BLASTX nr result
ID: Coptis24_contig00025852
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00025852 (286 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002325701.1| nbs-lrr resistance protein [Populus trichoca... 67 2e-09 ref|XP_002332538.1| BED finger-nbs-lrr resistance protein [Popul... 66 3e-09 ref|XP_002332020.1| BED finger-nbs-lrr resistance protein [Popul... 65 4e-09 ref|XP_002337475.1| predicted protein [Populus trichocarpa] gi|2... 64 1e-08 ref|XP_002333416.1| BED finger-nbs-lrr resistance protein [Popul... 64 1e-08 >ref|XP_002325701.1| nbs-lrr resistance protein [Populus trichocarpa] gi|222862576|gb|EEF00083.1| nbs-lrr resistance protein [Populus trichocarpa] Length = 1031 Score = 66.6 bits (161), Expect = 2e-09 Identities = 35/69 (50%), Positives = 48/69 (69%) Frame = +3 Query: 78 DNTFLYDISPSFFSKMFSLQVLDISCTGIAELPSSLSNLVCLHTLFLQQCTSLSKIPSVE 257 DN +L I+ SFF+++ L+VLD+S T I ELP S+S LV L L L+QC L +PS+E Sbjct: 540 DNPYLQFIADSFFTQLHGLKVLDLSRTEIIELPDSVSELVSLTALLLKQCEYLIHVPSLE 599 Query: 258 NLKALRFLN 284 L+ALR L+ Sbjct: 600 KLRALRRLD 608 >ref|XP_002332538.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa] gi|222832682|gb|EEE71159.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa] Length = 1139 Score = 65.9 bits (159), Expect = 3e-09 Identities = 33/68 (48%), Positives = 45/68 (66%) Frame = +3 Query: 81 NTFLYDISPSFFSKMFSLQVLDISCTGIAELPSSLSNLVCLHTLFLQQCTSLSKIPSVEN 260 N +L I+ SFF ++ L+VLD+SCTGI LP S+S+LV L L L C L +PS++ Sbjct: 714 NRWLGFIADSFFKQLHGLKVLDLSCTGIENLPDSVSDLVSLTALLLSHCDKLKHVPSLKK 773 Query: 261 LKALRFLN 284 L AL+ LN Sbjct: 774 LTALKRLN 781 >ref|XP_002332020.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa] gi|222875245|gb|EEF12376.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa] Length = 1093 Score = 65.5 bits (158), Expect = 4e-09 Identities = 32/69 (46%), Positives = 48/69 (69%) Frame = +3 Query: 78 DNTFLYDISPSFFSKMFSLQVLDISCTGIAELPSSLSNLVCLHTLFLQQCTSLSKIPSVE 257 DN L ++ SFF ++ L+VLD+SCTGI LP S+S+LV L L L++C +L +PS++ Sbjct: 666 DNRGLRFVADSFFKQLHGLKVLDLSCTGIENLPDSVSDLVSLTALLLKKCENLRHVPSLK 725 Query: 258 NLKALRFLN 284 L AL+ L+ Sbjct: 726 KLMALKRLD 734 >ref|XP_002337475.1| predicted protein [Populus trichocarpa] gi|222839429|gb|EEE77766.1| predicted protein [Populus trichocarpa] Length = 329 Score = 63.9 bits (154), Expect = 1e-08 Identities = 33/70 (47%), Positives = 46/70 (65%) Frame = +3 Query: 75 RDNTFLYDISPSFFSKMFSLQVLDISCTGIAELPSSLSNLVCLHTLFLQQCTSLSKIPSV 254 RDN L I+ SFF ++ L+VLD+SCT I LP S+S+L+ L L L C L +PS+ Sbjct: 80 RDNEGLRSIADSFFKQLHGLKVLDLSCTVIKNLPESVSDLMSLTALLLDGCWKLRYVPSL 139 Query: 255 ENLKALRFLN 284 + LKAL+ L+ Sbjct: 140 KKLKALKRLD 149 >ref|XP_002333416.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa] gi|222836514|gb|EEE74921.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa] Length = 900 Score = 63.9 bits (154), Expect = 1e-08 Identities = 32/70 (45%), Positives = 48/70 (68%) Frame = +3 Query: 75 RDNTFLYDISPSFFSKMFSLQVLDISCTGIAELPSSLSNLVCLHTLFLQQCTSLSKIPSV 254 RDN L ++ SFF ++ L+VLD+S GI LP S+S+LV L L L++C +L +PS+ Sbjct: 471 RDNDRLRFVADSFFKQLHGLKVLDLSYKGIENLPDSVSDLVSLTALLLKECENLRHVPSL 530 Query: 255 ENLKALRFLN 284 E L+AL+ L+ Sbjct: 531 EKLRALKRLD 540