BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025802
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containi...   260   1e-67
emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]   260   1e-67
ref|XP_002310674.1| predicted protein [Populus trichocarpa] gi|2...   224   6e-57
ref|XP_002513375.1| pentatricopeptide repeat-containing protein,...   219   3e-55
ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containi...   214   6e-54

>ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  260 bits (665), Expect = 1e-67
 Identities = 123/193 (63%), Positives = 150/193 (77%)
 Frame = -2

Query: 581  GISANYITIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNS 402
            GI ANYIT+V+VLG+ SA +DLL +GM +HAH V+TGFE D YV+NSL+TMYAKCGDLNS
Sbjct: 1245 GIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNS 1304

Query: 401  SNFIFERLDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQXXXXXXXXXXXX 222
            SN+IF+ L  ++ ++WNAM+AANAHHGCGE+ALK+F +M    ++ DQ            
Sbjct: 1305 SNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATAN 1364

Query: 221  XXXXXXGQQLHNLIIKTGFDSDLHVTNAAMDMYGKCGEMEEVLQMLPSPSNRSRLSWNIL 42
                  GQQLH L+IK GF+SDLHVTNAAMDMYGKCGEM +VL+MLP P NRSRLSWNIL
Sbjct: 1365 LAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNIL 1424

Query: 41   ISGFSRHGYFEKA 3
            IS F+RHG F+KA
Sbjct: 1425 ISAFARHGCFQKA 1437



 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 50/188 (26%), Positives = 92/188 (48%)
 Frame = -2

Query: 581  GISANYITIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNS 402
            G+S N  T   V  S    ED +  G  V  H +  GFE    V NSL++M++    +  
Sbjct: 942  GVSGNQNTFATVTSSCGLLEDQV-LGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEE 1000

Query: 401  SNFIFERLDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQXXXXXXXXXXXX 222
            + ++F+ ++  + +SWNAMI+A AHHG   ++L+ F  M     + +             
Sbjct: 1001 ACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSS 1060

Query: 221  XXXXXXGQQLHNLIIKTGFDSDLHVTNAAMDMYGKCGEMEEVLQMLPSPSNRSRLSWNIL 42
                  G+ +H L++K G DS++ + N  + +Y + G  E+   +  + + R  +SWN +
Sbjct: 1061 VDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSM 1120

Query: 41   ISGFSRHG 18
            ++ + + G
Sbjct: 1121 MACYVQDG 1128



 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 3/183 (1%)
 Frame = -2

Query: 560  TIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNSSNFIFER 381
            T ++ L S  +S D L +G  +H   V  G + +  + N+LLT+Y++ G    +  +F+ 
Sbjct: 1049 TTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQA 1108

Query: 380  LDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQXXXXXXXXXXXXXXXXXXG 201
            +  ++ +SWN+M+A     G   D LK+ A++ +     +                    
Sbjct: 1109 MTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIES 1168

Query: 200  QQLHNLIIKTGFDSDLHVTNAAMDMYGKCG---EMEEVLQMLPSPSNRSRLSWNILISGF 30
            + +H LII  GF   L V NA + MYGK G   E ++VLQ +P P    R++WN LI G 
Sbjct: 1169 KIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQP---DRVTWNALIGGH 1225

Query: 29   SRH 21
            + +
Sbjct: 1226 AEN 1228



 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 45/164 (27%), Positives = 79/164 (48%)
 Frame = -2

Query: 506 GMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNSSNFIFERLDTQNAVSWNAMIAANAH 327
           G  +H H +  GF  D ++   L+  Y K GD+ ++  +F+ +  ++ VSW AM++  + 
Sbjct: 49  GHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQ 108

Query: 326 HGCGEDALKLFAKMHRARLDFDQXXXXXXXXXXXXXXXXXXGQQLHNLIIKTGFDSDLHV 147
           +G  E A  LF+ M    +  +Q                  G Q+   I K  F  +L V
Sbjct: 109 NGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFV 168

Query: 146 TNAAMDMYGKCGEMEEVLQMLPSPSNRSRLSWNILISGFSRHGY 15
            +A +D + KCG+ME+   +  +   R  +SWN +I G++  G+
Sbjct: 169 KSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGF 212



 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 50/190 (26%), Positives = 93/190 (48%), Gaps = 1/190 (0%)
 Frame = -2

Query: 569  NYITIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNSSNFI 390
            N++T  + L + S  E L+   + VHA  ++ GF     V N+L+TMY K G +  +  +
Sbjct: 1148 NHVTFASALAACSNPECLIESKI-VHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKV 1206

Query: 389  FERLDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQ-XXXXXXXXXXXXXXX 213
             + +   + V+WNA+I  +A +    +A+K +  +    +  +                 
Sbjct: 1207 LQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDL 1266

Query: 212  XXXGQQLHNLIIKTGFDSDLHVTNAAMDMYGKCGEMEEVLQMLPSPSNRSRLSWNILISG 33
               G  +H  I+ TGF+SD +V N+ + MY KCG++     +     N+S ++WN +++ 
Sbjct: 1267 LKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAA 1326

Query: 32   FSRHGYFEKA 3
             + HG  E+A
Sbjct: 1327 NAHHGCGEEA 1336



 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 44/188 (23%), Positives = 84/188 (44%)
 Frame = -2

Query: 581  GISANYITIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNS 402
            G+  N   + +++ + S S  + + G  VH   V TG   D YV  +L+  Y   G + +
Sbjct: 840  GVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYN 899

Query: 401  SNFIFERLDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQXXXXXXXXXXXX 222
            +  +FE +   N VSW +++   +  G   + L ++ +M +  +  +Q            
Sbjct: 900  AQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGL 959

Query: 221  XXXXXXGQQLHNLIIKTGFDSDLHVTNAAMDMYGKCGEMEEVLQMLPSPSNRSRLSWNIL 42
                  G Q+   II+ GF+  + V N+ + M+     +EE   +    +    +SWN +
Sbjct: 960  LEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAM 1019

Query: 41   ISGFSRHG 18
            IS ++ HG
Sbjct: 1020 ISAYAHHG 1027



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 45/190 (23%), Positives = 85/190 (44%)
 Frame = -2

Query: 581 GISANYITIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNS 402
           G+ AN  T  + L + ++    L+ G+ V        F ++ +V+++L+  ++KCG +  
Sbjct: 126 GVKANQFTYGSALRACTSLR-CLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMED 184

Query: 401 SNFIFERLDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQXXXXXXXXXXXX 222
           ++++F  +  ++ VSWNAMI   A  G  +D+  +F  M R  L  D             
Sbjct: 185 ASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAE 244

Query: 221 XXXXXXGQQLHNLIIKTGFDSDLHVTNAAMDMYGKCGEMEEVLQMLPSPSNRSRLSWNIL 42
                   Q+H +I + G+ S   VT   ++ Y K G +     +      +   S   L
Sbjct: 245 GGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTAL 304

Query: 41  ISGFSRHGYF 12
           I+G++  G +
Sbjct: 305 ITGYAHEGIY 314



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 6/186 (3%)
 Frame = -2

Query: 542  GSFSASEDL--LNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNSSNFIFERLDTQ 369
            G  +A+ +L  L  G  +H   +  GFE D +V N+ + MY KCG+++    +  +   +
Sbjct: 1357 GGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINR 1416

Query: 368  NAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQXXXXXXXXXXXXXXXXXXGQQLH 189
            + +SWN +I+A A HGC + A + F +M +     D                   G   +
Sbjct: 1417 SRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYY 1476

Query: 188  NLIIKT-GFDSDLHVTNAAMDMYGKCGEM---EEVLQMLPSPSNRSRLSWNILISGFSRH 21
            + + +  G    +      +D+ G+ G +   E  ++ +P P N   L+W  L++    H
Sbjct: 1477 DSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPN--DLAWRSLLAACRIH 1534

Query: 20   GYFEKA 3
            G  E A
Sbjct: 1535 GNLELA 1540



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 37/166 (22%), Positives = 71/166 (42%), Gaps = 2/166 (1%)
 Frame = -2

Query: 506 GMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNSSNFIFERLDTQNAVSWNAMIAANAH 327
           G  +HA  +      D  + N+L+ MYAK G++  +   F+ ++ +N +SW ++I+  A 
Sbjct: 353 GTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAK 412

Query: 326 HGCGEDALKLFAKMH-RARLDFDQXXXXXXXXXXXXXXXXXXGQQLHNLIIKTGFDSDLH 150
           HG G  A+ L+ KM  +     D                    +  +N++ K        
Sbjct: 413 HGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAE 472

Query: 149 VTNAAMDMYGKCGEMEEVLQMLPSPSNRSRLS-WNILISGFSRHGY 15
             +  +D++ + G +EE   +L     +   S W  ++   S +GY
Sbjct: 473 HYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGY 518


>emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  260 bits (665), Expect = 1e-67
 Identities = 123/193 (63%), Positives = 150/193 (77%)
 Frame = -2

Query: 581  GISANYITIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNS 402
            GI ANYIT+V+VLG+ SA +DLL +GM +HAH V+TGFE D YV+NSL+TMYAKCGDLNS
Sbjct: 595  GIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNS 654

Query: 401  SNFIFERLDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQXXXXXXXXXXXX 222
            SN+IF+ L  ++ ++WNAM+AANAHHGCGE+ALK+F +M    ++ DQ            
Sbjct: 655  SNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATAN 714

Query: 221  XXXXXXGQQLHNLIIKTGFDSDLHVTNAAMDMYGKCGEMEEVLQMLPSPSNRSRLSWNIL 42
                  GQQLH L+IK GF+SDLHVTNAAMDMYGKCGEM +VL+MLP P NRSRLSWNIL
Sbjct: 715  LAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNIL 774

Query: 41   ISGFSRHGYFEKA 3
            IS F+RHG F+KA
Sbjct: 775  ISAFARHGCFQKA 787



 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 50/188 (26%), Positives = 92/188 (48%)
 Frame = -2

Query: 581 GISANYITIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNS 402
           G+S N  T   V  S    ED +  G  V  H +  GFE    V NSL++M++    +  
Sbjct: 292 GVSGNQNTFATVTSSCGLLEDQV-LGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEE 350

Query: 401 SNFIFERLDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQXXXXXXXXXXXX 222
           + ++F+ ++  + +SWNAMI+A AHHG   ++L+ F  M     + +             
Sbjct: 351 ACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSS 410

Query: 221 XXXXXXGQQLHNLIIKTGFDSDLHVTNAAMDMYGKCGEMEEVLQMLPSPSNRSRLSWNIL 42
                 G+ +H L++K G DS++ + N  + +Y + G  E+   +  + + R  +SWN +
Sbjct: 411 VDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSM 470

Query: 41  ISGFSRHG 18
           ++ + + G
Sbjct: 471 MACYVQDG 478



 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 3/183 (1%)
 Frame = -2

Query: 560 TIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNSSNFIFER 381
           T ++ L S  +S D L +G  +H   V  G + +  + N+LLT+Y++ G    +  +F+ 
Sbjct: 399 TTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQA 458

Query: 380 LDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQXXXXXXXXXXXXXXXXXXG 201
           +  ++ +SWN+M+A     G   D LK+ A++ +     +                    
Sbjct: 459 MTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIES 518

Query: 200 QQLHNLIIKTGFDSDLHVTNAAMDMYGKCG---EMEEVLQMLPSPSNRSRLSWNILISGF 30
           + +H LII  GF   L V NA + MYGK G   E ++VLQ +P P    R++WN LI G 
Sbjct: 519 KIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQP---DRVTWNALIGGH 575

Query: 29  SRH 21
           + +
Sbjct: 576 AEN 578



 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 50/190 (26%), Positives = 93/190 (48%), Gaps = 1/190 (0%)
 Frame = -2

Query: 569  NYITIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNSSNFI 390
            N++T  + L + S  E L+   + VHA  ++ GF     V N+L+TMY K G +  +  +
Sbjct: 498  NHVTFASALAACSNPECLIESKI-VHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKV 556

Query: 389  FERLDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQ-XXXXXXXXXXXXXXX 213
             + +   + V+WNA+I  +A +    +A+K +  +    +  +                 
Sbjct: 557  LQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDL 616

Query: 212  XXXGQQLHNLIIKTGFDSDLHVTNAAMDMYGKCGEMEEVLQMLPSPSNRSRLSWNILISG 33
               G  +H  I+ TGF+SD +V N+ + MY KCG++     +     N+S ++WN +++ 
Sbjct: 617  LKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAA 676

Query: 32   FSRHGYFEKA 3
             + HG  E+A
Sbjct: 677  NAHHGCGEEA 686



 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 44/188 (23%), Positives = 84/188 (44%)
 Frame = -2

Query: 581 GISANYITIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNS 402
           G+  N   + +++ + S S  + + G  VH   V TG   D YV  +L+  Y   G + +
Sbjct: 190 GVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYN 249

Query: 401 SNFIFERLDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQXXXXXXXXXXXX 222
           +  +FE +   N VSW +++   +  G   + L ++ +M +  +  +Q            
Sbjct: 250 AQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGL 309

Query: 221 XXXXXXGQQLHNLIIKTGFDSDLHVTNAAMDMYGKCGEMEEVLQMLPSPSNRSRLSWNIL 42
                 G Q+   II+ GF+  + V N+ + M+     +EE   +    +    +SWN +
Sbjct: 310 LEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAM 369

Query: 41  ISGFSRHG 18
           IS ++ HG
Sbjct: 370 ISAYAHHG 377



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 6/186 (3%)
 Frame = -2

Query: 542  GSFSASEDL--LNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNSSNFIFERLDTQ 369
            G  +A+ +L  L  G  +H   +  GFE D +V N+ + MY KCG+++    +  +   +
Sbjct: 707  GGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINR 766

Query: 368  NAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQXXXXXXXXXXXXXXXXXXGQQLH 189
            + +SWN +I+A A HGC + A + F +M +     D                   G   +
Sbjct: 767  SRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYY 826

Query: 188  NLIIKT-GFDSDLHVTNAAMDMYGKCGEM---EEVLQMLPSPSNRSRLSWNILISGFSRH 21
            + + +  G    +      +D+ G+ G +   E  ++ +P P N   L+W  L++    H
Sbjct: 827  DSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPN--DLAWRSLLAACRIH 884

Query: 20   GYFEKA 3
            G  E A
Sbjct: 885  GNLELA 890


>ref|XP_002310674.1| predicted protein [Populus trichocarpa] gi|222853577|gb|EEE91124.1|
            predicted protein [Populus trichocarpa]
          Length = 908

 Score =  224 bits (572), Expect = 6e-57
 Identities = 110/193 (56%), Positives = 139/193 (72%)
 Frame = -2

Query: 581  GISANYITIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNS 402
            G+  NYITI NVLG+  A  DLL +GM +HA  ++TGF+ D YV+NSL+TMYAKCGDLNS
Sbjct: 429  GVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNS 488

Query: 401  SNFIFERLDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQXXXXXXXXXXXX 222
            SN IF+RL ++NA +WNAM+AANAHHG  E+ALK   +M RA ++ D+            
Sbjct: 489  SNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAK 548

Query: 221  XXXXXXGQQLHNLIIKTGFDSDLHVTNAAMDMYGKCGEMEEVLQMLPSPSNRSRLSWNIL 42
                  GQQLH L +K G DS+  V +A MDMYGKCGE+++VL+++P P NRSRLSWNIL
Sbjct: 549  LAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNIL 608

Query: 41   ISGFSRHGYFEKA 3
             S FSRHG+FEKA
Sbjct: 609  TSSFSRHGFFEKA 621



 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 53/191 (27%), Positives = 95/191 (49%), Gaps = 1/191 (0%)
 Frame = -2

Query: 572 ANYITIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNSSNF 393
           ANY+T  + L + S  E     G  +HA  +  G  ++  V N+L+T+YAK G +  +  
Sbjct: 331 ANYVTFTSALAACSDPE-FATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKK 389

Query: 392 IFERLDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQ-XXXXXXXXXXXXXX 216
           +F+ +  ++ V+WNA+I  +A     ++ALK F  M    +  +                
Sbjct: 390 VFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPND 449

Query: 215 XXXXGQQLHNLIIKTGFDSDLHVTNAAMDMYGKCGEMEEVLQMLPSPSNRSRLSWNILIS 36
               G  +H  II TGF SD +V N+ + MY KCG++     +    ++++  +WN +++
Sbjct: 450 LLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMA 509

Query: 35  GFSRHGYFEKA 3
             + HG+ E+A
Sbjct: 510 ANAHHGHMEEA 520



 Score = 85.5 bits (210), Expect = 6e-15
 Identities = 47/188 (25%), Positives = 96/188 (51%)
 Frame = -2

Query: 581 GISANYITIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNS 402
           G+S N  T+ +V+ +  + E+ L  G  V  H +  G E +  V NSL++M+   G +  
Sbjct: 126 GMSCNDNTMSSVISTCVSLENEL-LGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEE 184

Query: 401 SNFIFERLDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQXXXXXXXXXXXX 222
           + ++F  +D  + +SWN+MIAA   +G  +++L+ F+ M R   + +             
Sbjct: 185 ACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGS 244

Query: 221 XXXXXXGQQLHNLIIKTGFDSDLHVTNAAMDMYGKCGEMEEVLQMLPSPSNRSRLSWNIL 42
                 G+ +H+L++K G++S++  +N  + MY   G  E+   +      +  +SWN +
Sbjct: 245 VDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSM 304

Query: 41  ISGFSRHG 18
           ++ +++ G
Sbjct: 305 MACYAQDG 312



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 49/176 (27%), Positives = 83/176 (47%)
 Frame = -2

Query: 560 TIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNSSNFIFER 381
           T ++ + +   S D L +G  +H+  +  G+  +    N+L+TMY+  G    +  +F+ 
Sbjct: 233 TTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQG 292

Query: 380 LDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQXXXXXXXXXXXXXXXXXXG 201
           +  ++ +SWN+M+A  A  G   DALKL A M   R   +                   G
Sbjct: 293 MVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEG 352

Query: 200 QQLHNLIIKTGFDSDLHVTNAAMDMYGKCGEMEEVLQMLPSPSNRSRLSWNILISG 33
           + LH L+I  G   ++ V NA + +Y K G M E  ++  +   R  ++WN LI G
Sbjct: 353 KILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGG 408


>ref|XP_002513375.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223547283|gb|EEF48778.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 922

 Score =  219 bits (557), Expect = 3e-55
 Identities = 109/192 (56%), Positives = 136/192 (70%)
 Frame = -2

Query: 578  ISANYITIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNSS 399
            I A+YITI NVLG+  A  DLL +GM +HA+TV+ G E D YV+NSL+TMYAKCGDLNSS
Sbjct: 714  IPASYITIANVLGALLAPTDLLKHGMPIHAYTVMIGLESDQYVQNSLITMYAKCGDLNSS 773

Query: 398  NFIFERLDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQXXXXXXXXXXXXX 219
            N IF+ L  +NAV+WN ++AANA+HG  E++LKL  KM  A +D DQ             
Sbjct: 774  NCIFDGLINKNAVAWNTVMAANAYHGQMEESLKLLVKMRHAGVDLDQFSFSGCLSATATL 833

Query: 218  XXXXXGQQLHNLIIKTGFDSDLHVTNAAMDMYGKCGEMEEVLQMLPSPSNRSRLSWNILI 39
                 GQQL +L +K GFDSD  VTNA MDMY KCGE+++VL+++P P  RSRLSWN LI
Sbjct: 834  AMLEEGQQLQSLAVKLGFDSDPFVTNALMDMYAKCGELDDVLRIIPQPLERSRLSWNTLI 893

Query: 38   SGFSRHGYFEKA 3
            S F+RHG FE+A
Sbjct: 894  SSFARHGNFERA 905



 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 50/186 (26%), Positives = 91/186 (48%)
 Frame = -2

Query: 560  TIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNSSNFIFER 381
            T ++ L S   S D L +G  +H+  +  G + +  + N+L+ MY+  G    ++ +F++
Sbjct: 518  TTLSTLLSECGSVDNLKWGRGIHSLVIKFGMDSNICICNTLIAMYSGAGKSEHADLVFQK 577

Query: 380  LDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQXXXXXXXXXXXXXXXXXXG 201
            +  ++ +SWN+M+A  A  G   DALK+F ++   +   +                   G
Sbjct: 578  MAERDLISWNSMLACYAQDGKSLDALKIFTRIFHMKKGANFVTFTSALAACSDPDFIAEG 637

Query: 200  QQLHNLIIKTGFDSDLHVTNAAMDMYGKCGEMEEVLQMLPSPSNRSRLSWNILISGFSRH 21
            + LH L+I TG    L V+NA + +Y K G   E  ++    S R  ++WN LI G + +
Sbjct: 638  RILHALVILTGLHESLIVSNALVTLYAKSGTTIEAKKVFQMMSRRDEVTWNALIGGHANN 697

Query: 20   GYFEKA 3
               ++A
Sbjct: 698  RESDEA 703



 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 48/190 (25%), Positives = 93/190 (48%)
 Frame = -2

Query: 572  ANYITIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNSSNF 393
            AN++T  + L + S   D +  G  +HA  ++TG  +   V N+L+T+YAK G    +  
Sbjct: 616  ANFVTFTSALAACS-DPDFIAEGRILHALVILTGLHESLIVSNALVTLYAKSGTTIEAKK 674

Query: 392  IFERLDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQXXXXXXXXXXXXXXX 213
            +F+ +  ++ V+WNA+I  +A++   ++A+K F  M                        
Sbjct: 675  VFQMMSRRDEVTWNALIGGHANNRESDEAVKAFKLMREDIPASYITIANVLGALLAPTDL 734

Query: 212  XXXGQQLHNLIIKTGFDSDLHVTNAAMDMYGKCGEMEEVLQMLPSPSNRSRLSWNILISG 33
               G  +H   +  G +SD +V N+ + MY KCG++     +     N++ ++WN +++ 
Sbjct: 735  LKHGMPIHAYTVMIGLESDQYVQNSLITMYAKCGDLNSSNCIFDGLINKNAVAWNTVMAA 794

Query: 32   FSRHGYFEKA 3
             + HG  E++
Sbjct: 795  NAYHGQMEES 804



 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 47/188 (25%), Positives = 90/188 (47%)
 Frame = -2

Query: 581 GISANYITIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNS 402
           G+S N  T+  V+ S ++ ED    G  +  H + +G   +  V NSL++M+   G    
Sbjct: 411 GLSGNANTLATVISSCASLEDEF-LGHQILGHVIKSGLGTNVSVENSLISMFGSFGRAQE 469

Query: 401 SNFIFERLDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQXXXXXXXXXXXX 222
           + +IF  ++  + +SWN+MI+    +G  E++L+ F  M       +             
Sbjct: 470 ACYIFGGMNEHDIISWNSMISVYVQNGLFEESLRCFYWMQHVHNHINSTTLSTLLSECGS 529

Query: 221 XXXXXXGQQLHNLIIKTGFDSDLHVTNAAMDMYGKCGEMEEVLQMLPSPSNRSRLSWNIL 42
                 G+ +H+L+IK G DS++ + N  + MY   G+ E    +    + R  +SWN +
Sbjct: 530 VDNLKWGRGIHSLVIKFGMDSNICICNTLIAMYSGAGKSEHADLVFQKMAERDLISWNSM 589

Query: 41  ISGFSRHG 18
           ++ +++ G
Sbjct: 590 LACYAQDG 597



 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 45/193 (23%), Positives = 86/193 (44%)
 Frame = -2

Query: 581 GISANYITIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNS 402
           GI        +++ +   S  +L+ G+ VH   V  G   D +V  SLL  Y   G   +
Sbjct: 309 GIKPTGFAFASLVTACDRSGCMLSEGIQVHDLIVKFGMLCDVFVGTSLLHFYGTYGLAFN 368

Query: 401 SNFIFERLDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQXXXXXXXXXXXX 222
           +  +F  +  +N VSW A++ A +  G   + + ++ +M    L  +             
Sbjct: 369 ARRVFNEMLDKNVVSWTALMVAYSDFGDPMEVMNIYCEMRCEGLSGNANTLATVISSCAS 428

Query: 221 XXXXXXGQQLHNLIIKTGFDSDLHVTNAAMDMYGKCGEMEEVLQMLPSPSNRSRLSWNIL 42
                 G Q+   +IK+G  +++ V N+ + M+G  G  +E   +    +    +SWN +
Sbjct: 429 LEDEFLGHQILGHVIKSGLGTNVSVENSLISMFGSFGRAQEACYIFGGMNEHDIISWNSM 488

Query: 41  ISGFSRHGYFEKA 3
           IS + ++G FE++
Sbjct: 489 ISVYVQNGLFEES 501



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/85 (35%), Positives = 50/85 (58%)
 Frame = -2

Query: 539  SFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNSSNFIFERLDTQNAV 360
            S +A+  +L  G  + +  V  GF+ D +V N+L+ MYAKCG+L+    I  +   ++ +
Sbjct: 828  SATATLAMLEEGQQLQSLAVKLGFDSDPFVTNALMDMYAKCGELDDVLRIIPQPLERSRL 887

Query: 359  SWNAMIAANAHHGCGEDALKLFAKM 285
            SWN +I++ A HG  E A + F +M
Sbjct: 888  SWNTLISSFARHGNFERAKETFHEM 912


>ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 934

 Score =  214 bits (546), Expect = 6e-54
 Identities = 100/193 (51%), Positives = 143/193 (74%)
 Frame = -2

Query: 581  GISANYITIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNS 402
            G+  NYITIVN+L +F + +DLL++GM +HAH V+ GFE +++V++SL+TMYA+CGDLN+
Sbjct: 455  GVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNT 514

Query: 401  SNFIFERLDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQXXXXXXXXXXXX 222
            SN+IF+ L  +N+ +WNA+++ANAH+G GE+ALKL  KM    +  DQ            
Sbjct: 515  SNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGN 574

Query: 221  XXXXXXGQQLHNLIIKTGFDSDLHVTNAAMDMYGKCGEMEEVLQMLPSPSNRSRLSWNIL 42
                  GQQLH+LIIK GF+S+ +V NA MDMYGKCGE+++V ++LP P +RS+ SWNIL
Sbjct: 575  LTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNIL 634

Query: 41   ISGFSRHGYFEKA 3
            IS  +RHG+F++A
Sbjct: 635  ISALARHGFFQQA 647



 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 42/165 (25%), Positives = 81/165 (49%)
 Frame = -2

Query: 497 VHAHTVITGFEQDSYVRNSLLTMYAKCGDLNSSNFIFERLDTQNAVSWNAMIAANAHHGC 318
           VHAH +  G   D +V  SLL  Y   G +   + +F+ ++  N VSW +++   A++GC
Sbjct: 81  VHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGC 140

Query: 317 GEDALKLFAKMHRARLDFDQXXXXXXXXXXXXXXXXXXGQQLHNLIIKTGFDSDLHVTNA 138
            ++ + ++ ++ R  +  ++                  G Q+   +IK+G D+ + V N+
Sbjct: 141 VKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANS 200

Query: 137 AMDMYGKCGEMEEVLQMLPSPSNRSRLSWNILISGFSRHGYFEKA 3
            + M+G C  +EE   +      R  +SWN +I+    +G+ EK+
Sbjct: 201 LISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKS 245



 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 45/193 (23%), Positives = 93/193 (48%)
 Frame = -2

Query: 581 GISANYITIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNS 402
           G+  N   +  V+ S     D +  G  V    + +G +    V NSL++M+  C  +  
Sbjct: 155 GVYCNENAMATVIRSCGVLVDKM-LGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEE 213

Query: 401 SNFIFERLDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQXXXXXXXXXXXX 222
           ++ +F+ +  ++ +SWN++I A+ H+G  E +L+ F++M       D             
Sbjct: 214 ASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGS 273

Query: 221 XXXXXXGQQLHNLIIKTGFDSDLHVTNAAMDMYGKCGEMEEVLQMLPSPSNRSRLSWNIL 42
                 G+ LH +++K+G +S++ V N+ + MY + G+ E+   +      R  +SWN +
Sbjct: 274 AQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSM 333

Query: 41  ISGFSRHGYFEKA 3
           ++    +G + +A
Sbjct: 334 MASHVDNGNYPRA 346



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 50/179 (27%), Positives = 89/179 (49%)
 Frame = -2

Query: 569 NYITIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNSSNFI 390
           +YITI  +L    ++++L  +G  +H   V +G E +  V NSLL+MY++ G    + F+
Sbjct: 260 DYITISALLPVCGSAQNL-RWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFV 318

Query: 389 FERLDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQXXXXXXXXXXXXXXXX 210
           F ++  ++ +SWN+M+A++  +G    AL+L  +M + R                     
Sbjct: 319 FHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTR---KATNYVTFTTALSACYNL 375

Query: 209 XXGQQLHNLIIKTGFDSDLHVTNAAMDMYGKCGEMEEVLQMLPSPSNRSRLSWNILISG 33
              + +H  +I  G   +L + NA + MYGK G M    ++     +R  ++WN LI G
Sbjct: 376 ETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGG 434



 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 42/192 (21%), Positives = 88/192 (45%), Gaps = 1/192 (0%)
 Frame = -2

Query: 575 SANYITIVNVLGSFSASEDLLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNSSN 396
           + NY+T    L +    E L      VHA  ++ G   +  + N+L+TMY K G + ++ 
Sbjct: 359 ATNYVTFTTALSACYNLETL----KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQ 414

Query: 395 FIFERLDTQNAVSWNAMIAANAHHGCGEDALKLFAKMHRARLDFDQ-XXXXXXXXXXXXX 219
            + + +  ++ V+WNA+I  +A +     A++ F  +    +  +               
Sbjct: 415 RVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPD 474

Query: 218 XXXXXGQQLHNLIIKTGFDSDLHVTNAAMDMYGKCGEMEEVLQMLPSPSNRSRLSWNILI 39
                G  +H  I+  GF+ +  V ++ + MY +CG++     +    +N++  +WN ++
Sbjct: 475 DLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAIL 534

Query: 38  SGFSRHGYFEKA 3
           S  + +G  E+A
Sbjct: 535 SANAHYGPGEEA 546



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 4/176 (2%)
 Frame = -2

Query: 518  LLNYGMSVHAHTVITGFEQDSYVRNSLLTMYAKCGDLNSSNFIFERLDTQNAVSWNAMIA 339
            LL+ G  +H+  +  GFE + YV N+ + MY KCG+++    I  +  +++  SWN +I+
Sbjct: 577  LLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILIS 636

Query: 338  ANAHHGCGEDALKLFAKMHRARLDFDQ-XXXXXXXXXXXXXXXXXXGQQLHNLIIKTGFD 162
            A A HG  + A + F +M    L  D                         ++  K G  
Sbjct: 637  ALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVP 696

Query: 161  SDLHVTNAAMDMYGKCG---EMEEVLQMLPSPSNRSRLSWNILISGFSRHGYFEKA 3
            + +      +D+ G+ G   E E  +  +P P   + L W  L++    HG  E A
Sbjct: 697  TGIEHCVCIIDLLGRAGKLTEAENFINKMPVPP--TDLVWRSLLAACKIHGNLELA 750