BLASTX nr result

ID: Coptis24_contig00025764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025764
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA57810.1| TPA: hypothetical protein ZEAMMB73_345927 [Zea m...    71   2e-12
tpg|DAA57809.1| TPA: hypothetical protein ZEAMMB73_345927 [Zea m...    71   2e-12
ref|XP_004158295.1| PREDICTED: pleiotropic drug resistance prote...    73   2e-12
ref|XP_004144266.1| PREDICTED: pleiotropic drug resistance prote...    73   2e-12
ref|NP_566543.1| ABC transporter G family member 29 [Arabidopsis...    70   4e-12

>tpg|DAA57810.1| TPA: hypothetical protein ZEAMMB73_345927 [Zea mays]
          Length = 1538

 Score = 70.9 bits (172), Expect(2) = 2e-12
 Identities = 31/59 (52%), Positives = 44/59 (74%)
 Frame = +2

Query: 86   VARTIYCLIISQYGDMEDMVKVSRAGEQRIKDFVTDHYGYNTNFMGPAAGVLVGFTMFF 262
            VA T+Y LI+SQYGD+ED++KV    +Q++K F+ D++GY+ +FMG  A VL GFT  F
Sbjct: 1464 VAWTVYGLIVSQYGDVEDLIKVPGKPDQQVKAFIKDYFGYDPDFMGVVAAVLAGFTALF 1522



 Score = 26.2 bits (56), Expect(2) = 2e-12
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +3

Query: 267  FLFVFAINRFNFQKR 311
            F++V+ I RFNFQ+R
Sbjct: 1524 FIYVYCIKRFNFQQR 1538


>tpg|DAA57809.1| TPA: hypothetical protein ZEAMMB73_345927 [Zea mays]
          Length = 1478

 Score = 70.9 bits (172), Expect(2) = 2e-12
 Identities = 31/59 (52%), Positives = 44/59 (74%)
 Frame = +2

Query: 86   VARTIYCLIISQYGDMEDMVKVSRAGEQRIKDFVTDHYGYNTNFMGPAAGVLVGFTMFF 262
            VA T+Y LI+SQYGD+ED++KV    +Q++K F+ D++GY+ +FMG  A VL GFT  F
Sbjct: 1404 VAWTVYGLIVSQYGDVEDLIKVPGKPDQQVKAFIKDYFGYDPDFMGVVAAVLAGFTALF 1462



 Score = 26.2 bits (56), Expect(2) = 2e-12
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +3

Query: 267  FLFVFAINRFNFQKR 311
            F++V+ I RFNFQ+R
Sbjct: 1464 FIYVYCIKRFNFQQR 1478


>ref|XP_004158295.1| PREDICTED: pleiotropic drug resistance protein 12-like [Cucumis
            sativus]
          Length = 1484

 Score = 72.8 bits (177), Expect(2) = 2e-12
 Identities = 32/61 (52%), Positives = 44/61 (72%)
 Frame = +2

Query: 86   VARTIYCLIISQYGDMEDMVKVSRAGEQRIKDFVTDHYGYNTNFMGPAAGVLVGFTMFFE 265
            VA T+Y LI+SQY D+E ++KV  A +  +K ++  HYGY  +FMGP A VLVGFT+FF 
Sbjct: 1410 VAWTVYGLIVSQYRDIETLIKVPGAEDTTVKSYIEHHYGYRPDFMGPVAAVLVGFTVFFA 1469

Query: 266  I 268
            +
Sbjct: 1470 L 1470



 Score = 23.9 bits (50), Expect(2) = 2e-12
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 60   LPMQKIPKWW 89
            +P  KIPKWW
Sbjct: 1392 IPKPKIPKWW 1401


>ref|XP_004144266.1| PREDICTED: pleiotropic drug resistance protein 12-like [Cucumis
            sativus]
          Length = 1452

 Score = 72.8 bits (177), Expect(2) = 2e-12
 Identities = 32/61 (52%), Positives = 44/61 (72%)
 Frame = +2

Query: 86   VARTIYCLIISQYGDMEDMVKVSRAGEQRIKDFVTDHYGYNTNFMGPAAGVLVGFTMFFE 265
            VA T+Y LI+SQY D+E ++KV  A +  +K ++  HYGY  +FMGP A VLVGFT+FF 
Sbjct: 1378 VAWTVYGLIVSQYRDIETLIKVPGAEDTTVKSYIEHHYGYRPDFMGPVAAVLVGFTVFFA 1437

Query: 266  I 268
            +
Sbjct: 1438 L 1438



 Score = 23.9 bits (50), Expect(2) = 2e-12
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 60   LPMQKIPKWW 89
            +P  KIPKWW
Sbjct: 1360 IPKPKIPKWW 1369


>ref|NP_566543.1| ABC transporter G family member 29 [Arabidopsis thaliana]
            gi|97180273|sp|Q94A18.2|AB29G_ARATH RecName: Full=ABC
            transporter G family member 29; Short=ABC transporter
            ABCG.29; Short=AtABCG29; AltName: Full=Pleiotropic drug
            resistance protein 1 gi|2062169|gb|AAB63643.1| ABC
            transporter (PDR5-like) isolog [Arabidopsis thaliana]
            gi|9279716|dbj|BAB01273.1| ABC transporter [Arabidopsis
            thaliana] gi|28144351|tpg|DAA00870.1| TPA_exp: PDR1 ABC
            transporter [Arabidopsis thaliana]
            gi|332642278|gb|AEE75799.1| ABC transporter G family
            member 29 [Arabidopsis thaliana]
          Length = 1416

 Score = 69.7 bits (169), Expect(3) = 4e-12
 Identities = 34/60 (56%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
 Frame = +2

Query: 86   VARTIYCLIISQYGDMEDMVKV-SRAGEQRIKDFVTDHYGYNTNFMGPAAGVLVGFTMFF 262
            VA T+Y LI+SQYGD+ED +KV   A +  IK ++ +HYGY+ +FM P A VLVGFT+FF
Sbjct: 1341 VAWTVYGLIVSQYGDVEDTIKVPGMANDPTIKWYIENHYGYDADFMIPIATVLVGFTLFF 1400



 Score = 23.1 bits (48), Expect(3) = 4e-12
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 57   LLPMQKIPKWW 89
            ++P  +IPKWW
Sbjct: 1322 VIPRPRIPKWW 1332



 Score = 22.3 bits (46), Expect(3) = 4e-12
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 267  FLFVFAINRFNFQKR 311
            F+F F I   NFQ+R
Sbjct: 1402 FMFAFGIRTLNFQQR 1416


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