BLASTX nr result

ID: Coptis24_contig00025739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025739
         (767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFX72873.1| MADS-box protein AGL84 [Aquilegia coerulea]            160   4e-37
ref|XP_002279507.1| PREDICTED: agamous-like MADS-box protein AGL...   155   1e-35
ref|XP_003552882.1| PREDICTED: agamous-like MADS-box protein AGL...   150   4e-34
ref|XP_002520092.1| mads box protein, putative [Ricinus communis...   149   8e-34
ref|XP_003537440.1| PREDICTED: agamous-like MADS-box protein AGL...   144   2e-32

>gb|AFX72873.1| MADS-box protein AGL84 [Aquilegia coerulea]
          Length = 241

 Score =  160 bits (404), Expect = 4e-37
 Identities = 94/216 (43%), Positives = 124/216 (57%), Gaps = 16/216 (7%)
 Frame = +2

Query: 2   IVYGPYDPQPDVW-HSPSEVHRVLMRFKSMPEMEQSKKMMNQEGFLRQRVVKLNEQLKRQ 178
           IVYGP DPQPDVW  SPSE HRVL RFKSMPEMEQSKKMMNQEG LRQ + K+ EQLK+Q
Sbjct: 46  IVYGPEDPQPDVWPSSPSEAHRVLTRFKSMPEMEQSKKMMNQEGLLRQGISKVKEQLKKQ 105

Query: 179 QRENREQEITQLMNQGMMGKSLHDVSMEDLGDLGWLIEEKLKVVRAKMEVQRKAMAAPQM 358
           Q+ENR  E+TQLM + + G++L DV  + L  L  +I+EK+K ++ +++V R   + P  
Sbjct: 106 QKENRNFELTQLMYRSLNGEALPDVGTDVLHALEGVIDEKMKAIQERIDVLRGTTSVPPQ 165

Query: 359 NIGNERMQXXXXXXXXXXXXXXXNGFNMDMSMESLQRQQSWFVEMMNSEPQEQRPNNN-- 532
            I                     NG   +M ME++QRQ+ W+  MM++ PQEQ+      
Sbjct: 166 LI---------------------NGTGAEMEMEAVQRQK-WYEAMMHNPPQEQQQQQQQQ 203

Query: 533 ----------AYFGDDLVTTH---YGDATAWPKNFF 601
                      Y+G      +   YGD   WP + F
Sbjct: 204 QQQQQQHQSAGYYGGGNEFANGVPYGDHAPWPNHHF 239


>ref|XP_002279507.1| PREDICTED: agamous-like MADS-box protein AGL80 [Vitis vinifera]
           gi|296089853|emb|CBI39672.3| unnamed protein product
           [Vitis vinifera]
          Length = 236

 Score =  155 bits (391), Expect = 1e-35
 Identities = 92/208 (44%), Positives = 125/208 (60%), Gaps = 8/208 (3%)
 Frame = +2

Query: 2   IVYGPYDPQPDVWHSPSEVHRVLMRFKSMPEMEQSKKMMNQEGFLRQRVVKLNEQLKRQQ 181
           I+Y PYD QP+VW SP  V RVL  FK MPEMEQSKKM+NQE FLRQR+ K NEQLK+Q+
Sbjct: 46  ILYSPYDSQPEVWPSPLGVQRVLAHFKKMPEMEQSKKMVNQESFLRQRIAKGNEQLKKQR 105

Query: 182 RENREQEITQLMNQGMMGKSLHDVSMEDLGDLGWLIEEKLKVVRAKME-----VQRKAMA 346
           ++NRE+EITQ+M Q + GK L ++++ DL DLGW+I++ LK +  ++E      Q +A A
Sbjct: 106 KDNREKEITQVMYQSLTGKGLQNLNIVDLNDLGWMIDQNLKDIHKRIESLNKEAQSQAAA 165

Query: 347 APQMNIGNERMQXXXXXXXXXXXXXXXNGFNMDMSMESLQRQQSWFVEMMNSEPQEQRPN 526
           A     G                      F+   SM+++QRQQ WFV+++N  P EQ   
Sbjct: 166 AAAAAAGQ-------LIKTGGKAQEEKPAFD---SMDAIQRQQ-WFVDLVN--PNEQM-- 210

Query: 527 NNAYFGDDLVTTHYGD---ATAWPKNFF 601
              + GDD++   +GD      WP  FF
Sbjct: 211 --GFAGDDMMLP-FGDNNHNALWPNGFF 235


>ref|XP_003552882.1| PREDICTED: agamous-like MADS-box protein AGL80-like [Glycine max]
          Length = 239

 Score =  150 bits (378), Expect = 4e-34
 Identities = 78/169 (46%), Positives = 112/169 (66%), Gaps = 2/169 (1%)
 Frame = +2

Query: 2   IVYGPYDPQPDVWHSPSEVHRVLMRFKSMPEMEQSKKMMNQEGFLRQRVVKLNEQLKRQQ 181
           IVY PYDPQP+VW SP  V RVL +F+ MPE+EQSKKM+NQE FLRQR++K  +QLK+Q+
Sbjct: 46  IVYSPYDPQPEVWPSPMGVQRVLAKFRRMPELEQSKKMVNQESFLRQRIMKAKDQLKKQR 105

Query: 182 RENREQEITQLMNQGM-MGKSLHDVSMEDLGDLGWLIEEKLKVVRAKMEVQRK-AMAAPQ 355
           ++NRE+E+TQLM Q +  GK +H++SM DL DL WLI++ LK +  ++EV  K A + PQ
Sbjct: 106 KDNREKEMTQLMFQYLSAGKIMHNISMVDLNDLAWLIDQNLKDINRRIEVLTKNAQSQPQ 165

Query: 356 MNIGNERMQXXXXXXXXXXXXXXXNGFNMDMSMESLQRQQSWFVEMMNS 502
           +                        GF+++M    L ++Q+WF+ +MN+
Sbjct: 166 IAAPAVTDVAAKVEDKGQGSQHGHQGFDINM---DLMQKQNWFMNLMNN 211


>ref|XP_002520092.1| mads box protein, putative [Ricinus communis]
           gi|223540720|gb|EEF42281.1| mads box protein, putative
           [Ricinus communis]
          Length = 251

 Score =  149 bits (375), Expect = 8e-34
 Identities = 89/216 (41%), Positives = 131/216 (60%), Gaps = 16/216 (7%)
 Frame = +2

Query: 2   IVYGPYDPQPDVWHSPSEVHRVLMRFKSMPEMEQSKKMMNQEGFLRQRVVKLNEQLKRQQ 181
           I+Y PYD QP+VW S  EV RVL +FK+MPEMEQSKKM+NQE FLRQR+ K NEQLK+Q+
Sbjct: 46  IIYSPYDAQPEVWPSAIEVQRVLSQFKNMPEMEQSKKMVNQESFLRQRIGKANEQLKKQR 105

Query: 182 RENREQEITQLMNQGMMGKSLHDVSMEDLGDLGWLIEEKLKVVRAKM-----EVQRKAMA 346
           ++NRE+E+TQ+M Q + GK+L++++M DL DLGW+I + LK +  K+     E+ R+  A
Sbjct: 106 KDNREKEVTQVMFQSLTGKTLNNLNMMDLNDLGWIINQYLKDIYKKVETVSKEINRQVTA 165

Query: 347 AP--------QMNIGNERMQXXXXXXXXXXXXXXXNGFNMDMSMESLQRQQSWFVEMMNS 502
           AP        Q+   +   Q                    +++ME++QRQQ W ++++N 
Sbjct: 166 APPPPSPPPQQLPPPSGPAQAIAEVAPSQQAAERQ---AFEVNMEAMQRQQ-WIMDLIN- 220

Query: 503 EPQEQRPNNNAYFGDDLVTTHYGD---ATAWPKNFF 601
            P E    N  + GD+++   +GD    + W   FF
Sbjct: 221 -PHE----NMGFIGDEMMLP-FGDHNHNSLWSNAFF 250


>ref|XP_003537440.1| PREDICTED: agamous-like MADS-box protein AGL80-like [Glycine max]
          Length = 251

 Score =  144 bits (364), Expect = 2e-32
 Identities = 79/186 (42%), Positives = 116/186 (62%), Gaps = 4/186 (2%)
 Frame = +2

Query: 2   IVYGPYDPQPDVWHSPSEVHRVLMRFKSMPEMEQSKKMMNQEGFLRQRVVKLNEQLKRQQ 181
           IVY  YDPQP+VW SP  V RVL +F+ MPE+EQSKKM+NQE FLRQR++K  +QLK+Q+
Sbjct: 46  IVYSSYDPQPEVWPSPMGVQRVLSKFRRMPELEQSKKMVNQESFLRQRIMKAKDQLKKQR 105

Query: 182 RENREQEITQLMNQGM-MGKSLHDVSMEDLGDLGWLIEEKLKVVRAKMEVQRK-AMAAPQ 355
           ++NRE+E+TQLM Q +  GK +H++SM DL DL WLI++ LK +  ++EV  K   + PQ
Sbjct: 106 KDNREKEMTQLMFQYLSAGKIMHNISMVDLNDLAWLIDQNLKDINRRIEVLTKNVQSQPQ 165

Query: 356 MNIGNERMQXXXXXXXXXXXXXXXNGFNMDMSMESLQRQQSWFVEMMNSEPQEQRPNNNA 535
           +                        GF++++    L ++Q+WF+ +MN+   +    N A
Sbjct: 166 IAAPVVTDVVAKVEDNGQGSQHGQQGFDINV---DLMQKQNWFMNLMNNGSGDGGAGNEA 222

Query: 536 --YFGD 547
             + GD
Sbjct: 223 MPFVGD 228


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