BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025731
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283336.1| PREDICTED: F-box protein At3g12350 [Vitis vi...   102   4e-20
emb|CAN72848.1| hypothetical protein VITISV_013938 [Vitis vinifera]   102   4e-20
ref|XP_004142896.1| PREDICTED: F-box protein At3g12350-like [Cuc...    79   4e-13
ref|XP_002301146.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
gb|ABK92530.1| unknown [Populus trichocarpa]                           69   4e-10

>ref|XP_002283336.1| PREDICTED: F-box protein At3g12350 [Vitis vinifera]
          Length = 469

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/87 (58%), Positives = 62/87 (71%)
 Frame = -1

Query: 263 PSKTGGYGVIKTPFLWMGISPKGEVVNFLDPDCKFESSGEFVKAAELGVLETDLVSVNVS 84
           PS+ G Y VIK PFL M I+P+GE +NFLDPD K ESS +FV A + G LE DL+ V+VS
Sbjct: 128 PSRLGTYHVIKAPFLCMSITPEGETMNFLDPDGKIESSEDFVNAVQAGFLENDLIPVHVS 187

Query: 83  SMGKNHIVVEENQPSSSAYSPEGKKSG 3
            MGKNH+VVEEN   +S  S E K +G
Sbjct: 188 FMGKNHVVVEENLSFTSLNSQEPKNTG 214


>emb|CAN72848.1| hypothetical protein VITISV_013938 [Vitis vinifera]
          Length = 469

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/87 (58%), Positives = 62/87 (71%)
 Frame = -1

Query: 263 PSKTGGYGVIKTPFLWMGISPKGEVVNFLDPDCKFESSGEFVKAAELGVLETDLVSVNVS 84
           PS+ G Y VIK PFL M I+P+GE +NFLDPD K ESS +FV A + G LE DL+ V+VS
Sbjct: 128 PSRLGTYHVIKAPFLCMSITPEGETMNFLDPDGKIESSEDFVNAVQAGFLENDLIPVHVS 187

Query: 83  SMGKNHIVVEENQPSSSAYSPEGKKSG 3
            MGKNH+VVEEN   +S  S E K +G
Sbjct: 188 FMGKNHVVVEENLSFTSLNSQEPKNTG 214


>ref|XP_004142896.1| PREDICTED: F-box protein At3g12350-like [Cucumis sativus]
           gi|449482721|ref|XP_004156384.1| PREDICTED: F-box
           protein At3g12350-like [Cucumis sativus]
          Length = 465

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 37/87 (42%), Positives = 54/87 (62%)
 Frame = -1

Query: 263 PSKTGGYGVIKTPFLWMGISPKGEVVNFLDPDCKFESSGEFVKAAELGVLETDLVSVNVS 84
           PSK G Y V K+PFLWM +S +G+ ++F++ D + E +G+F    E    + DL+ +++S
Sbjct: 130 PSKNGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSDCDLIPIDLS 189

Query: 83  SMGKNHIVVEENQPSSSAYSPEGKKSG 3
            MGKNH V+EEN       SPE  K G
Sbjct: 190 FMGKNHFVIEENLAFPYPTSPERSKKG 216


>ref|XP_002301146.1| predicted protein [Populus trichocarpa] gi|222842872|gb|EEE80419.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/66 (51%), Positives = 45/66 (68%)
 Frame = -1

Query: 245 YGVIKTPFLWMGISPKGEVVNFLDPDCKFESSGEFVKAAELGVLETDLVSVNVSSMGKNH 66
           Y VIK+PFLW+ ISP+GE+VN+LDP    E   +     ELG L+ D+V VNV+ +G +H
Sbjct: 130 YSVIKSPFLWISISPEGEIVNYLDP----EGQNKNKLFGELGYLDMDVVPVNVNFIGDSH 185

Query: 65  IVVEEN 48
             VEEN
Sbjct: 186 FSVEEN 191


>gb|ABK92530.1| unknown [Populus trichocarpa]
          Length = 298

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/66 (51%), Positives = 45/66 (68%)
 Frame = -1

Query: 245 YGVIKTPFLWMGISPKGEVVNFLDPDCKFESSGEFVKAAELGVLETDLVSVNVSSMGKNH 66
           Y VIK+PFLW+ ISP+GE+VN+LDP    E   +     ELG L+ D+V VNV+ +G +H
Sbjct: 130 YSVIKSPFLWISISPEGEIVNYLDP----EGQNKNKLFGELGYLDMDVVPVNVNFIGDSH 185

Query: 65  IVVEEN 48
             VEEN
Sbjct: 186 FSVEEN 191