Frame = -2

Query: 361 FGFISFLAPPPSPDNNDHQRHYIHHTTSLSNEVEIEKGN-GNRVFRVPIHGGSASGKDLW 185
           FG ++FLAP P   NN H ++ ++   + ++ VE   G  G  V  +PI G     +D+W
Sbjct: 32  FGLLTFLAPAPIDTNNPHHKNLMY---TANDVVEDTIGKPGEPVLHIPIKG--RKDRDVW 86

Query: 184 KSTLSKLYYGCSNASNKFAKAEVVTSSNRYLMIATSGGLNQQRTGITDAVVAARILNATL 5
            S  SK +YGCSNASNKF  A+ +T  NRYL+IATSGGLNQQRTGITDAVVAARILNATL
Sbjct: 87  SSRNSKYFYGCSNASNKFPNADAITHPNRYLLIATSGGLNQQRTGITDAVVAARILNATL 146

Query: 4   V 2
           V
Sbjct: 147 V 147


>ref|XP_003523127.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 568

 Score =  124 bits (312), Expect = 6e-27
 Identities = 69/120 (57%), Positives = 82/120 (68%)
 Frame = -2

Query: 361 FGFISFLAPPPSPDNNDHQRHYIHHTTSLSNEVEIEKGNGNRVFRVPIHGGSASGKDLWK 182
           F  +SFLAP P   +  H+R    HT+        +    N  FRVP  GG   G+D+W 
Sbjct: 32  FALLSFLAPSPVETDRIHRRR--QHTS--------DDAIDNPAFRVPGDGGKL-GRDIWS 80

Query: 181 STLSKLYYGCSNASNKFAKAEVVTSSNRYLMIATSGGLNQQRTGITDAVVAARILNATLV 2
           S  S+ ++GCSN+SNKF KA+V+T  NRYLMIATSGGLNQQRTGITDAVVAARILNATLV
Sbjct: 81  SLNSEHFFGCSNSSNKFQKAQVITQPNRYLMIATSGGLNQQRTGITDAVVAARILNATLV 140


>emb|CBI37793.3| unnamed protein product [Vitis vinifera]
          Length = 613

 Score =  124 bits (311), Expect = 8e-27
 Identities = 72/121 (59%), Positives = 82/121 (67%), Gaps = 1/121 (0%)
 Frame = -2

Query: 361 FGFISFLAPPPSPDNNDHQRHYIHHTTSLSNEVEIEKG-NGNRVFRVPIHGGSASGKDLW 185
           F   +FLAP P   N           +SLS+ +E +   + + VFRVP  GGS  G D+W
Sbjct: 79  FALFTFLAPAPISRNE----LLFRRNSSLSSGLEAQSSADRDVVFRVPATGGSL-GNDMW 133

Query: 184 KSTLSKLYYGCSNASNKFAKAEVVTSSNRYLMIATSGGLNQQRTGITDAVVAARILNATL 5
            S LSK YYGCSNAS KF+K  V T  NRYL+IATSGGLNQQRTGITDAVVAARILNATL
Sbjct: 134 TSRLSKFYYGCSNASVKFSKVGVSTQRNRYLLIATSGGLNQQRTGITDAVVAARILNATL 193

Query: 4   V 2
           V
Sbjct: 194 V 194


>ref|XP_002278795.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis
           vinifera]
          Length = 680

 Score =  124 bits (311), Expect = 8e-27
 Identities = 72/121 (59%), Positives = 82/121 (67%), Gaps = 1/121 (0%)
 Frame = -2

Query: 361 FGFISFLAPPPSPDNNDHQRHYIHHTTSLSNEVEIEKG-NGNRVFRVPIHGGSASGKDLW 185
           F   +FLAP P   N           +SLS+ +E +   + + VFRVP  GGS  G D+W
Sbjct: 132 FALFTFLAPAPISRNE----LLFRRNSSLSSGLEAQSSADRDVVFRVPATGGSL-GNDMW 186

Query: 184 KSTLSKLYYGCSNASNKFAKAEVVTSSNRYLMIATSGGLNQQRTGITDAVVAARILNATL 5
            S LSK YYGCSNAS KF+K  V T  NRYL+IATSGGLNQQRTGITDAVVAARILNATL
Sbjct: 187 TSRLSKFYYGCSNASVKFSKVGVSTQRNRYLLIATSGGLNQQRTGITDAVVAARILNATL 246

Query: 4   V 2
           V
Sbjct: 247 V 247


>ref|XP_004145535.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus]
          Length = 574

 Score =  123 bits (309), Expect = 1e-26
 Identities = 71/120 (59%), Positives = 84/120 (70%)
 Frame = -2

Query: 361 FGFISFLAPPPSPDNNDHQRHYIHHTTSLSNEVEIEKGNGNRVFRVPIHGGSASGKDLWK 182
           F  +SFLAP  SP+++ H R       + +++V I    G   FRVP   G+ SG+DLW 
Sbjct: 32  FALLSFLAP--SPNDSHHHRLIPPVQFNAASDVAI----GVSHFRVP-RNGARSGRDLWT 84

Query: 181 STLSKLYYGCSNASNKFAKAEVVTSSNRYLMIATSGGLNQQRTGITDAVVAARILNATLV 2
           S  +K Y GCSNASNKF KA  +T  NRYL+IATSGGLNQQRTGITDAVVAARILNATLV
Sbjct: 85  SRNAKFYSGCSNASNKFLKANAITHPNRYLLIATSGGLNQQRTGITDAVVAARILNATLV 144


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