BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025807
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281441.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT...   238   1e-60
ref|XP_002522996.1| conserved hypothetical protein [Ricinus comm...   237   2e-60
ref|XP_002319824.1| predicted protein [Populus trichocarpa] gi|2...   237   2e-60
emb|CAN65357.1| hypothetical protein VITISV_041274 [Vitis vinifera]   237   2e-60
gb|ABK94006.1| unknown [Populus trichocarpa]                          234   1e-59

>ref|XP_002281441.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT [Vitis vinifera]
           gi|297735982|emb|CBI23956.3| unnamed protein product
           [Vitis vinifera]
          Length = 172

 Score =  238 bits (606), Expect = 1e-60
 Identities = 124/176 (70%), Positives = 138/176 (78%), Gaps = 4/176 (2%)
 Frame = +2

Query: 68  MASISCTFHPTFPC----SSSSRWKTSCQFLGNGRKLGWFKVCSVRSIIGPTNGSKTKCW 235
           MASI CT H  F      S S+    + Q LG  RKL W    S  + +GP+NGS+  CW
Sbjct: 1   MASIPCTTHLLFTSKPQISPSNPPIFTSQLLGIPRKLSW----STPTRLGPSNGSRATCW 56

Query: 236 FKFGKNGVDAEGAGIYGSQSREDFDRDDVEQYFNYMGMLAVEGTYDKMEALLQLDIHPVD 415
           F+FG  GVDAEGAGIYGSQ+R+DFDRDDVEQYFNYMGMLAVEGTYDKMEALL  +IHPVD
Sbjct: 57  FRFGNRGVDAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVD 116

Query: 416 ILLMMAASEGDKPKIEELLRAGASYTVKDVDGRTAIDRAANEEIKQFILEFSVQKA 583
           ILLMMAASEGD+PKIEELLRAGASYTVKD DGRTA++RAAN+EIK  IL FS QKA
Sbjct: 117 ILLMMAASEGDQPKIEELLRAGASYTVKDADGRTALERAANDEIKDLILNFSTQKA 172


>ref|XP_002522996.1| conserved hypothetical protein [Ricinus communis]
           gi|223537808|gb|EEF39426.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 175

 Score =  237 bits (605), Expect = 2e-60
 Identities = 134/183 (73%), Positives = 144/183 (78%), Gaps = 11/183 (6%)
 Frame = +2

Query: 68  MASI---SCTFHPTFPCSSSSRWKT-------SCQFLGNGRKLGWFKVCSVRSI-IGPTN 214
           MASI   SCT H T P +   + KT       S  FLG   K     VC VR   IGP+N
Sbjct: 1   MASIPSSSCTAH-TLPITCKPQ-KTATFLPNFSTPFLGTKSK-----VCLVRPCRIGPSN 53

Query: 215 GSKTKCWFKFGKNGVDAEGAGIYGSQSREDFDRDDVEQYFNYMGMLAVEGTYDKMEALLQ 394
           GS+ KCWFKFGKNGVDAEGAGIYGSQSR+DFDRDDVEQYFNYMGMLAVEGTYDKMEALL 
Sbjct: 54  GSRVKCWFKFGKNGVDAEGAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLS 113

Query: 395 LDIHPVDILLMMAASEGDKPKIEELLRAGASYTVKDVDGRTAIDRAANEEIKQFILEFSV 574
            DIHPVDILLM+AASEGDKPKIEELLRAGASY VKD DGRTA+DR ANEEI++FI+ FSV
Sbjct: 114 QDIHPVDILLMLAASEGDKPKIEELLRAGASYNVKDADGRTALDR-ANEEIREFIVGFSV 172

Query: 575 QKA 583
           QKA
Sbjct: 173 QKA 175


>ref|XP_002319824.1| predicted protein [Populus trichocarpa] gi|222858200|gb|EEE95747.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  237 bits (605), Expect = 2e-60
 Identities = 124/176 (70%), Positives = 137/176 (77%), Gaps = 4/176 (2%)
 Frame = +2

Query: 68  MASISCTFHPTFPCSSSSRW----KTSCQFLGNGRKLGWFKVCSVRSIIGPTNGSKTKCW 235
           MASI  T H T   +  S      K + QFLG    +GW + C     IGP+NGS+ KCW
Sbjct: 1   MASILSTTHLTLASNPQSSQPFLPKLNSQFLGLQSNVGWLRPCR----IGPSNGSRAKCW 56

Query: 236 FKFGKNGVDAEGAGIYGSQSREDFDRDDVEQYFNYMGMLAVEGTYDKMEALLQLDIHPVD 415
           FKFGKNGVDAEGAGIYGSQ+R+DFDRDDVEQYFNYMGMLAVEGTYDKMEALL  +IHPVD
Sbjct: 57  FKFGKNGVDAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVD 116

Query: 416 ILLMMAASEGDKPKIEELLRAGASYTVKDVDGRTAIDRAANEEIKQFILEFSVQKA 583
           ILLM+AASEGDKPKIEELLRAGA Y +KD DGRTA+DR ANEE K FIL  SV+KA
Sbjct: 117 ILLMLAASEGDKPKIEELLRAGAGYDIKDADGRTALDR-ANEETKDFILGLSVRKA 171


>emb|CAN65357.1| hypothetical protein VITISV_041274 [Vitis vinifera]
          Length = 172

 Score =  237 bits (605), Expect = 2e-60
 Identities = 124/176 (70%), Positives = 138/176 (78%), Gaps = 4/176 (2%)
 Frame = +2

Query: 68  MASISCTFHPTFPC----SSSSRWKTSCQFLGNGRKLGWFKVCSVRSIIGPTNGSKTKCW 235
           MASI CT H  F      S S+    + Q LG  RKL W    S  + +GP+NGS+  CW
Sbjct: 1   MASIPCTTHLLFTSKPQISPSNPPIFTSQXLGIPRKLSW----STPTRLGPSNGSRATCW 56

Query: 236 FKFGKNGVDAEGAGIYGSQSREDFDRDDVEQYFNYMGMLAVEGTYDKMEALLQLDIHPVD 415
           F+FG  GVDAEGAGIYGSQ+R+DFDRDDVEQYFNYMGMLAVEGTYDKMEALL  +IHPVD
Sbjct: 57  FRFGNRGVDAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVD 116

Query: 416 ILLMMAASEGDKPKIEELLRAGASYTVKDVDGRTAIDRAANEEIKQFILEFSVQKA 583
           ILLMMAASEGD+PKIEELLRAGASYTVKD DGRTA++RAAN+EIK  IL FS QKA
Sbjct: 117 ILLMMAASEGDQPKIEELLRAGASYTVKDADGRTALERAANDEIKDLILNFSTQKA 172


>gb|ABK94006.1| unknown [Populus trichocarpa]
          Length = 171

 Score =  234 bits (597), Expect = 1e-59
 Identities = 123/176 (69%), Positives = 136/176 (77%), Gaps = 4/176 (2%)
 Frame = +2

Query: 68  MASISCTFHPTFPCSSSSRW----KTSCQFLGNGRKLGWFKVCSVRSIIGPTNGSKTKCW 235
           MASI  T H T   +  S      K + QFLG    +GW + C     IGP+NGS+ KCW
Sbjct: 1   MASILSTTHLTLASNPQSSQPFLPKLNSQFLGLQSNVGWLRPCR----IGPSNGSRAKCW 56

Query: 236 FKFGKNGVDAEGAGIYGSQSREDFDRDDVEQYFNYMGMLAVEGTYDKMEALLQLDIHPVD 415
           FKFGKNGVDAEG GIYGSQ+R+DFDRDDVEQYFNYMGMLAVEGTYDKMEALL  +IHPVD
Sbjct: 57  FKFGKNGVDAEGDGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVD 116

Query: 416 ILLMMAASEGDKPKIEELLRAGASYTVKDVDGRTAIDRAANEEIKQFILEFSVQKA 583
           ILLM+AASEGDKPKIEELLRAGA Y +KD DGRTA+DR ANEE K FIL  SV+KA
Sbjct: 117 ILLMLAASEGDKPKIEELLRAGAVYDIKDADGRTALDR-ANEETKDFILGLSVRKA 171