BLASTX nr result

ID: Coptis24_contig00025713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025713
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284111.1| PREDICTED: zinc finger protein ZAT12-like [V...   139   2e-31
ref|XP_003552680.1| PREDICTED: zinc finger protein ZAT11-like [G...   135   3e-30
ref|XP_002284384.1| PREDICTED: zinc finger protein ZAT11 [Vitis ...   135   3e-30
emb|CAN64128.1| hypothetical protein VITISV_022422 [Vitis vinifera]   135   3e-30
ref|XP_002528469.1| nucleic acid binding protein, putative [Rici...   135   5e-30

>ref|XP_002284111.1| PREDICTED: zinc finger protein ZAT12-like [Vitis vinifera]
          Length = 176

 Score =  139 bits (350), Expect = 2e-31
 Identities = 76/116 (65%), Positives = 84/116 (72%), Gaps = 3/116 (2%)
 Frame = -1

Query: 365 MTMKRSRVDPKDLANMANCLMLLSQG-EINSKISPPSRVFVCKTCNRKFSSFQALGGHRA 189
           MTMKR R    +  ++ANCLMLLS+G + +S    PSRVF CKTCNR+F SFQALGGHRA
Sbjct: 1   MTMKRMRDGEHESVSIANCLMLLSRGTDYDSIARVPSRVFECKTCNRQFPSFQALGGHRA 60

Query: 188 SHKKPKQMA--GDLSPHSRMISHSTSKAHECSICGLEFAIGQALGGHMRRHRAIIS 27
           SHKKP+ MA  GD  P     S    K HECSICGLEFAIGQALGGHMRRHRA  S
Sbjct: 61  SHKKPRLMALNGD-DPAQLQSSPLKPKTHECSICGLEFAIGQALGGHMRRHRAAAS 115


>ref|XP_003552680.1| PREDICTED: zinc finger protein ZAT11-like [Glycine max]
          Length = 175

 Score =  135 bits (340), Expect = 3e-30
 Identities = 73/112 (65%), Positives = 78/112 (69%), Gaps = 4/112 (3%)
 Frame = -1

Query: 359 MKRSRVDPKDLANMANCLMLLSQGE----INSKISPPSRVFVCKTCNRKFSSFQALGGHR 192
           MKR R    D   MANCLMLLS+G       S  S  +RVF CKTCNR+F SFQALGGHR
Sbjct: 1   MKRER--EVDSLTMANCLMLLSRGSEFEATYSSTSMSNRVFECKTCNRQFPSFQALGGHR 58

Query: 191 ASHKKPKQMAGDLSPHSRMISHSTSKAHECSICGLEFAIGQALGGHMRRHRA 36
           ASHKKP+ MAGD+       S    K HECSICGLEFAIGQALGGHMRRHRA
Sbjct: 59  ASHKKPRLMAGDIEGQLLHDSPPKPKTHECSICGLEFAIGQALGGHMRRHRA 110


>ref|XP_002284384.1| PREDICTED: zinc finger protein ZAT11 [Vitis vinifera]
          Length = 159

 Score =  135 bits (340), Expect = 3e-30
 Identities = 75/114 (65%), Positives = 82/114 (71%), Gaps = 4/114 (3%)
 Frame = -1

Query: 359 MKRSRVDPKDLAN---MANCLMLLSQ-GEINSKISPPSRVFVCKTCNRKFSSFQALGGHR 192
           MKRSRVD  D      MANCLMLLS+ G+  S    P RVF CKTCNRKF SFQALGGHR
Sbjct: 1   MKRSRVDGVDEVEALAMANCLMLLSRVGKSESTNQLPGRVFECKTCNRKFPSFQALGGHR 60

Query: 191 ASHKKPKQMAGDLSPHSRMISHSTSKAHECSICGLEFAIGQALGGHMRRHRAII 30
           ASHKKP+ M  +L   +   S +  K HECSICGLEFAIGQALGGHMRRHR+ I
Sbjct: 61  ASHKKPRLMGDELQLPT---SPAKPKTHECSICGLEFAIGQALGGHMRRHRSEI 111


>emb|CAN64128.1| hypothetical protein VITISV_022422 [Vitis vinifera]
          Length = 647

 Score =  135 bits (340), Expect = 3e-30
 Identities = 75/114 (65%), Positives = 82/114 (71%), Gaps = 4/114 (3%)
 Frame = -1

Query: 359 MKRSRVDPKDLAN---MANCLMLLSQ-GEINSKISPPSRVFVCKTCNRKFSSFQALGGHR 192
           MKRSRVD  D      MANCLMLLS+ G+  S    P RVF CKTCNRKF SFQALGGHR
Sbjct: 1   MKRSRVDGVDEVEALAMANCLMLLSRVGKSESTNQLPGRVFECKTCNRKFPSFQALGGHR 60

Query: 191 ASHKKPKQMAGDLSPHSRMISHSTSKAHECSICGLEFAIGQALGGHMRRHRAII 30
           ASHKKP+ M  +L   +   S +  K HECSICGLEFAIGQALGGHMRRHR+ I
Sbjct: 61  ASHKKPRLMGDELQLPT---SPAKPKTHECSICGLEFAIGQALGGHMRRHRSEI 111


>ref|XP_002528469.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223532145|gb|EEF33952.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 190

 Score =  135 bits (339), Expect = 5e-30
 Identities = 78/131 (59%), Positives = 86/131 (65%), Gaps = 12/131 (9%)
 Frame = -1

Query: 359 MKRS-RVDPKDLANMANCLMLLSQG-EINS----------KISPPSRVFVCKTCNRKFSS 216
           MKRS R    D  +MANCLMLLSQG EI S           I+  +RVF CKTCNR+F S
Sbjct: 1   MKRSFREAEIDSLSMANCLMLLSQGREIVSFPSFEAMKGTNINSSNRVFECKTCNRQFPS 60

Query: 215 FQALGGHRASHKKPKQMAGDLSPHSRMISHSTSKAHECSICGLEFAIGQALGGHMRRHRA 36
           FQALGGHRASHKKP+   GD+       S +  K HECSICGLEFAIGQALGGHMRRHRA
Sbjct: 61  FQALGGHRASHKKPRLTNGDVGSLETQSSPAKPKTHECSICGLEFAIGQALGGHMRRHRA 120

Query: 35  IISSKCSSVPP 3
           I +   S   P
Sbjct: 121 INNDSSSLSTP 131


Top