BLASTX nr result

ID: Coptis24_contig00025789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025789
         (915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525210.1| zinc finger protein, putative [Ricinus commu...   264   2e-68
ref|XP_004137953.1| PREDICTED: uncharacterized protein LOC101209...   250   3e-64
ref|XP_003537233.1| PREDICTED: uncharacterized protein LOC100810...   247   2e-63
ref|XP_003542484.1| PREDICTED: uncharacterized protein LOC100818...   246   4e-63
ref|XP_002308497.1| predicted protein [Populus trichocarpa] gi|2...   238   2e-60

>ref|XP_002525210.1| zinc finger protein, putative [Ricinus communis]
           gi|223535507|gb|EEF37176.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 275

 Score =  264 bits (674), Expect = 2e-68
 Identities = 136/273 (49%), Positives = 177/273 (64%), Gaps = 1/273 (0%)
 Frame = +2

Query: 26  EQIIIAALSTLTPNQFSDLTQSLSSDFRLQHHRHCSLLLSPTRFSHTLYFLNSLTLHQKA 205
           E +I+AALSTLTP Q S LT S+ S     HH   SLL SP+ FS TL+ L+SL+L  K 
Sbjct: 4   ETMIMAALSTLTPPQLSHLTHSILSQTLHHHHSLSSLLSSPSSFSLTLHHLHSLSLPHKT 63

Query: 206 SLIARYFLTTLKKLTFVWDCXXXXXXXXXXVHGPMRLRDFDAVLLLMLLCEVSQHNSDAL 385
            LIA++ L++L +LT  +                ++ RD DAVLLL+LLC+V QHN D L
Sbjct: 64  LLIAKHLLSSLHQLTRFFPSPSHPS-------ATIKHRDLDAVLLLLLLCDVHQHNPDLL 116

Query: 386 EISSTKWIDVLKHYTLNNMFTLWGIGASSATILSKYIDIATGCWRFLDATG-CGANMERE 562
                +W  +L     + + T  GIG     +L  Y+++ T CW+F+ A G CG    RE
Sbjct: 117 RTPRDEWRGILTKRCSDTILTHSGIGVHYGGVLLPYVEMITRCWKFVAAMGGCGEKEGRE 176

Query: 563 VSTSAAAVISLPSVEVCGGGMSTSECVICMEEMNQGRDVCQLPCQHTFHWLCVLPWLKKR 742
           V+ + +AV++LP+VEV G    T EC IC EEM +GRDVC+LPCQH FHW+C+LPWLKKR
Sbjct: 177 VAAAPSAVVALPTVEVTGD--VTGECAICREEMREGRDVCELPCQHLFHWMCILPWLKKR 234

Query: 743 NTCPCCRFQLPTDDVFGEIERLWGILAKKGRGN 841
           NTCPCCRFQLPT+DV GEI+RLW +L K G G+
Sbjct: 235 NTCPCCRFQLPTEDVLGEIKRLWSVLMKAGGGS 267


>ref|XP_004137953.1| PREDICTED: uncharacterized protein LOC101209757 [Cucumis sativus]
           gi|449529876|ref|XP_004171924.1| PREDICTED:
           uncharacterized protein LOC101225495 [Cucumis sativus]
          Length = 283

 Score =  250 bits (639), Expect = 3e-64
 Identities = 129/268 (48%), Positives = 167/268 (62%), Gaps = 1/268 (0%)
 Frame = +2

Query: 32  IIIAALSTLTPNQFSDLTQSLSSDFRLQHHRHCSLLLSPTRFSHTLYFLNSLTLHQKASL 211
           +I AAL+TL+P + +DL+ S+ S+      R   +L SPT FS TL  LNSL+L  K+ L
Sbjct: 9   VITAALATLSPPRLADLSHSIFSEIHQHRRRLTFILSSPTLFSLTLRHLNSLSLSHKSLL 68

Query: 212 IARYFLTTLKKLTFVWDCXXXXXXXXXXVHGPMRLRDFDAVLLLMLLCEVSQHNSDALEI 391
           +AR+ L+ L++L+  +                +  +D DA +LL+LLCEV QHN  AL  
Sbjct: 69  LARFLLSALRRLSRPFQSPSKLLPYHPST-AAISPQDLDAAVLLLLLCEVRQHNPAALRT 127

Query: 392 SSTKWIDVLKHYTLNNMFTLWGIGASSATILSKYIDIATGCWRFLDATG-CGANMEREVS 568
             TKW   L     +++ T+ G+       L  YID    CW+F+   G CG  + REV+
Sbjct: 128 PITKWRATLCKIYSDSLLTVSGLATGGGGALIPYIDTVVRCWKFVGFVGSCGGKVRREVA 187

Query: 569 TSAAAVISLPSVEVCGGGMSTSECVICMEEMNQGRDVCQLPCQHTFHWLCVLPWLKKRNT 748
            S  AV+ LPSV V GGG +  ECVIC EEM +GRD C+LPC H FHWLC+LPWL+KRNT
Sbjct: 188 ASPMAVVELPSVAVGGGGAAV-ECVICKEEMGEGRDACKLPCDHLFHWLCILPWLRKRNT 246

Query: 749 CPCCRFQLPTDDVFGEIERLWGILAKKG 832
           CPCCRFQLPTDDV GEI+RLW IL K G
Sbjct: 247 CPCCRFQLPTDDVLGEIQRLWEILFKVG 274


>ref|XP_003537233.1| PREDICTED: uncharacterized protein LOC100810879 [Glycine max]
          Length = 264

 Score =  247 bits (631), Expect = 2e-63
 Identities = 133/266 (50%), Positives = 170/266 (63%), Gaps = 1/266 (0%)
 Frame = +2

Query: 32  IIIAALSTLTPNQFSDLTQSLSSDFRLQHHRHCSLLLSPTRFSHTLYFLNSLTLHQKASL 211
           II++ALSTLTP+QFSDLT+S+ S     H R  SLL  PT FS TL+ L++L+L QK  L
Sbjct: 8   IIMSALSTLTPSQFSDLTRSILSATNHHHRRLSSLLSYPTLFSLTLHHLHTLSLPQKTLL 67

Query: 212 IARYFLTTLKKLTFVWDCXXXXXXXXXXVHGPMRLRDFDAVLLLMLLCEVSQHNSDALEI 391
           IAR+ L++L  LT                    R RD DA LLL+LLCE   HN  ALE 
Sbjct: 68  IARHLLSSLHLLTAT----------SPHFSTATRQRDLDAALLLLLLCETHNHNPHALEA 117

Query: 392 SSTKWIDVLKHYTLNNMFTLWGIGASSATILSKYIDIATGCWRFLDATGCGANMER-EVS 568
             ++W  +L     +++ T+    A   T++  +++  + CWR + A  CG   E  EV+
Sbjct: 118 PVSEWRKILSKLFSDSLLTV--SLAPLGTVMIPFVETVSRCWRLVGALDCGGGKEAAEVA 175

Query: 569 TSAAAVISLPSVEVCGGGMSTSECVICMEEMNQGRDVCQLPCQHTFHWLCVLPWLKKRNT 748
            SAA V++LPSVEV   G    ECVIC EEM  GRDVC+LPCQH FHW+C+LPWL KRNT
Sbjct: 176 ASAATVVALPSVEVRHDGR---ECVICKEEMGIGRDVCELPCQHLFHWMCILPWLGKRNT 232

Query: 749 CPCCRFQLPTDDVFGEIERLWGILAK 826
           CPCCRF+LP+DDVFGEI+RLW +L K
Sbjct: 233 CPCCRFRLPSDDVFGEIQRLWEVLLK 258


>ref|XP_003542484.1| PREDICTED: uncharacterized protein LOC100818800 [Glycine max]
          Length = 260

 Score =  246 bits (629), Expect = 4e-63
 Identities = 133/265 (50%), Positives = 169/265 (63%)
 Frame = +2

Query: 32  IIIAALSTLTPNQFSDLTQSLSSDFRLQHHRHCSLLLSPTRFSHTLYFLNSLTLHQKASL 211
           II+AALSTLTP+QFSDLT+S+ S     H R  SLL SPT FS TL+ L++LTL QK  L
Sbjct: 8   IIMAALSTLTPSQFSDLTRSIISATNHHHRRLSSLLSSPTLFSLTLHHLHTLTLPQKTLL 67

Query: 212 IARYFLTTLKKLTFVWDCXXXXXXXXXXVHGPMRLRDFDAVLLLMLLCEVSQHNSDALEI 391
           IAR+ L++L  LT               +    R RD DA LLL+LLCE   HN  ALE 
Sbjct: 68  IARHLLSSLHLLTAT----------SPPLSTTTRQRDLDAALLLLLLCETHNHNPHALEA 117

Query: 392 SSTKWIDVLKHYTLNNMFTLWGIGASSATILSKYIDIATGCWRFLDATGCGANMEREVST 571
             ++W   L     +++ T+    A   T++  +++  + CWR + A  CG   E   + 
Sbjct: 118 PFSEWRKNLSKVFSDSLLTV--SLAPLGTVMIPFVETVSRCWRLVGALNCGGGKE---AA 172

Query: 572 SAAAVISLPSVEVCGGGMSTSECVICMEEMNQGRDVCQLPCQHTFHWLCVLPWLKKRNTC 751
           SAA +++LPSVEV   G    ECVIC EEM  GRDVC+LPCQH FHW+C+LPWL KRNTC
Sbjct: 173 SAAIMVALPSVEVRHSGR---ECVICKEEMGIGRDVCELPCQHLFHWMCILPWLGKRNTC 229

Query: 752 PCCRFQLPTDDVFGEIERLWGILAK 826
           PCCRF+LP+DDVFGEI+RLW +L K
Sbjct: 230 PCCRFRLPSDDVFGEIQRLWEVLVK 254


>ref|XP_002308497.1| predicted protein [Populus trichocarpa] gi|222854473|gb|EEE92020.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score =  238 bits (606), Expect = 2e-60
 Identities = 128/274 (46%), Positives = 167/274 (60%), Gaps = 1/274 (0%)
 Frame = +2

Query: 26  EQIIIAALSTLTPNQFSDLTQSLSSDFRLQHHRHCSLLLSPTRFSHTLYFLNSLTLHQKA 205
           E II AALSTL   Q +DLT S+ S     H R  SLL SP+ FS  L+ L+SL+L  K 
Sbjct: 4   ETIITAALSTLASPQLTDLTSSILSLTLHHHSRLSSLLCSPSLFSLALHHLHSLSLAHKT 63

Query: 206 SLIARYFLTTLKKLTFVWDCXXXXXXXXXXVHGPMRLRDFDAVLLLMLLCEVSQHNSDAL 385
            LIA+Y L++L  LT  +                ++ RD DA LLL+ LC+V Q + + L
Sbjct: 64  LLIAKYLLSSLHHLTRHFHPPTLIPPHPTTT---IKHRDLDAALLLIFLCDVHQESPEIL 120

Query: 386 EISSTKWIDVLKHYTLNNMFTLWGIGASSATILSKYIDIATGCWRFLDA-TGCGANMERE 562
           +   T W + L+ +    +     +G     +L  Y+++   CWRF+    GC     RE
Sbjct: 121 KTPRTGWREGLRKHYSKTVLRRSSVGVHYGGVLLPYVEMVIRCWRFVGVMAGCAVKEGRE 180

Query: 563 VSTSAAAVISLPSVEVCGGGMSTSECVICMEEMNQGRDVCQLPCQHTFHWLCVLPWLKKR 742
           V+ + AAV++LP+VEV GGG    ECVIC E+M+ GRDVC+LPC+H FHW+C+LPWLKK 
Sbjct: 181 VAAAPAAVVALPAVEVRGGG---GECVICREKMSGGRDVCELPCEHLFHWMCILPWLKKT 237

Query: 743 NTCPCCRFQLPTDDVFGEIERLWGILAKKGRGNL 844
           NTCPCCRFQLPT+DVF EIERLW  L K G G L
Sbjct: 238 NTCPCCRFQLPTEDVFCEIERLWSALIKIGDGAL 271


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