BLASTX nr result

ID: Coptis24_contig00025750 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025750
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301496.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_002320986.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002515318.1| hypothetical protein RCOM_1348010 [Ricinus c...    69   3e-10
ref|XP_002314923.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|XP_004171266.1| PREDICTED: zinc finger protein 6-like [Cucum...    66   3e-09

>ref|XP_002301496.1| predicted protein [Populus trichocarpa] gi|222843222|gb|EEE80769.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/58 (65%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
 Frame = -2

Query: 168 SDQKATSTLRLFGFSVTQQHDTATS--DQTSEVKKFECQFCHREFANSQALGGHQNAH 1
           SDQK TS L+LFGF +T+Q D   S  + + E +KFEC FCHR FANSQALGGHQNAH
Sbjct: 11  SDQKTTSKLKLFGFPLTEQDDEILSKTENSLENRKFECHFCHRAFANSQALGGHQNAH 68


>ref|XP_002320986.1| predicted protein [Populus trichocarpa] gi|222861759|gb|EEE99301.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 36/57 (63%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
 Frame = -2

Query: 168 SDQKATSTLRLFGFSVTQQHDTAT-SDQTSEVKKFECQFCHREFANSQALGGHQNAH 1
           SD KATS L+LFGF +T+Q +  + ++ T   +KFEC FCHR FANSQALGGHQNAH
Sbjct: 11  SDHKATSKLKLFGFPLTEQDEILSKTENTLGNRKFECHFCHRAFANSQALGGHQNAH 67


>ref|XP_002515318.1| hypothetical protein RCOM_1348010 [Ricinus communis]
           gi|223545798|gb|EEF47302.1| hypothetical protein
           RCOM_1348010 [Ricinus communis]
          Length = 196

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/72 (52%), Positives = 48/72 (66%), Gaps = 11/72 (15%)
 Frame = -2

Query: 183 SSRKPSDQ---KATSTLRLFGFSVTQ-QHDTATSDQTS-------EVKKFECQFCHREFA 37
           SS  PS Q   K +S L+LFGF++ + + D A S +T+       E++KFEC FC R FA
Sbjct: 4   SSSTPSQQSHHKPSSALKLFGFTLIEHEQDVAKSGETTSSNCSSVEIRKFECHFCGRAFA 63

Query: 36  NSQALGGHQNAH 1
           NSQALGGHQNAH
Sbjct: 64  NSQALGGHQNAH 75


>ref|XP_002314923.1| predicted protein [Populus trichocarpa] gi|222863963|gb|EEF01094.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
 Frame = -2

Query: 171 PSDQKATSTLRLFGFSVTQQHD---TATSDQTSEVKKFECQFCHREFANSQALGGHQNAH 1
           P  +  +STL+L GFSV +  +     T      +KKFECQ+CHR FANSQALGGHQNAH
Sbjct: 12  PQKKPPSSTLKLLGFSVKRYQEELPATTPFNIEYIKKFECQYCHRGFANSQALGGHQNAH 71


>ref|XP_004171266.1| PREDICTED: zinc finger protein 6-like [Cucumis sativus]
          Length = 213

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 10/70 (14%)
 Frame = -2

Query: 180 SRKPSDQKATSTLRLFGFSVTQQHDTATSDQTSEV----------KKFECQFCHREFANS 31
           +++ ++  AT+ L+LFGF V +  D   S  TS            +K+ECQ+C+REFANS
Sbjct: 10  TKQNNNNPATTRLKLFGFDVQEDLDQDDSTPTSSDSGAAVPSSGDRKYECQYCYREFANS 69

Query: 30  QALGGHQNAH 1
           QALGGHQNAH
Sbjct: 70  QALGGHQNAH 79


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