BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025775
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279724.1| PREDICTED: importin subunit alpha-2 [Vitis v...    75   4e-12
ref|XP_002323457.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|NP_195927.2| importin alpha isoform 9 [Arabidopsis thaliana]...    71   8e-11
emb|CAB86074.1| importin alpha-like protein [Arabidopsis thaliana]     71   8e-11
ref|XP_002873075.1| binding protein [Arabidopsis lyrata subsp. l...    71   1e-10

>ref|XP_002279724.1| PREDICTED: importin subunit alpha-2 [Vitis vinifera]
           gi|297741569|emb|CBI32701.3| unnamed protein product
           [Vitis vinifera]
          Length = 517

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/58 (62%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
 Frame = -1

Query: 182 MADHKRDPVKSSVGNTAGNRRREIAVTVGKERREALVRAKRLCRDDVD-NKEMIIDDD 12
           +A H+RDP+KSSVGN A NRRR+ A+TVGKERREALVR KRLCR  +  + ++ +D D
Sbjct: 6   LASHRRDPIKSSVGNVAANRRRQQAITVGKERREALVRTKRLCRVGISGDSDVPVDGD 63


>ref|XP_002323457.1| predicted protein [Populus trichocarpa] gi|222868087|gb|EEF05218.1|
           predicted protein [Populus trichocarpa]
          Length = 522

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/62 (62%), Positives = 47/62 (75%), Gaps = 8/62 (12%)
 Frame = -1

Query: 173 HKRDPVKSSVGNTAGNRRREIAVTVGKERREALVRAKRLCR-----DDVD---NKEMIID 18
           H+RDP+KSSVGN A +RRR+ AV VGKERRE+LVRAKRLCR     DD D     +MIID
Sbjct: 9   HRRDPIKSSVGNVAAHRRRQNAVAVGKERRESLVRAKRLCRVGPSCDDSDISIENDMIID 68

Query: 17  DD 12
           ++
Sbjct: 69  EE 70


>ref|NP_195927.2| importin alpha isoform 9 [Arabidopsis thaliana]
           gi|332003170|gb|AED90553.1| importin alpha isoform 9
           [Arabidopsis thaliana]
          Length = 519

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 8/64 (12%)
 Frame = -1

Query: 179 ADHKRDPVKSSVGNTAGNRRREIAVTVGKERREALVRAKRLCR--------DDVDNKEMI 24
           A ++RDP+KSSVGN AG RRR+ AVTV KERRE LVRAKRLCR        D +   EM+
Sbjct: 7   ASNRRDPIKSSVGNVAGQRRRKQAVTVAKERRELLVRAKRLCRVGTNGDVEDALVENEMM 66

Query: 23  IDDD 12
           +D++
Sbjct: 67  VDEE 70


>emb|CAB86074.1| importin alpha-like protein [Arabidopsis thaliana]
          Length = 483

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 8/64 (12%)
 Frame = -1

Query: 179 ADHKRDPVKSSVGNTAGNRRREIAVTVGKERREALVRAKRLCR--------DDVDNKEMI 24
           A ++RDP+KSSVGN AG RRR+ AVTV KERRE LVRAKRLCR        D +   EM+
Sbjct: 7   ASNRRDPIKSSVGNVAGQRRRKQAVTVAKERRELLVRAKRLCRVGTNGDVEDALVENEMM 66

Query: 23  IDDD 12
           +D++
Sbjct: 67  VDEE 70


>ref|XP_002873075.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318912|gb|EFH49334.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 519

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 8/64 (12%)
 Frame = -1

Query: 179 ADHKRDPVKSSVGNTAGNRRREIAVTVGKERREALVRAKRLCR--------DDVDNKEMI 24
           A ++RDP+KSSVG+ AG RRR+ AVTV KERRE LVRAKRLCR        D +   EM+
Sbjct: 7   ASNRRDPIKSSVGHVAGQRRRQQAVTVAKERRELLVRAKRLCRVGTNGDVEDSLVENEMM 66

Query: 23  IDDD 12
           ID++
Sbjct: 67  IDEE 70