BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025710
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    57   1e-06
emb|CAE02147.1| OSJNBa0081G05.2 [Oryza sativa Japonica Group] gi...    57   1e-06
gb|EEC77095.1| hypothetical protein OsI_15508 [Oryza sativa Indi...    57   1e-06
gb|AAM93462.1| putative reverse transcriptase [Oryza sativa Japo...    57   2e-06
ref|XP_002452893.1| hypothetical protein SORBIDRAFT_04g034505 [S...    57   2e-06

>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1936

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
 Frame = -1

Query: 372  LGAVREGFMWSLGNGSSIKTFTEPWLL--LNDKPVHLSDYVTDDFSFTAVERSGYVKDLV 199
            L  +++G +W +GNG+S++ + +PW+   L+ +PV          S  A  R  +V DL+
Sbjct: 1555 LDLLKKGIIWRIGNGNSVRIWRDPWIPRDLSRRPV----------SSKANCRLKWVSDLI 1604

Query: 198  VNDTTKWNQERLGKLFPKPIMECISLKSVRPNNQDKIIWWREDK-GMLTVKSAYKMLSRE 22
              D T W+  ++ + F K   + I    +    ++  I W  DK G  +V+SAYK+  + 
Sbjct: 1605 AEDGT-WDSAKINQYFLKIDADIIQKICISARLEEDFIAWHPDKTGRFSVRSAYKLALQL 1663

Query: 21   TEKGECS 1
             +   CS
Sbjct: 1664 ADMNNCS 1670


>emb|CAE02147.1| OSJNBa0081G05.2 [Oryza sativa Japonica Group]
            gi|116309213|emb|CAH66305.1| OSIGBa0135K14.2 [Oryza
            sativa Indica Group] gi|116309230|emb|CAH66320.1|
            OSIGBa0150M16.3 [Oryza sativa Indica Group]
          Length = 1711

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
 Frame = -1

Query: 372  LGAVREGFMWSLGNGSSIKTFTEPWLL--LNDKPVHLSDYVTDDFSFTAVERSGYVKDLV 199
            L  +++G +W +GNG+S++ + +PW+   L+ +PV          S  A  R  +V DL+
Sbjct: 1399 LDLLKKGIIWRIGNGNSVRIWRDPWIPKDLSRRPV----------SSKANCRLKWVSDLI 1448

Query: 198  VNDTTKWNQERLGKLFPKPIMECISLKSVRPNNQDKIIWWREDK-GMLTVKSAYKMLSRE 22
              D T W+  ++ + F K   + I    +    ++  I W  DK G  +V+SAYK+  + 
Sbjct: 1449 AEDGT-WDSAKINQYFLKIDADIIQKICISARLEEDFIAWHPDKTGRFSVRSAYKLALQL 1507

Query: 21   TEKGECS 1
             +   CS
Sbjct: 1508 ADMNNCS 1514


>gb|EEC77095.1| hypothetical protein OsI_15508 [Oryza sativa Indica Group]
          Length = 1296

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
 Frame = -1

Query: 372  LGAVREGFMWSLGNGSSIKTFTEPWLL--LNDKPVHLSDYVTDDFSFTAVERSGYVKDLV 199
            L  +++G +W +GNG+S++ + +PW+   L+ +PV          S  A  R  +V DL+
Sbjct: 1096 LDLLKKGIIWRIGNGNSVRIWRDPWIPKDLSRRPV----------SSKANCRLKWVSDLI 1145

Query: 198  VNDTTKWNQERLGKLFPKPIMECISLKSVRPNNQDKIIWWREDK-GMLTVKSAYKMLSRE 22
              D T W+  ++ + F K   + I    +    ++  I W  DK G  +V+SAYK+  + 
Sbjct: 1146 AEDGT-WDSAKINQYFLKIDADIIQKICISARLEEDFIAWHPDKTGRFSVRSAYKLALQL 1204

Query: 21   TEKGECS 1
             +   CS
Sbjct: 1205 ADMNNCS 1211


>gb|AAM93462.1| putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 566

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/115 (28%), Positives = 62/115 (53%)
 Frame = -1

Query: 378 KSLGAVREGFMWSLGNGSSIKTFTEPWLLLNDKPVHLSDYVTDDFSFTAVERSGYVKDLV 199
           K +  +R+G +W +GNG  I  +++PWL  + +      +VT     + + R   V +L+
Sbjct: 303 KGIQLLRKGVIWRVGNGEHINIWSDPWLPRDMR------FVTTRRGASLITR---VCELI 353

Query: 198 VNDTTKWNQERLGKLFPKPIMECISLKSVRPNNQDKIIWWREDKGMLTVKSAYKM 34
              T +W+ E + ++F +   + I+   +R   +D I W  + KG+ +VKSAYK+
Sbjct: 354 DPTTGQWDIELIQQIFNENDAKIITRIPLREGQEDFIAWQPDTKGIFSVKSAYKL 408


>ref|XP_002452893.1| hypothetical protein SORBIDRAFT_04g034505 [Sorghum bicolor]
           gi|241932724|gb|EES05869.1| hypothetical protein
           SORBIDRAFT_04g034505 [Sorghum bicolor]
          Length = 400

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
 Frame = -1

Query: 372 LGAVREGFMWSLGNGSSIKTFTEPWLLLNDKPVHLSDYVTDDFSFTAVERSGYVKDLVVN 193
           L  +++G +W +G+G  I+ + +PW+     P  LS+ V    S     R  +V +L+ +
Sbjct: 188 LSLLKKGVIWRVGDGRQIRIWRDPWI-----PRELSNRVA---SRRGRCRLHWVAELLKS 239

Query: 192 DTTKWNQERLGKLFPKPIMECISLKSVRPNNQDKIIWWREDK-GMLTVKSAYKMLSRETE 16
           D +  +Q RL   F    ++ IS   + P N D  + W+ +K GM +V+SAY +   E  
Sbjct: 240 DGSDRDQSRLRSYFCPADVDAISRIRLAPRNTDDFVAWQPEKNGMFSVRSAYNLAMMEKT 299

Query: 15  KGECS 1
           + ECS
Sbjct: 300 R-ECS 303