BLASTX nr result

ID: Coptis24_contig00025824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025824
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284399.1| PREDICTED: DUF246 domain-containing protein ...   129   3e-28
emb|CBI19065.3| unnamed protein product [Vitis vinifera]              129   3e-28
ref|XP_003544150.1| PREDICTED: DUF246 domain-containing protein ...   122   5e-26
ref|XP_004142690.1| PREDICTED: DUF246 domain-containing protein ...   117   2e-24
ref|XP_003614789.1| Growth regulator-related protein [Medicago t...   116   2e-24

>ref|XP_002284399.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis
           vinifera]
          Length = 585

 Score =  129 bits (324), Expect = 3e-28
 Identities = 59/98 (60%), Positives = 73/98 (74%), Gaps = 1/98 (1%)
 Frame = -3

Query: 550 GNFPHFLIGHRRFLYG-HAKTIKPDKRKLVLLLQDASISWETFKRHMGKMRVESDRDGIK 374
           GNFPHFL+GHRRFL+G HAKTI+PDKRKLV+LLQD  ISW+ FK  M  M +ESDR G+ 
Sbjct: 477 GNFPHFLMGHRRFLFGGHAKTIQPDKRKLVILLQDMDISWKAFKNEMESMLIESDRKGMN 536

Query: 373 IPKVRKANRDFPVYMYPSRECRCLQGPPNSTVGSTHIT 260
           +P+++K+ R   +Y YP  ECRCL    NST+  TH T
Sbjct: 537 VPRIKKSRRKSSIYTYPLPECRCLLESQNSTIKFTHTT 574


>emb|CBI19065.3| unnamed protein product [Vitis vinifera]
          Length = 585

 Score =  129 bits (324), Expect = 3e-28
 Identities = 59/98 (60%), Positives = 73/98 (74%), Gaps = 1/98 (1%)
 Frame = -3

Query: 550 GNFPHFLIGHRRFLYG-HAKTIKPDKRKLVLLLQDASISWETFKRHMGKMRVESDRDGIK 374
           GNFPHFL+GHRRFL+G HAKTI+PDKRKLV+LLQD  ISW+ FK  M  M +ESDR G+ 
Sbjct: 477 GNFPHFLMGHRRFLFGGHAKTIQPDKRKLVILLQDMDISWKAFKNEMESMLIESDRKGMN 536

Query: 373 IPKVRKANRDFPVYMYPSRECRCLQGPPNSTVGSTHIT 260
           +P+++K+ R   +Y YP  ECRCL    NST+  TH T
Sbjct: 537 VPRIKKSRRKSSIYTYPLPECRCLLESQNSTIKFTHTT 574


>ref|XP_003544150.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 592

 Score =  122 bits (305), Expect = 5e-26
 Identities = 59/85 (69%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
 Frame = -3

Query: 550 GNFPHFLIGHRRFLY-GHAKTIKPDKRKLVLLLQDASISWETFKRHMGKMRVESDRDGIK 374
           GNFPHFL+GHRRF+Y GHAKTI PDKRKLV+LL D SISW  FK  M  M  ESDR GI 
Sbjct: 486 GNFPHFLMGHRRFIYDGHAKTIIPDKRKLVVLLDDVSISWRAFKDQMEDMLTESDRKGIM 545

Query: 373 IPKVRKANRDFPVYMYPSRECRCLQ 299
           +P+VRK NR   VY YP  ECRCLQ
Sbjct: 546 VPRVRKINRKTSVYTYPLPECRCLQ 570


>ref|XP_004142690.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus] gi|449519673|ref|XP_004166859.1| PREDICTED:
           DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus]
          Length = 587

 Score =  117 bits (292), Expect = 2e-24
 Identities = 56/90 (62%), Positives = 66/90 (73%), Gaps = 2/90 (2%)
 Frame = -3

Query: 550 GNFPHFLIGHRRFLY-GHAKTIKPDKRKLVLLLQDA-SISWETFKRHMGKMRVESDRDGI 377
           GNFPHFL+GHRRFLY GHAKTIKPDKRKL +L+ D   +SW+ FK  MG M  ESDR G+
Sbjct: 480 GNFPHFLMGHRRFLYDGHAKTIKPDKRKLAILMDDRIKLSWKEFKEQMGVMLSESDRKGL 539

Query: 376 KIPKVRKANRDFPVYMYPSRECRCLQGPPN 287
            +P++R+ NR   VY YP  ECRCLQ   N
Sbjct: 540 MVPRIRRFNRKTSVYTYPLPECRCLQKSHN 569


>ref|XP_003614789.1| Growth regulator-related protein [Medicago truncatula]
           gi|355516124|gb|AES97747.1| Growth regulator-related
           protein [Medicago truncatula]
          Length = 589

 Score =  116 bits (291), Expect = 2e-24
 Identities = 62/103 (60%), Positives = 69/103 (66%), Gaps = 3/103 (2%)
 Frame = -3

Query: 550 GNFPHFLIGHRRFLYG-HAKTIKPDKRKLVLLLQDASISWETFKRHMGKMRVESDRDGIK 374
           GNFPHFL+GHRRFLYG HAKTI PDKRKLV+L ++ +ISW   K  M  M  ESDR GI 
Sbjct: 477 GNFPHFLMGHRRFLYGGHAKTIIPDKRKLVVLFENTTISWSALKDQMDDMLSESDRKGIM 536

Query: 373 IPKVRKANRDFPVYMYPSRECRCLQGPPNSTVGST--HITSIP 251
           +P+VRK NR   VY YP  ECRCLQ    S V  T  H   IP
Sbjct: 537 VPRVRKINRKTSVYTYPLPECRCLQ---ESLVNKTIDHNVDIP 576


Top