BLASTX nr result

ID: Coptis24_contig00025755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025755
         (951 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272192.1| PREDICTED: uncharacterized protein LOC100259...    72   3e-10
ref|XP_002530079.1| conserved hypothetical protein [Ricinus comm...    58   3e-06
emb|CBI37626.3| unnamed protein product [Vitis vinifera]               58   4e-06

>ref|XP_002272192.1| PREDICTED: uncharacterized protein LOC100259153 [Vitis vinifera]
          Length = 990

 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 17/230 (7%)
 Frame = -2

Query: 950  LDYQKLGYPKLSGLLETIPGIAVEFNFVLSSEKSSKAVIPKSVWENDGXXXXXXXXXXXX 771
            LD QKLGY +L+ LL+ +PG+ +E  +++ S  +SK  + +S   N              
Sbjct: 747  LDVQKLGYQRLASLLQIMPGVKIESTYIVPSWTASKGSLLESSDTNGQEDNVSGKVGNSD 806

Query: 770  XXDNDP-------DSAWKELGPI---SKPKNCMRSENNAETKE---GKENLDFDDNSYLS 630
               +D        DS W+ELGP+   +  +N M SE   + KE    + +LD++  S   
Sbjct: 807  SELSDASRKEDDLDSPWEELGPVADTNSNRNEMESELRRKKKEETVRQVHLDYEP-SPSD 865

Query: 629  DEFSDSDGESPVRDGLDGKRVTRKXXXXXXXXXXXXSWH--KDDNGKKSRXXXXXXXXXS 456
            D+FSDS+GE+ +  G D +   +             SW+  K+DN ++            
Sbjct: 866  DDFSDSEGETSLSTGTDRQERPKISKEDSSLLRILDSWYSSKEDNKRRDGVENADGMIDC 925

Query: 455  CRNESKL--SSEVWVDKTREILIGGRRKKPSKTFSFIPDEVGPVVDDKGK 312
             RN+ K   SS  + +     +   ++++P +++SF+ D      DDK K
Sbjct: 926  SRNDLKSSGSSGFFSEDDTSPINCRKKQRPVRSYSFVSDH----GDDKDK 971


>ref|XP_002530079.1| conserved hypothetical protein [Ricinus communis]
            gi|223530432|gb|EEF32319.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 952

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 52/218 (23%), Positives = 82/218 (37%), Gaps = 6/218 (2%)
 Frame = -2

Query: 950  LDYQKLGYPKLSGLLETIPGIAVEFNFVLSSEKSSKAVIPKSVWENDGXXXXXXXXXXXX 771
            L  QK GY KL+ LL+ +PG+ +E  +++ + K++K  I  S   N              
Sbjct: 698  LHVQKFGYQKLTSLLQIMPGVKIESTYIIPANKATKCSIQDSDVPNIQESNVSDTSKALG 757

Query: 770  XXDND-PDSAWKELGPISKPKNCMRSENNAETKEGKENLDFDDNSYLSDEFSDSDGESPV 594
               +D  DS W +LGP+        S    E +E        + S   D+FSD +GES  
Sbjct: 758  GELSDESDSGWDKLGPVDN-----SSSRRKEQEEQCLGSPHYEPSLSEDDFSDPEGESWT 812

Query: 593  RDGLDGKRVTRKXXXXXXXXXXXXSWHKDDNG-----KKSRXXXXXXXXXSCRNESKLSS 429
                +G+   R              W+   +G     K               + S L +
Sbjct: 813  ATQQEGQAKYRVNTEDSSLLQILDLWYSSSDGVNEKDKSENVQDMVNCDLQLSDLSGLDT 872

Query: 428  EVWVDKTREILIGGRRKKPSKTFSFIPDEVGPVVDDKG 315
            E+           G +++P K +SF+     P  DD G
Sbjct: 873  EIGTSLGN----SGSKQRPQKCYSFV---AAPDGDDHG 903


>emb|CBI37626.3| unnamed protein product [Vitis vinifera]
          Length = 871

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 36/126 (28%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
 Frame = -2

Query: 950  LDYQKLGYPKLSGLLETIPGIAVEFNFVLSSEKSSKAVIPKSVWENDGXXXXXXXXXXXX 771
            LD QKLGY +L+ LL+ +PG+ +E  +++ S  +SK  + +S   N              
Sbjct: 687  LDVQKLGYQRLASLLQIMPGVKIESTYIVPSWTASKGSLLESSDTN-----------GQE 735

Query: 770  XXDNDPDSAWKELGPISKPKNCMRSENNAETKEGKENLDFDDNSYLS--DEFSDSDGESP 597
              ++D DS W+ELGP++   +   + N  E+++ +  +  +D+S L   D +  S  ++ 
Sbjct: 736  DNEDDLDSPWEELGPVADTNS---NRNEMESEQERPKISKEDSSLLRILDSWYSSKEDNK 792

Query: 596  VRDGLD 579
             RDG++
Sbjct: 793  RRDGVE 798


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