BLASTX nr result

ID: Coptis24_contig00025849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025849
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280416.1| PREDICTED: laccase-4 [Vitis vinifera] gi|297...   301   8e-80
ref|XP_002299828.1| predicted protein [Populus trichocarpa] gi|2...   288   7e-76
ref|XP_003544873.1| PREDICTED: laccase-4-like [Glycine max]           283   1e-74
ref|XP_002520425.1| laccase, putative [Ricinus communis] gi|2235...   283   2e-74
ref|XP_003518300.1| PREDICTED: laccase-4-like [Glycine max]           280   1e-73

>ref|XP_002280416.1| PREDICTED: laccase-4 [Vitis vinifera] gi|297745946|emb|CBI16002.3|
           unnamed protein product [Vitis vinifera]
          Length = 554

 Score =  301 bits (770), Expect = 8e-80
 Identities = 141/202 (69%), Positives = 160/202 (79%)
 Frame = +1

Query: 1   QYSGTLASSPTTLINPPPQNATPVATNFTDSLRSLNSKLYPTNVPLTADHSLLFTISLGI 180
           QYSGTL+S+PTT+ NPPPQNAT VAT FTDSLRSLNSK YP  VPL  DHSLLFT+ LGI
Sbjct: 302 QYSGTLSSTPTTITNPPPQNATSVATKFTDSLRSLNSKKYPARVPLATDHSLLFTVGLGI 361

Query: 181 NPCPTCPSGNRAVAGINNVSFIMPTTSLLQAHFFNLSGVFTDDFPGNPPVAFNYTGGTPP 360
           NPC TC +G + VA INNV+F+MPTT+LLQAH+F + GV+TDDFPGNPP+AFNYTG  P 
Sbjct: 362 NPCATCVNGGKVVANINNVTFVMPTTALLQAHYFKMKGVYTDDFPGNPPIAFNYTGTQP- 420

Query: 361 LNNLHTMIGTRLYRLAYNSTVQVVLQGTGLLAPENHPIHLHGFNFFVVGRGLGXXXXXXX 540
             N  TM GTRLYRLAYNSTVQ+VLQ TG++APE HP+HLHGFNFFV+GRGLG       
Sbjct: 421 -TNFQTMNGTRLYRLAYNSTVQLVLQDTGMIAPERHPVHLHGFNFFVIGRGLGNYNPKKD 479

Query: 541 XXXXXXXXXVERNTIGVPSGGW 606
                    VERNT+GVPSGGW
Sbjct: 480 PKKFNLVDPVERNTVGVPSGGW 501


>ref|XP_002299828.1| predicted protein [Populus trichocarpa] gi|222847086|gb|EEE84633.1|
           predicted protein [Populus trichocarpa]
          Length = 554

 Score =  288 bits (736), Expect = 7e-76
 Identities = 139/201 (69%), Positives = 154/201 (76%)
 Frame = +1

Query: 4   YSGTLASSPTTLINPPPQNATPVATNFTDSLRSLNSKLYPTNVPLTADHSLLFTISLGIN 183
           YSGTLAS+ TTL  PP QNATPVATNFTD+LRSLNS  YP  VPL  DHSL FTI LG+N
Sbjct: 303 YSGTLASTTTTLTVPPAQNATPVATNFTDALRSLNSIKYPARVPLKIDHSLFFTIGLGVN 362

Query: 184 PCPTCPSGNRAVAGINNVSFIMPTTSLLQAHFFNLSGVFTDDFPGNPPVAFNYTGGTPPL 363
           PC TC +GNR VA INNV+F+MPT +LLQAHFFN+ GVFTDDFPGNPP  FNYTG  P  
Sbjct: 363 PCATCVNGNRVVADINNVTFVMPTIALLQAHFFNIKGVFTDDFPGNPPTPFNYTGTQP-- 420

Query: 364 NNLHTMIGTRLYRLAYNSTVQVVLQGTGLLAPENHPIHLHGFNFFVVGRGLGXXXXXXXX 543
            N  T+ GT+LYRLAYNSTVQ+VLQ TG+L PENHP+HLHGFNFF VGRG+G        
Sbjct: 421 KNFQTVNGTKLYRLAYNSTVQLVLQDTGMLTPENHPVHLHGFNFFEVGRGIGNFNPKRDP 480

Query: 544 XXXXXXXXVERNTIGVPSGGW 606
                   VERNTIGVP+GGW
Sbjct: 481 KKFNLADPVERNTIGVPAGGW 501


>ref|XP_003544873.1| PREDICTED: laccase-4-like [Glycine max]
          Length = 554

 Score =  283 bits (725), Expect = 1e-74
 Identities = 135/201 (67%), Positives = 156/201 (77%)
 Frame = +1

Query: 4   YSGTLASSPTTLINPPPQNATPVATNFTDSLRSLNSKLYPTNVPLTADHSLLFTISLGIN 183
           Y+G+L S+ TTL + PP+NATPVATNFTDSLRSLNSK YP  VP   DHSL FT+SLG+N
Sbjct: 302 YTGSLGSTITTLTSLPPKNATPVATNFTDSLRSLNSKKYPARVPQKVDHSLFFTVSLGVN 361

Query: 184 PCPTCPSGNRAVAGINNVSFIMPTTSLLQAHFFNLSGVFTDDFPGNPPVAFNYTGGTPPL 363
           PCPTC +G++ VA INNV+F+MP  SLLQAHFFN+SGVFTDDFPG PPV +++TG   P 
Sbjct: 362 PCPTCANGSKVVAAINNVTFVMPKVSLLQAHFFNISGVFTDDFPGKPPVVYDFTGTQQP- 420

Query: 364 NNLHTMIGTRLYRLAYNSTVQVVLQGTGLLAPENHPIHLHGFNFFVVGRGLGXXXXXXXX 543
            NL T  GTR+YRLAYNSTVQ+VLQ TG++ PENHPIHLHGFNFFVVGRG G        
Sbjct: 421 TNLRTNRGTRVYRLAYNSTVQLVLQDTGMITPENHPIHLHGFNFFVVGRGQGNFNPKKDT 480

Query: 544 XXXXXXXXVERNTIGVPSGGW 606
                   VERNT+GVPSGGW
Sbjct: 481 KKFNLVDPVERNTVGVPSGGW 501


>ref|XP_002520425.1| laccase, putative [Ricinus communis] gi|223540267|gb|EEF41838.1|
           laccase, putative [Ricinus communis]
          Length = 556

 Score =  283 bits (723), Expect = 2e-74
 Identities = 136/201 (67%), Positives = 154/201 (76%)
 Frame = +1

Query: 4   YSGTLASSPTTLINPPPQNATPVATNFTDSLRSLNSKLYPTNVPLTADHSLLFTISLGIN 183
           YSGTL+SS TTL   PP+NAT +A+NFT++LRSLNSK YP NVPL  DHSL FTI LG+N
Sbjct: 305 YSGTLSSSATTLTATPPKNATSIASNFTNALRSLNSKKYPANVPLKIDHSLFFTIGLGVN 364

Query: 184 PCPTCPSGNRAVAGINNVSFIMPTTSLLQAHFFNLSGVFTDDFPGNPPVAFNYTGGTPPL 363
           PC TC +G+R VA INNV+F+MPT  LLQAHFFN+SGVFTDDFP NPPV++NYTG  P  
Sbjct: 365 PCATCVNGSRVVADINNVTFVMPTIGLLQAHFFNISGVFTDDFPSNPPVSYNYTGTQP-- 422

Query: 364 NNLHTMIGTRLYRLAYNSTVQVVLQGTGLLAPENHPIHLHGFNFFVVGRGLGXXXXXXXX 543
            N  T  GTRLYRLAYNSTVQ+VLQ TG++ PENHPIHLHGFNFF VGRG+G        
Sbjct: 423 TNFQTTTGTRLYRLAYNSTVQLVLQDTGMITPENHPIHLHGFNFFQVGRGVGNFNPKKDP 482

Query: 544 XXXXXXXXVERNTIGVPSGGW 606
                   VERNT GVPSGGW
Sbjct: 483 KNFNLVDPVERNTAGVPSGGW 503


>ref|XP_003518300.1| PREDICTED: laccase-4-like [Glycine max]
          Length = 557

 Score =  280 bits (717), Expect = 1e-73
 Identities = 134/201 (66%), Positives = 155/201 (77%)
 Frame = +1

Query: 4   YSGTLASSPTTLINPPPQNATPVATNFTDSLRSLNSKLYPTNVPLTADHSLLFTISLGIN 183
           Y+G+L S+ TTL + PP+NATPVATNFTDSLRSLNSK YP  VP   DHSL FTISLG+N
Sbjct: 305 YTGSLGSTITTLTSLPPKNATPVATNFTDSLRSLNSKKYPARVPQKVDHSLFFTISLGVN 364

Query: 184 PCPTCPSGNRAVAGINNVSFIMPTTSLLQAHFFNLSGVFTDDFPGNPPVAFNYTGGTPPL 363
           PCPTC +G++ VA INNV+F+MP  SLLQAHFFN+SGVF DDFPG PPV +++TG   P 
Sbjct: 365 PCPTCVNGSKVVAAINNVTFVMPKVSLLQAHFFNISGVFIDDFPGKPPVVYDFTGTQQP- 423

Query: 364 NNLHTMIGTRLYRLAYNSTVQVVLQGTGLLAPENHPIHLHGFNFFVVGRGLGXXXXXXXX 543
            NL T  GTR+YRLAYNSTVQ+VLQ TG++ PENHP+HLHGFNFFVVGRG G        
Sbjct: 424 TNLRTNRGTRVYRLAYNSTVQLVLQDTGMITPENHPLHLHGFNFFVVGRGQGNFNPKKDT 483

Query: 544 XXXXXXXXVERNTIGVPSGGW 606
                   VERNT+GVPSGGW
Sbjct: 484 KKFNLVDPVERNTVGVPSGGW 504


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