BLASTX nr result

ID: Coptis24_contig00025727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025727
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542180.1| PREDICTED: uncharacterized protein LOC100797...   116   4e-24
ref|XP_003626504.1| hypothetical protein MTR_7g116610 [Medicago ...   116   5e-24
ref|XP_003554738.1| PREDICTED: uncharacterized protein LOC100777...   115   9e-24
ref|XP_002303082.1| predicted protein [Populus trichocarpa] gi|2...   114   2e-23
ref|XP_002525478.1| hypothetical protein RCOM_1122760 [Ricinus c...   114   3e-23

>ref|XP_003542180.1| PREDICTED: uncharacterized protein LOC100797475 [Glycine max]
          Length = 146

 Score =  116 bits (291), Expect = 4e-24
 Identities = 74/157 (47%), Positives = 96/157 (61%), Gaps = 2/157 (1%)
 Frame = -2

Query: 599 FKRSHVPAFGNWDYEDGLPITQYFESARQAGLFRYTY--NGEADLYSCSGYDYEQDLYKK 426
           ++R HVPAFG+WD+ D LP TQ FESARQAGL RY Y  + + DLY  +G  YE D + K
Sbjct: 6   YQRHHVPAFGSWDWNDNLPFTQCFESARQAGLLRYGYSESEDRDLY-VTGDLYEND-FVK 63

Query: 425 PATITVVPRRKMKTKEADYQPHVTGQRKQRKVYDVEQTARQRQQCQKSKTVLPSNRAPKA 246
           PA I VVPRR+ K +  + +     ++KQ  V +V++        Q+ K        PK 
Sbjct: 64  PAVI-VVPRRREKVRCQNEK----DEKKQNWVSNVKELPSPTSPIQRPK--------PKP 110

Query: 245 VDEDLYKIPPELLYSSYPKKKRTFGFFSRCLVPSCSA 135
           VDEDLYKI PELLY+   +KKR   FF  CL+P+C A
Sbjct: 111 VDEDLYKISPELLYAK-NRKKRGLCFFPSCLMPTCIA 146


>ref|XP_003626504.1| hypothetical protein MTR_7g116610 [Medicago truncatula]
           gi|355501519|gb|AES82722.1| hypothetical protein
           MTR_7g116610 [Medicago truncatula]
          Length = 164

 Score =  116 bits (290), Expect = 5e-24
 Identities = 73/168 (43%), Positives = 98/168 (58%), Gaps = 17/168 (10%)
 Frame = -2

Query: 596 KRSHVPAFGNWDYEDGLPITQYFESARQAGLFRY-TYNGEADLY---SCSGYDYEQDLYK 429
           +   +PAFGNWD+ + LPITQYFE+ARQAGL RY + +GE+D Y       +D     YK
Sbjct: 3   RSGQIPAFGNWDFANELPITQYFETARQAGLIRYSSSSGESDPYVHVRAEHHDLYAVEYK 62

Query: 428 KPATITVVPRRKMKTKEADYQPHVTGQ--------RKQRKVYDVEQTARQRQQCQKSKTV 273
           KP       R+  + +E  YQ  +  +        ++Q KVYDV +    R+Q  K+K V
Sbjct: 63  KPV------RKATRNRERKYQNVMVNEKETTMNMRKQQGKVYDVME--HPRKQMNKNKKV 114

Query: 272 -----LPSNRAPKAVDEDLYKIPPELLYSSYPKKKRTFGFFSRCLVPS 144
                L   R PK VDEDLYKIPPELL ++  K+K+  GF S+CLVP+
Sbjct: 115 HVSAPLQPTRLPKPVDEDLYKIPPELLRTT--KRKKMLGFISKCLVPA 160


>ref|XP_003554738.1| PREDICTED: uncharacterized protein LOC100777580 [Glycine max]
          Length = 179

 Score =  115 bits (288), Expect = 9e-24
 Identities = 75/175 (42%), Positives = 99/175 (56%), Gaps = 24/175 (13%)
 Frame = -2

Query: 596 KRSHVPAFGNWDYEDGLPITQYFESARQAGLFRY-TYNGEADLYSCSGYDYEQDLYKK-- 426
           +   +PAFGNWDY + LPITQYFESARQAGL RY + +GE+D Y  +  D     +KK  
Sbjct: 3   RSGQIPAFGNWDYANELPITQYFESARQAGLVRYSSSSGESDPYVRADRDLYAVDFKKPP 62

Query: 425 -----PATITVVPRRK------MKTKEADYQPHVTGQRKQRKVYDVEQTARQRQQCQKS- 282
                P+T+    R +      +K KE + +      RKQ KV DV + AR+     K  
Sbjct: 63  IRNMPPSTLKKATRNRGRRCVVVKEKEKEKESVKMNMRKQGKVCDVTEQARKPVTVSKEM 122

Query: 281 --------KTVLPSN-RAPKAVDEDLYKIPPELLYSSYPKKKRTFGFFSRCLVPS 144
                   ++ LP   R PK VDEDLYKIPPELL ++  K+K+  GF S+CLVP+
Sbjct: 123 MRLHDAVPRSPLPRGVRLPKPVDEDLYKIPPELLRTT--KRKKMLGFISKCLVPA 175


>ref|XP_002303082.1| predicted protein [Populus trichocarpa] gi|222844808|gb|EEE82355.1|
           predicted protein [Populus trichocarpa]
          Length = 147

 Score =  114 bits (285), Expect = 2e-23
 Identities = 66/154 (42%), Positives = 93/154 (60%)
 Frame = -2

Query: 599 FKRSHVPAFGNWDYEDGLPITQYFESARQAGLFRYTYNGEADLYSCSGYDYEQDLYKKPA 420
           + RSHVPAFG+WD+ + +P TQ FESARQAGL RY+Y+ + DLY  +G  YE D+     
Sbjct: 6   YSRSHVPAFGSWDWNNDMPFTQCFESARQAGLLRYSYSEDRDLY-VAGDLYENDVV--TP 62

Query: 419 TITVVPRRKMKTKEADYQPHVTGQRKQRKVYDVEQTARQRQQCQKSKTVLPSNRAPKAVD 240
           T+ VVPRR+ K +    +     + K+ + + V    ++      S   + +   PK VD
Sbjct: 63  TMIVVPRRREKMRRPRAK-----EEKREQSWAVTSDVKE----SPSPPPMSTRPTPKPVD 113

Query: 239 EDLYKIPPELLYSSYPKKKRTFGFFSRCLVPSCS 138
           EDLYKI PELLY+   KK+    FFS CL+P+C+
Sbjct: 114 EDLYKISPELLYAK-TKKRGGLCFFSSCLMPACA 146


>ref|XP_002525478.1| hypothetical protein RCOM_1122760 [Ricinus communis]
           gi|223535291|gb|EEF36968.1| hypothetical protein
           RCOM_1122760 [Ricinus communis]
          Length = 186

 Score =  114 bits (284), Expect = 3e-23
 Identities = 79/189 (41%), Positives = 105/189 (55%), Gaps = 31/189 (16%)
 Frame = -2

Query: 608 MDDFKRS-HVPAFGNWDYEDGLPITQYFESARQAGLFRYTYNGEADLY--SCSGYDYEQD 438
           MD++KRS  +PAFG+W++ + LPITQYFE ARQAGL RY+ +GE + Y    SG     D
Sbjct: 1   MDEWKRSGQIPAFGDWEHANELPITQYFECARQAGLIRYSSSGECEQYMRGGSGGSGSGD 60

Query: 437 LY----KKPATITVVPRRKMK-------TKEADYQPHVTGQRKQRKVYDVEQTARQRQQC 291
           LY    +KP+     P RK +       ++      HV  Q+KQ +V DV +  R++ Q 
Sbjct: 61  LYATDVRKPSRDLGPPPRKTRGVSGERNSRVPSSLSHVKEQKKQGRVCDVTEPPRKQHQA 120

Query: 290 QKSKTVLPSN-----------------RAPKAVDEDLYKIPPELLYSSYPKKKRTFGFFS 162
             S     SN                 R  KAVDEDLYKIPPELL SS  K+K+  G F+
Sbjct: 121 AVSTYSNASNAKKDVNGISLQHRPRPVRPSKAVDEDLYKIPPELLRSS--KRKKMPGLFA 178

Query: 161 RCLVPSCSA 135
            CLVP+C++
Sbjct: 179 -CLVPACAS 186


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