BLASTX nr result

ID: Coptis24_contig00025763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025763
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274551.1| PREDICTED: uncharacterized protein LOC100267...   138   5e-31
ref|XP_002528390.1| conserved hypothetical protein [Ricinus comm...   118   5e-25
ref|XP_004146667.1| PREDICTED: uncharacterized protein LOC101206...   109   2e-22
ref|XP_002336580.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|NP_001078473.1| uncharacterized protein [Arabidopsis thalian...   107   2e-21

>ref|XP_002274551.1| PREDICTED: uncharacterized protein LOC100267275 [Vitis vinifera]
           gi|297743698|emb|CBI36581.3| unnamed protein product
           [Vitis vinifera]
          Length = 117

 Score =  138 bits (348), Expect = 5e-31
 Identities = 70/116 (60%), Positives = 88/116 (75%)
 Frame = -3

Query: 447 MVITQNSFLFSTPSTSLVTWRNSRKLKHTLAKKQDSTDNFKSQQQQPFLTLRVPNVFIAR 268
           M++TQ++F+F+T    L   +N  K + TLA+K+D++ N  +QQQQ  L LRV N  +AR
Sbjct: 1   MLVTQDTFIFNTLPPYLFHIKNGTKFRPTLAQKRDASKNSSTQQQQSILPLRVSNTILAR 60

Query: 267 SVIAVLGLGFIDAGYSGDWSRIGAISKEFEESLRLAAYLVTPLCLFLIFSFTKEQE 100
           S IAVLGLGFIDAGYSGDWSRIG ISKE E+ L+L+A LV PLCLFLIFS +KE E
Sbjct: 61  SAIAVLGLGFIDAGYSGDWSRIGVISKETEDFLKLSALLVVPLCLFLIFSISKEPE 116


>ref|XP_002528390.1| conserved hypothetical protein [Ricinus communis]
           gi|223532178|gb|EEF33983.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 127

 Score =  118 bits (296), Expect = 5e-25
 Identities = 63/123 (51%), Positives = 87/123 (70%), Gaps = 5/123 (4%)
 Frame = -3

Query: 453 MKMVITQNSFLFSTPSTSLVTWRNSRK-----LKHTLAKKQDSTDNFKSQQQQPFLTLRV 289
           MK  +  N+ L S+ S+S + +  ++K     +  T+AKK+DS +N ++QQQ   L L++
Sbjct: 4   MKTTLFFNNSLSSSSSSSSLPYHPTKKNGQKYIIITVAKKKDSPENSRTQQQNSILPLKI 63

Query: 288 PNVFIARSVIAVLGLGFIDAGYSGDWSRIGAISKEFEESLRLAAYLVTPLCLFLIFSFTK 109
               +A+S IAV GLGFIDAGYSGDWSRIG ISKE E+ L+LAA+ V PLC+FLIFS ++
Sbjct: 64  SYRALAKSAIAVFGLGFIDAGYSGDWSRIGVISKESEDLLKLAAFAVIPLCIFLIFSISR 123

Query: 108 EQE 100
           EQE
Sbjct: 124 EQE 126


>ref|XP_004146667.1| PREDICTED: uncharacterized protein LOC101206545 [Cucumis sativus]
           gi|449503149|ref|XP_004161858.1| PREDICTED:
           uncharacterized LOC101206545 [Cucumis sativus]
          Length = 126

 Score =  109 bits (273), Expect = 2e-22
 Identities = 59/120 (49%), Positives = 79/120 (65%), Gaps = 7/120 (5%)
 Frame = -3

Query: 447 MVITQNSFLF---STPSTSLVTWRNSRKLKHTLAKKQDSTDNFKSQQQQP----FLTLRV 289
           M +  +SF+F   S     L+   N RK   T AK+   +D+  +   QP    F +LRV
Sbjct: 1   MAMVDSSFIFIGFSPVPHPLLNNNNGRKFGITSAKRTQDSDSDSASSTQPNQFKFPSLRV 60

Query: 288 PNVFIARSVIAVLGLGFIDAGYSGDWSRIGAISKEFEESLRLAAYLVTPLCLFLIFSFTK 109
            N  +ARSV++VLGLGF+DAGYSGDWSRIGAI+KE E+ L++ A LV P C+FL+FSF+K
Sbjct: 61  SNPLLARSVVSVLGLGFVDAGYSGDWSRIGAITKETEDLLKIGALLVVPFCVFLVFSFSK 120


>ref|XP_002336580.1| predicted protein [Populus trichocarpa] gi|222836235|gb|EEE74656.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score =  107 bits (267), Expect = 1e-21
 Identities = 55/96 (57%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
 Frame = -3

Query: 387 RNSRKLKHT-LAKKQDSTDNFKSQQQQPFLTLRVPNVFIARSVIAVLGLGFIDAGYSGDW 211
           +N RK   T LAK+++ ++N +SQ+Q P   LRVP   +++S  AV GLGFIDAGYSGDW
Sbjct: 72  KNGRKCFATALAKRKEPSENSRSQEQ-PVFPLRVPKNILSQSAAAVFGLGFIDAGYSGDW 130

Query: 210 SRIGAISKEFEESLRLAAYLVTPLCLFLIFSFTKEQ 103
           SRIG ISKE E+ L++AA++V PLC+FLIFS +KE+
Sbjct: 131 SRIGVISKESEDLLKVAAFVVIPLCVFLIFSVSKEE 166


>ref|NP_001078473.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332660418|gb|AEE85818.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 114

 Score =  107 bits (266), Expect = 2e-21
 Identities = 50/85 (58%), Positives = 68/85 (80%)
 Frame = -3

Query: 360 LAKKQDSTDNFKSQQQQPFLTLRVPNVFIARSVIAVLGLGFIDAGYSGDWSRIGAISKEF 181
           ++K++D ++  KS +++P L ++VPN  +ARS IAVL LGFIDAGYSGDWSRIG ISKE 
Sbjct: 29  MSKRRDFSE--KSNEERPILRIKVPNTIVARSAIAVLSLGFIDAGYSGDWSRIGVISKET 86

Query: 180 EESLRLAAYLVTPLCLFLIFSFTKE 106
           EE L++AA+LV PLC+FL  SF+ +
Sbjct: 87  EELLKIAAFLVVPLCIFLALSFSND 111


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