BLASTX nr result

ID: Coptis24_contig00025852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025852
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325701.1| nbs-lrr resistance protein [Populus trichoca...    67   2e-09
ref|XP_002332538.1| BED finger-nbs-lrr resistance protein [Popul...    66   3e-09
ref|XP_002332020.1| BED finger-nbs-lrr resistance protein [Popul...    65   4e-09
ref|XP_002337475.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002333416.1| BED finger-nbs-lrr resistance protein [Popul...    64   1e-08

>ref|XP_002325701.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222862576|gb|EEF00083.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 1031

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/69 (50%), Positives = 48/69 (69%)
 Frame = +3

Query: 78  DNTFLYDISPSFFSKMFSLQVLDISCTGIAELPSSLSNLVCLHTLFLQQCTSLSKIPSVE 257
           DN +L  I+ SFF+++  L+VLD+S T I ELP S+S LV L  L L+QC  L  +PS+E
Sbjct: 540 DNPYLQFIADSFFTQLHGLKVLDLSRTEIIELPDSVSELVSLTALLLKQCEYLIHVPSLE 599

Query: 258 NLKALRFLN 284
            L+ALR L+
Sbjct: 600 KLRALRRLD 608


>ref|XP_002332538.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832682|gb|EEE71159.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1139

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/68 (48%), Positives = 45/68 (66%)
 Frame = +3

Query: 81  NTFLYDISPSFFSKMFSLQVLDISCTGIAELPSSLSNLVCLHTLFLQQCTSLSKIPSVEN 260
           N +L  I+ SFF ++  L+VLD+SCTGI  LP S+S+LV L  L L  C  L  +PS++ 
Sbjct: 714 NRWLGFIADSFFKQLHGLKVLDLSCTGIENLPDSVSDLVSLTALLLSHCDKLKHVPSLKK 773

Query: 261 LKALRFLN 284
           L AL+ LN
Sbjct: 774 LTALKRLN 781


>ref|XP_002332020.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222875245|gb|EEF12376.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1093

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/69 (46%), Positives = 48/69 (69%)
 Frame = +3

Query: 78  DNTFLYDISPSFFSKMFSLQVLDISCTGIAELPSSLSNLVCLHTLFLQQCTSLSKIPSVE 257
           DN  L  ++ SFF ++  L+VLD+SCTGI  LP S+S+LV L  L L++C +L  +PS++
Sbjct: 666 DNRGLRFVADSFFKQLHGLKVLDLSCTGIENLPDSVSDLVSLTALLLKKCENLRHVPSLK 725

Query: 258 NLKALRFLN 284
            L AL+ L+
Sbjct: 726 KLMALKRLD 734


>ref|XP_002337475.1| predicted protein [Populus trichocarpa] gi|222839429|gb|EEE77766.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/70 (47%), Positives = 46/70 (65%)
 Frame = +3

Query: 75  RDNTFLYDISPSFFSKMFSLQVLDISCTGIAELPSSLSNLVCLHTLFLQQCTSLSKIPSV 254
           RDN  L  I+ SFF ++  L+VLD+SCT I  LP S+S+L+ L  L L  C  L  +PS+
Sbjct: 80  RDNEGLRSIADSFFKQLHGLKVLDLSCTVIKNLPESVSDLMSLTALLLDGCWKLRYVPSL 139

Query: 255 ENLKALRFLN 284
           + LKAL+ L+
Sbjct: 140 KKLKALKRLD 149


>ref|XP_002333416.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222836514|gb|EEE74921.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 900

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/70 (45%), Positives = 48/70 (68%)
 Frame = +3

Query: 75  RDNTFLYDISPSFFSKMFSLQVLDISCTGIAELPSSLSNLVCLHTLFLQQCTSLSKIPSV 254
           RDN  L  ++ SFF ++  L+VLD+S  GI  LP S+S+LV L  L L++C +L  +PS+
Sbjct: 471 RDNDRLRFVADSFFKQLHGLKVLDLSYKGIENLPDSVSDLVSLTALLLKECENLRHVPSL 530

Query: 255 ENLKALRFLN 284
           E L+AL+ L+
Sbjct: 531 EKLRALKRLD 540


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