BLASTX nr result

ID: Coptis24_contig00025831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025831
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBG76264.1| OO_Ba0005L10-OO_Ba0081K17.15 [Oryza officinalis]      118   5e-25
gb|EEC82097.1| hypothetical protein OsI_26104 [Oryza sativa Indi...   112   3e-23
ref|XP_003333301.1| terpenoid cylase/protein prenyltransferase a...   112   5e-23
dbj|BAD31045.1| ribosomal protein-like [Oryza sativa Japonica Gr...   111   9e-23
dbj|BAD23759.1| ribosomal protein-like [Oryza sativa Japonica Gr...   109   3e-22

>emb|CBG76264.1| OO_Ba0005L10-OO_Ba0081K17.15 [Oryza officinalis]
          Length = 203

 Score =  118 bits (296), Expect = 5e-25
 Identities = 68/165 (41%), Positives = 95/165 (57%), Gaps = 1/165 (0%)
 Frame = -1

Query: 494 RHFMHEQEVLTAAALAIQMNLVTAAHIIENSNQPTLRIG-YVPGRTYRNRNRATGNALLK 318
           RH + ++   +   + I    + A    E SN    R G  VPGR    RN   G   L+
Sbjct: 6   RHALLDESSSSDDDVIIAAAAIVAQDEYEQSNARRCRRGGSVPGRQVVRRNHQAGYERLQ 65

Query: 317 ADYFGVNPTYDEVLFRKRNRMSSHLFLRIRSGLKEHSDFWMKKYDAANKPGLSSHGKIMC 138
            DYF +NPTY  VLFR+R RMS HLFLRI + +  H D+++ K +AA+  G+S   KI  
Sbjct: 66  HDYFSLNPTYGPVLFRRRFRMSRHLFLRIVNDVVAHDDYFVLKRNAASALGISPLVKITA 125

Query: 137 ALQMLANGSPADSMDQYFRIAQSTTLSFVKMFCKHVVERFGAQYL 3
            L+M+ NG  AD+ D+Y +IA STT+  +K F + +VE FG +YL
Sbjct: 126 TLRMITNGVAADTQDEYLQIADSTTIESLKRFVRAIVEIFGDEYL 170


>gb|EEC82097.1| hypothetical protein OsI_26104 [Oryza sativa Indica Group]
          Length = 236

 Score =  112 bits (281), Expect = 3e-23
 Identities = 62/141 (43%), Positives = 86/141 (60%)
 Frame = -1

Query: 425 AAHIIENSNQPTLRIGYVPGRTYRNRNRATGNALLKADYFGVNPTYDEVLFRKRNRMSSH 246
           A  IIE S     RIG V G    +R+R   + LL  DYF  NPT+   +FR+R RM  H
Sbjct: 32  AQMIIEESVNNPGRIGSVHGHEVVHRDRLLWHNLLYKDYFSDNPTFGPNIFRRRFRMRIH 91

Query: 245 LFLRIRSGLKEHSDFWMKKYDAANKPGLSSHGKIMCALQMLANGSPADSMDQYFRIAQST 66
           +FLRI   ++EH D++ +K +AA   GLS   K++ A +MLA G PAD++D+Y RI +ST
Sbjct: 92  VFLRIMKAVEEHDDYFKQKRNAAGVLGLSCLQKVVAAFRMLAYGVPADALDEYIRIGEST 151

Query: 65  TLSFVKMFCKHVVERFGAQYL 3
            L  ++ F   VVE FG +Y+
Sbjct: 152 ALKALRKFVAAVVEVFGPEYM 172


>ref|XP_003333301.1| terpenoid cylase/protein prenyltransferase alpha-alpha toroid
           [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
          Length = 364

 Score =  112 bits (279), Expect = 5e-23
 Identities = 62/142 (43%), Positives = 85/142 (59%)
 Frame = -1

Query: 428 TAAHIIENSNQPTLRIGYVPGRTYRNRNRATGNALLKADYFGVNPTYDEVLFRKRNRMSS 249
           T   +I+  N+   R G   G+   NRNR  G+ LL  DYF   PTY E  FR+R RM  
Sbjct: 44  TVVLLIKRKNREIKRGGSTFGQKEINRNRLQGHELLFKDYFSDEPTYPEEFFRRRFRMRR 103

Query: 248 HLFLRIRSGLKEHSDFWMKKYDAANKPGLSSHGKIMCALQMLANGSPADSMDQYFRIAQS 69
            LFLRI + + E  D++++K DAA + G S   K   AL+MLA G  ADS+D+Y RI++S
Sbjct: 104 PLFLRIVNAIVEKDDYFVQKRDAAGRLGFSPLQKATAALRMLAYGYSADSIDEYLRISES 163

Query: 68  TTLSFVKMFCKHVVERFGAQYL 3
           T L  +K FC+ VV+ +  +YL
Sbjct: 164 TALESLKRFCRAVVDIYSNEYL 185


>dbj|BAD31045.1| ribosomal protein-like [Oryza sativa Japonica Group]
          Length = 258

 Score =  111 bits (277), Expect = 9e-23
 Identities = 62/141 (43%), Positives = 85/141 (60%)
 Frame = -1

Query: 425 AAHIIENSNQPTLRIGYVPGRTYRNRNRATGNALLKADYFGVNPTYDEVLFRKRNRMSSH 246
           A  IIE S     RIG V G    +R+R   + LL  DYF  NPT+   +FR+R RM  H
Sbjct: 54  AQMIIEESVNNPGRIGSVHGHEVVHRDRLLWHNLLYKDYFSDNPTFGPNIFRRRFRMRIH 113

Query: 245 LFLRIRSGLKEHSDFWMKKYDAANKPGLSSHGKIMCALQMLANGSPADSMDQYFRIAQST 66
           +FLRI   ++EH D++ +K +AA   GLS   K++ A  MLA G PAD++D+Y RI +ST
Sbjct: 114 VFLRIMKAVEEHDDYFKQKRNAAGVLGLSCLQKVVAAFCMLAYGVPADALDEYIRIGEST 173

Query: 65  TLSFVKMFCKHVVERFGAQYL 3
            L  ++ F   VVE FG +Y+
Sbjct: 174 ALEALRKFVAAVVEVFGPEYM 194


>dbj|BAD23759.1| ribosomal protein-like [Oryza sativa Japonica Group]
          Length = 916

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/126 (44%), Positives = 80/126 (63%)
 Frame = -1

Query: 380 GYVPGRTYRNRNRATGNALLKADYFGVNPTYDEVLFRKRNRMSSHLFLRIRSGLKEHSDF 201
           G V G    +RNR   +  L  DYF  NPTY  VLFR+RNRMS  LFLRI + +++H D+
Sbjct: 534 GSVMGHEVIDRNREARHLRLYQDYFSNNPTYGPVLFRRRNRMSRPLFLRIMNAIEDHDDY 593

Query: 200 WMKKYDAANKPGLSSHGKIMCALQMLANGSPADSMDQYFRIAQSTTLSFVKMFCKHVVER 21
           +++K +AA   G S H K+  A++ LA G  AD++D+Y  IA+ST +  ++ F K VV+ 
Sbjct: 594 FVQKRNAAGLIGFSCHQKVTAAMRQLAYGIAADALDEYLGIAESTAIESLRRFVKAVVQV 653

Query: 20  FGAQYL 3
           F  +YL
Sbjct: 654 FEHEYL 659


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