BLASTX nr result

ID: Coptis24_contig00025823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025823
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299440.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_002273163.2| PREDICTED: uncharacterized basic helix-loop-...    58   7e-07
emb|CBI34563.3| unnamed protein product [Vitis vinifera]               58   7e-07
emb|CAN74602.1| hypothetical protein VITISV_028112 [Vitis vinifera]    58   7e-07

>ref|XP_002299440.1| predicted protein [Populus trichocarpa] gi|222846698|gb|EEE84245.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 37/89 (41%), Positives = 51/89 (57%)
 Frame = -3

Query: 337 ADSDLFDTLGLDFEQGQRLECWDDYTFXXXXXXXXXXXXXXSDCISDLDVGSTAGPQKGF 158
           A++DLF+ LGL F  GQ   CW+D                 S+CIS+LDVGS  GPQKG 
Sbjct: 57  AENDLFEGLGLVFRGGQTGHCWEDMMMPVARSGQITASTGVSECISELDVGSKVGPQKGL 116

Query: 157 LVDPRLEQLLDGVTCNTSDSGPSLQDRLS 71
             +  LE+LLD V+ ++  +  S+ D+LS
Sbjct: 117 FSELGLEELLDSVSNSSYVTKYSIDDQLS 145


>ref|XP_002273163.2| PREDICTED: uncharacterized basic helix-loop-helix protein
           At1g64625-like [Vitis vinifera]
          Length = 858

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/77 (41%), Positives = 43/77 (55%)
 Frame = -3

Query: 334 DSDLFDTLGLDFEQGQRLECWDDYTFXXXXXXXXXXXXXXSDCISDLDVGSTAGPQKGFL 155
           ++DLFD LGLDF      E W+D+                S+CIS+LDVGS A P+KG  
Sbjct: 469 ENDLFDGLGLDFGFELAGESWEDFIMPLFNDGQSTLSTGVSECISELDVGSMAVPRKGLF 528

Query: 154 VDPRLEQLLDGVTCNTS 104
            +  L+QLLD +  N+S
Sbjct: 529 SELGLDQLLDDIVGNSS 545


>emb|CBI34563.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/77 (41%), Positives = 43/77 (55%)
 Frame = -3

Query: 334 DSDLFDTLGLDFEQGQRLECWDDYTFXXXXXXXXXXXXXXSDCISDLDVGSTAGPQKGFL 155
           ++DLFD LGLDF      E W+D+                S+CIS+LDVGS A P+KG  
Sbjct: 490 ENDLFDGLGLDFGFELAGESWEDFIMPLFNDGQSTLSTGVSECISELDVGSMAVPRKGLF 549

Query: 154 VDPRLEQLLDGVTCNTS 104
            +  L+QLLD +  N+S
Sbjct: 550 SELGLDQLLDDIVGNSS 566


>emb|CAN74602.1| hypothetical protein VITISV_028112 [Vitis vinifera]
          Length = 893

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/77 (41%), Positives = 43/77 (55%)
 Frame = -3

Query: 334 DSDLFDTLGLDFEQGQRLECWDDYTFXXXXXXXXXXXXXXSDCISDLDVGSTAGPQKGFL 155
           ++DLFD LGLDF      E W+D+                S+CIS+LDVGS A P+KG  
Sbjct: 490 ENDLFDGLGLDFGFELAGESWEDFIMPLFNDGQSTLSTGVSECISELDVGSMAVPRKGLF 549

Query: 154 VDPRLEQLLDGVTCNTS 104
            +  L+QLLD +  N+S
Sbjct: 550 SELGLDQLLDDIVGNSS 566


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