BLASTX nr result
ID: Coptis24_contig00025742
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00025742 (379 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFN88207.1| integrase core domain containing protein [Phaseol... 107 8e-22 gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar] 102 3e-20 emb|CAN63534.1| hypothetical protein VITISV_001206 [Vitis vinifera] 102 3e-20 emb|CAN62317.1| hypothetical protein VITISV_026526 [Vitis vinifera] 102 3e-20 emb|CAN71748.1| hypothetical protein VITISV_019194 [Vitis vinifera] 102 3e-20 >gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris] Length = 1387 Score = 107 bits (268), Expect = 8e-22 Identities = 56/126 (44%), Positives = 77/126 (61%) Frame = +2 Query: 2 VTFSPNSCVFQDFLTKKVIGSGYEXXXXXXXXXXXXXXXXXISPLQLHYRLGHPSLSKLR 181 ++F+ +S QD + ++IG+G E SP +H RLGHPSL+K++ Sbjct: 437 ISFTKDSVSLQDRCSGRMIGTGCESHGLYQLQISAHVGAIMDSPSLIHARLGHPSLAKMQ 496 Query: 182 QVVPNLSSNSKLESEACQLGKHHRSSFPSRVERRKLRLFDVVHTDIWGLN*IKKLSGFSY 361 Q+VP+LS+ S L E+CQ GKH RSSFPS V +R F +VH+DIWG + IK GF Y Sbjct: 497 QLVPSLSNVSSLSCESCQFGKHIRSSFPSSVSQRASSPFALVHSDIWGPSRIKSNLGFQY 556 Query: 362 FVIFVD 379 FV F+D Sbjct: 557 FVTFID 562 >gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar] Length = 1382 Score = 102 bits (254), Expect = 3e-20 Identities = 50/129 (38%), Positives = 72/129 (55%), Gaps = 3/129 (2%) Frame = +2 Query: 2 VTFSPNSCVFQDFLTKKVIGSGYEXXXXXXXXXXXXXXXXXIS---PLQLHYRLGHPSLS 172 V+F P+ CVFQD +TK+ G G+ +S P++ H RLGHPSL Sbjct: 411 VSFFPDHCVFQDLMTKRTFGKGHVSDGLYILDEWVPRPVACVSTASPVEAHCRLGHPSLP 470 Query: 173 KLRQVVPNLSSNSKLESEACQLGKHHRSSFPSRVERRKLRLFDVVHTDIWGLN*IKKLSG 352 L+++ P + L+ E+C KHHRSS R+ +R LF++VH+D+WG + +G Sbjct: 471 VLKKLCPQFDTLPSLDCESCHFAKHHRSSLGPRLNKRAESLFELVHSDVWGPCPVTSQTG 530 Query: 353 FSYFVIFVD 379 F YFV FVD Sbjct: 531 FRYFVTFVD 539 >emb|CAN63534.1| hypothetical protein VITISV_001206 [Vitis vinifera] Length = 1189 Score = 102 bits (254), Expect = 3e-20 Identities = 50/129 (38%), Positives = 72/129 (55%), Gaps = 3/129 (2%) Frame = +2 Query: 2 VTFSPNSCVFQDFLTKKVIGSGYEXXXXXXXXXXXXXXXXXIS---PLQLHYRLGHPSLS 172 V+F P+ CVFQD +TK+ G G+ +S P++ H RLGHPSL Sbjct: 411 VSFFPDHCVFQDLMTKRTFGKGHVSDGLYILDEWVPRPVACVSTASPVEAHCRLGHPSLP 470 Query: 173 KLRQVVPNLSSNSKLESEACQLGKHHRSSFPSRVERRKLRLFDVVHTDIWGLN*IKKLSG 352 L+++ P + L+ E+C KHHRSS R+ +R LF++VH+D+WG + +G Sbjct: 471 VLKKLCPQFDTLPSLDCESCHFAKHHRSSLGPRLNKRAESLFELVHSDVWGPCPVTSQTG 530 Query: 353 FSYFVIFVD 379 F YFV FVD Sbjct: 531 FRYFVTFVD 539 >emb|CAN62317.1| hypothetical protein VITISV_026526 [Vitis vinifera] Length = 768 Score = 102 bits (254), Expect = 3e-20 Identities = 56/128 (43%), Positives = 71/128 (55%), Gaps = 2/128 (1%) Frame = +2 Query: 2 VTFSPNSCVFQDFLTKKVIGSGYEXXXXXXXXXXXXXXXXXIS--PLQLHYRLGHPSLSK 175 +TFS S + QD T K IG G E + PL +H RLGHPSLSK Sbjct: 350 ITFSNKSVILQDRSTGKTIGIGRESQGLYHLTSPSSPAACISTDAPLLIHSRLGHPSLSK 409 Query: 176 LRQVVPNLSSNSKLESEACQLGKHHRSSFPSRVERRKLRLFDVVHTDIWGLN*IKKLSGF 355 +++VP+ S+ S L E+CQLGKH R SFP R+ R F++VHTD+WG GF Sbjct: 410 FQKMVPHFSTLSSLTCESCQLGKHTRVSFPKRLNNRAKSPFELVHTDVWGPCQTTSTLGF 469 Query: 356 SYFVIFVD 379 YFV F+D Sbjct: 470 QYFVTFID 477 >emb|CAN71748.1| hypothetical protein VITISV_019194 [Vitis vinifera] Length = 1306 Score = 102 bits (254), Expect = 3e-20 Identities = 50/129 (38%), Positives = 72/129 (55%), Gaps = 3/129 (2%) Frame = +2 Query: 2 VTFSPNSCVFQDFLTKKVIGSGYEXXXXXXXXXXXXXXXXXIS---PLQLHYRLGHPSLS 172 V+F P+ CVFQD +TK+ G G+ +S P++ H RLGHPSL Sbjct: 411 VSFFPDHCVFQDLMTKRTFGKGHVSDGLYILDEWVPRPVACVSTASPVEAHCRLGHPSLP 470 Query: 173 KLRQVVPNLSSNSKLESEACQLGKHHRSSFPSRVERRKLRLFDVVHTDIWGLN*IKKLSG 352 L+++ P + L+ E+C KHHRSS R+ +R LF++VH+D+WG + +G Sbjct: 471 VLKKLCPQFDTLPSLDCESCHFAKHHRSSLGPRLNKRAESLFELVHSDVWGPCPVTSQTG 530 Query: 353 FSYFVIFVD 379 F YFV FVD Sbjct: 531 FRYFVTFVD 539