BLASTX nr result

ID: Coptis24_contig00025832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025832
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298074.1| predicted protein [Populus trichocarpa] gi|2...   323   1e-86
ref|XP_003549865.1| PREDICTED: protein HOTHEAD-like [Glycine max]     317   1e-84
ref|XP_002509694.1| glucose-methanol-choline (gmc) oxidoreductas...   317   1e-84
ref|XP_003611165.1| Choline dehydrogenase [Medicago truncatula] ...   317   1e-84
ref|XP_003525734.1| PREDICTED: protein HOTHEAD-like [Glycine max]     315   4e-84

>ref|XP_002298074.1| predicted protein [Populus trichocarpa] gi|222845332|gb|EEE82879.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score =  323 bits (829), Expect = 1e-86
 Identities = 158/201 (78%), Positives = 176/201 (87%)
 Frame = +3

Query: 3   LAENSPTSPAQRFISEDGVFNARARVLGGGSCLNAGFYTRASLDYTKAAGWEGKLVNESY 182
           L++ SPTSP+QRFISEDGV NARARVLGGGSCLNAGFYTRAS +Y +AAGW+G+L NESY
Sbjct: 95  LSDPSPTSPSQRFISEDGVINARARVLGGGSCLNAGFYTRASPEYIRAAGWDGRLANESY 154

Query: 183 QWVEKIVAFEPPMLQWQSAVRDGLLEVGVTPYNGFTYDHILGTKVGGTIFDRNGHRHTAA 362
           QWVE+ VAFEP M  WQSAVRDGLLE GV P NGFTYDHI GTKVGGTIFDR G+RHTAA
Sbjct: 155 QWVERRVAFEPQMGPWQSAVRDGLLEAGVLPNNGFTYDHIKGTKVGGTIFDRAGNRHTAA 214

Query: 363 DLLEYANPKGLTVLLNATVHRILFSTKRNPKPAAHGVVFTDALGIMHRAYLNKGSMNEMI 542
           DLLEYANP GLTVLL+ATV++ILF+TK  PKP AHGVV+ DA G  HRAYL +G  NE+I
Sbjct: 215 DLLEYANPGGLTVLLHATVYKILFATKARPKPVAHGVVYRDASGAKHRAYLKRGLKNEII 274

Query: 543 ISAGALGSPQLLMLSGVGPAE 605
           IS+GALGSPQLLMLSGVGPA+
Sbjct: 275 ISSGALGSPQLLMLSGVGPAQ 295


>ref|XP_003549865.1| PREDICTED: protein HOTHEAD-like [Glycine max]
          Length = 581

 Score =  317 bits (812), Expect = 1e-84
 Identities = 152/201 (75%), Positives = 170/201 (84%)
 Frame = +3

Query: 3   LAENSPTSPAQRFISEDGVFNARARVLGGGSCLNAGFYTRASLDYTKAAGWEGKLVNESY 182
           L++ SPTSPAQRFISEDGV N+RARVLGGGSCLNAGFYTRAS  Y + AGW+G+ VNESY
Sbjct: 95  LSDTSPTSPAQRFISEDGVINSRARVLGGGSCLNAGFYTRASPQYVREAGWDGRAVNESY 154

Query: 183 QWVEKIVAFEPPMLQWQSAVRDGLLEVGVTPYNGFTYDHILGTKVGGTIFDRNGHRHTAA 362
           +WVEKIVAFEP + QWQSAVRDGL+E+GV P NGFTYDHI GTKVGGTIFD+NG RHTAA
Sbjct: 155 EWVEKIVAFEPQLKQWQSAVRDGLIEIGVVPNNGFTYDHIDGTKVGGTIFDQNGFRHTAA 214

Query: 363 DLLEYANPKGLTVLLNATVHRILFSTKRNPKPAAHGVVFTDALGIMHRAYLNKGSMNEMI 542
           DLLEYA P G+TVLL+ATVHRILF  K   KP AHGVVF D+LG  H+ YL     NE+I
Sbjct: 215 DLLEYAKPTGITVLLDATVHRILFRVKEGSKPTAHGVVFRDSLGGRHKVYLKADPRNEII 274

Query: 543 ISAGALGSPQLLMLSGVGPAE 605
           +SAGALGSPQLLMLSG+GP E
Sbjct: 275 VSAGALGSPQLLMLSGIGPRE 295


>ref|XP_002509694.1| glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus
           communis] gi|223549593|gb|EEF51081.1|
           glucose-methanol-choline (gmc) oxidoreductase, putative
           [Ricinus communis]
          Length = 548

 Score =  317 bits (812), Expect = 1e-84
 Identities = 153/200 (76%), Positives = 171/200 (85%)
 Frame = +3

Query: 3   LAENSPTSPAQRFISEDGVFNARARVLGGGSCLNAGFYTRASLDYTKAAGWEGKLVNESY 182
           L++ SPTSP+QRFISEDGV NARARVLGGGSCLNAGFYTRAS  Y +  GW+G+LVNESY
Sbjct: 99  LSDPSPTSPSQRFISEDGVINARARVLGGGSCLNAGFYTRASTAYVRTVGWDGRLVNESY 158

Query: 183 QWVEKIVAFEPPMLQWQSAVRDGLLEVGVTPYNGFTYDHILGTKVGGTIFDRNGHRHTAA 362
           QWVEKIVAFEP M QWQ+AVRDGLLE GV P NGFTYDH  GTKVGGTIFD++GHRH+AA
Sbjct: 159 QWVEKIVAFEPIMRQWQTAVRDGLLEAGVLPNNGFTYDHFNGTKVGGTIFDQDGHRHSAA 218

Query: 363 DLLEYANPKGLTVLLNATVHRILFSTKRNPKPAAHGVVFTDALGIMHRAYLNKGSMNEMI 542
           DLL YANP GLTVLL+A VH+ILF T+   +P AHGVVF DA G  HRAYL +G  NE+I
Sbjct: 219 DLLYYANPSGLTVLLHAPVHKILFRTQGKARPMAHGVVFRDASGAKHRAYLKRGPKNEII 278

Query: 543 ISAGALGSPQLLMLSGVGPA 602
           +SAGALGSPQLLM+SGVGPA
Sbjct: 279 VSAGALGSPQLLMISGVGPA 298


>ref|XP_003611165.1| Choline dehydrogenase [Medicago truncatula]
           gi|355512500|gb|AES94123.1| Choline dehydrogenase
           [Medicago truncatula]
          Length = 580

 Score =  317 bits (811), Expect = 1e-84
 Identities = 153/201 (76%), Positives = 174/201 (86%), Gaps = 3/201 (1%)
 Frame = +3

Query: 3   LAENSPTSPAQRFISEDGVFNARARVLGGGSCLNAGFYTRASLDYTKAAGWEGKLVNESY 182
           L++ SP+SPAQRFISEDGV N+RARVLGGGSCLNAGFYTRAS  Y + AGW+GKLVNESY
Sbjct: 97  LSDTSPSSPAQRFISEDGVINSRARVLGGGSCLNAGFYTRASPRYVREAGWDGKLVNESY 156

Query: 183 QWVEKIVAFEPPMLQWQSAVRDGLLEVGVTPYNGFTYDHILGTKVGGTIFDRNGHRHTAA 362
           +WVE++VAF P M QWQSAVRDGLLEVGV PYNGFTYDHI GTKVGGTIFD NGHRHTAA
Sbjct: 157 KWVERVVAFRPSMRQWQSAVRDGLLEVGVLPYNGFTYDHIHGTKVGGTIFDHNGHRHTAA 216

Query: 363 DLLEYANPKGLTVLLNATVHRILFST---KRNPKPAAHGVVFTDALGIMHRAYLNKGSMN 533
           DLLEYAN   +T+LL+ATVHRILF+T   + N +P AHGV++ DA G  HRAYLN G+ N
Sbjct: 217 DLLEYANTNTITLLLHATVHRILFTTHKERSNSRPVAHGVLYKDARGTEHRAYLNHGTKN 276

Query: 534 EMIISAGALGSPQLLMLSGVG 596
           E+I+SAGALGSPQLLMLSG+G
Sbjct: 277 EIIVSAGALGSPQLLMLSGIG 297


>ref|XP_003525734.1| PREDICTED: protein HOTHEAD-like [Glycine max]
          Length = 581

 Score =  315 bits (807), Expect = 4e-84
 Identities = 150/201 (74%), Positives = 172/201 (85%)
 Frame = +3

Query: 3   LAENSPTSPAQRFISEDGVFNARARVLGGGSCLNAGFYTRASLDYTKAAGWEGKLVNESY 182
           L++ SPTSPAQRFISEDGV N+RARVLGGGSCLNAGFYTRAS  Y + AGW+G++VNESY
Sbjct: 95  LSDTSPTSPAQRFISEDGVINSRARVLGGGSCLNAGFYTRASPQYVREAGWDGRVVNESY 154

Query: 183 QWVEKIVAFEPPMLQWQSAVRDGLLEVGVTPYNGFTYDHILGTKVGGTIFDRNGHRHTAA 362
           +WVEKIVAFEP + QWQS+VRDGL+E+GV P NGFTYDHI GTKVGGTIFD+NG RHTAA
Sbjct: 155 EWVEKIVAFEPQLKQWQSSVRDGLIEIGVVPNNGFTYDHIDGTKVGGTIFDQNGFRHTAA 214

Query: 363 DLLEYANPKGLTVLLNATVHRILFSTKRNPKPAAHGVVFTDALGIMHRAYLNKGSMNEMI 542
           DLL+YA P G+T+LL+ATVHRILF  K   KP AHGVVF D+LG  H+AYL     NE+I
Sbjct: 215 DLLQYAKPTGITLLLDATVHRILFRVKDRSKPMAHGVVFRDSLGRRHKAYLKPDPRNEII 274

Query: 543 ISAGALGSPQLLMLSGVGPAE 605
           +SAGALGSPQLLMLSG+GP E
Sbjct: 275 VSAGALGSPQLLMLSGIGPEE 295


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