BLASTX nr result

ID: Coptis24_contig00025834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025834
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321091.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_003553105.1| PREDICTED: uncharacterized protein LOC100820...   117   1e-24
ref|XP_004152101.1| PREDICTED: 15-cis-zeta-carotene isomerase, c...   115   5e-24
ref|NP_001242088.1| uncharacterized protein LOC100793910 [Glycin...   115   5e-24
ref|XP_002267391.1| PREDICTED: 15-cis-zeta-carotene isomerase, c...   114   8e-24

>ref|XP_002321091.1| predicted protein [Populus trichocarpa] gi|222861864|gb|EEE99406.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/63 (85%), Positives = 60/63 (95%)
 Frame = -2

Query: 227 AFEVVKSRTSVVPFAAILDGRQKLPKDYYKEFLRLPYLTITAVTLGAYWAHPLMQAASYR 48
           AFE VK RTS+VPFAAILDGRQKLPKDYY+ FLRLPYL+ITA+TLGAY+AHPLMQAAS+R
Sbjct: 312 AFEAVKKRTSIVPFAAILDGRQKLPKDYYRXFLRLPYLSITALTLGAYFAHPLMQAASFR 371

Query: 47  LHW 39
           LHW
Sbjct: 372 LHW 374


>ref|XP_003553105.1| PREDICTED: uncharacterized protein LOC100820507 [Glycine max]
          Length = 374

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/62 (85%), Positives = 60/62 (96%)
 Frame = -2

Query: 224 FEVVKSRTSVVPFAAILDGRQKLPKDYYKEFLRLPYLTITAVTLGAYWAHPLMQAASYRL 45
           FE+VKSRTSVVPFAAILDGRQKLPKD+YKEF+RLPYLT+TA+TLGAY+AHPLMQ AS+ L
Sbjct: 313 FELVKSRTSVVPFAAILDGRQKLPKDFYKEFIRLPYLTVTALTLGAYFAHPLMQTASFNL 372

Query: 44  HW 39
           HW
Sbjct: 373 HW 374


>ref|XP_004152101.1| PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic-like
           [Cucumis sativus] gi|449521697|ref|XP_004167866.1|
           PREDICTED: 15-cis-zeta-carotene isomerase,
           chloroplastic-like [Cucumis sativus]
          Length = 372

 Score =  115 bits (287), Expect = 5e-24
 Identities = 52/62 (83%), Positives = 59/62 (95%)
 Frame = -2

Query: 224 FEVVKSRTSVVPFAAILDGRQKLPKDYYKEFLRLPYLTITAVTLGAYWAHPLMQAASYRL 45
           FE VKSRTS++PFAAI+DGRQKLP DYYKEFLRLPYL+ITA+T+GAY AHPLMQAAS+RL
Sbjct: 311 FEAVKSRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAYLAHPLMQAASFRL 370

Query: 44  HW 39
           HW
Sbjct: 371 HW 372


>ref|NP_001242088.1| uncharacterized protein LOC100793910 [Glycine max]
           gi|255639319|gb|ACU19957.1| unknown [Glycine max]
          Length = 369

 Score =  115 bits (287), Expect = 5e-24
 Identities = 51/62 (82%), Positives = 60/62 (96%)
 Frame = -2

Query: 224 FEVVKSRTSVVPFAAILDGRQKLPKDYYKEFLRLPYLTITAVTLGAYWAHPLMQAASYRL 45
           FE+V+SRTSVVPFAAILDGRQ+LPKD+YKEF+RLPYLT+T +TLGAY+AHPLMQAAS+ L
Sbjct: 308 FELVRSRTSVVPFAAILDGRQELPKDFYKEFIRLPYLTVTVITLGAYFAHPLMQAASFNL 367

Query: 44  HW 39
           HW
Sbjct: 368 HW 369


>ref|XP_002267391.1| PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic-like
           [Vitis vinifera]
          Length = 365

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/63 (82%), Positives = 59/63 (93%)
 Frame = -2

Query: 227 AFEVVKSRTSVVPFAAILDGRQKLPKDYYKEFLRLPYLTITAVTLGAYWAHPLMQAASYR 48
           AF+ V+ RTS++PFAAILDGRQKLPKDYYKEFLRLPYL+IT +TLGAY AHPLMQAAS+R
Sbjct: 303 AFDTVQRRTSIIPFAAILDGRQKLPKDYYKEFLRLPYLSITMLTLGAYLAHPLMQAASFR 362

Query: 47  LHW 39
           LHW
Sbjct: 363 LHW 365


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