BLASTX nr result

ID: Coptis24_contig00025697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025697
         (1057 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39759.3| unnamed protein product [Vitis vinifera]              378   e-102
ref|XP_002270063.1| PREDICTED: uncharacterized protein LOC100258...   378   e-102
emb|CAN64060.1| hypothetical protein VITISV_000012 [Vitis vinifera]   378   e-102
ref|XP_002522783.1| conserved hypothetical protein [Ricinus comm...   371   e-100
ref|XP_002298877.1| predicted protein [Populus trichocarpa] gi|2...   363   5e-98

>emb|CBI39759.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  378 bits (971), Expect = e-102
 Identities = 185/275 (67%), Positives = 215/275 (78%), Gaps = 2/275 (0%)
 Frame = +1

Query: 1   ETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGEWHPGTPEALKGSYVFVCSHGSRD 180
           ETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGEW P TPE L GS +FVCSHGSRD
Sbjct: 147 ETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGEWQPVTPEKLIGSCIFVCSHGSRD 206

Query: 181 RRCGVCGPALVTRFSEEIDAHGLQGQVSVSPCSHIGGHKYAGNVIIFCRDVNGEVTGHWY 360
           RRCGVCGPA+V RF EEI++HGLQG+VSVSPCSHIGGHKYAGNVIIF  +++G+V+GHWY
Sbjct: 207 RRCGVCGPAVVARFKEEIESHGLQGKVSVSPCSHIGGHKYAGNVIIFGSNIDGKVSGHWY 266

Query: 361 GYVTPDDVPILLEQHIGKGEIIDQLWRGQMGLSEDDQKKAQELRLQLSSETGMEKGTKVS 540
           GYVTPDDVPILLEQHI KGEI+  LWRGQMGLSE++Q K+QELR+QL+  TG  K TK +
Sbjct: 267 GYVTPDDVPILLEQHIEKGEIVYGLWRGQMGLSEEEQTKSQELRVQLNGGTGDGKPTKET 326

Query: 541 I--QTFEAGHPGNCNQVEVAGCCQGIANTICCQNSVSAXXXXXXXXXDRKEPLAAAGRNT 714
           +  QT E       +Q+EV  CCQ   N+ CCQN V +         +R+  +    + +
Sbjct: 327 LQTQTNEMDTAACGSQIEVMACCQENGNSSCCQNPVLS--GKMEKLFEREAKVTPEKKKS 384

Query: 715 SGKQINRTIKGRGACTRKVCAMPTWFESWEREDTY 819
           S   I+R+   + ACTRKVCAMPTWFESWEREDTY
Sbjct: 385 SKMTISRSSSNKSACTRKVCAMPTWFESWEREDTY 419


>ref|XP_002270063.1| PREDICTED: uncharacterized protein LOC100258311 [Vitis vinifera]
          Length = 432

 Score =  378 bits (971), Expect = e-102
 Identities = 185/275 (67%), Positives = 215/275 (78%), Gaps = 2/275 (0%)
 Frame = +1

Query: 1   ETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGEWHPGTPEALKGSYVFVCSHGSRD 180
           ETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGEW P TPE L GS +FVCSHGSRD
Sbjct: 137 ETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGEWQPVTPEKLIGSCIFVCSHGSRD 196

Query: 181 RRCGVCGPALVTRFSEEIDAHGLQGQVSVSPCSHIGGHKYAGNVIIFCRDVNGEVTGHWY 360
           RRCGVCGPA+V RF EEI++HGLQG+VSVSPCSHIGGHKYAGNVIIF  +++G+V+GHWY
Sbjct: 197 RRCGVCGPAVVARFKEEIESHGLQGKVSVSPCSHIGGHKYAGNVIIFGSNIDGKVSGHWY 256

Query: 361 GYVTPDDVPILLEQHIGKGEIIDQLWRGQMGLSEDDQKKAQELRLQLSSETGMEKGTKVS 540
           GYVTPDDVPILLEQHI KGEI+  LWRGQMGLSE++Q K+QELR+QL+  TG  K TK +
Sbjct: 257 GYVTPDDVPILLEQHIEKGEIVYGLWRGQMGLSEEEQTKSQELRVQLNGGTGDGKPTKET 316

Query: 541 I--QTFEAGHPGNCNQVEVAGCCQGIANTICCQNSVSAXXXXXXXXXDRKEPLAAAGRNT 714
           +  QT E       +Q+EV  CCQ   N+ CCQN V +         +R+  +    + +
Sbjct: 317 LQTQTNEMDTAACGSQIEVMACCQENGNSSCCQNPVLS--GKMEKLFEREAKVTPEKKKS 374

Query: 715 SGKQINRTIKGRGACTRKVCAMPTWFESWEREDTY 819
           S   I+R+   + ACTRKVCAMPTWFESWEREDTY
Sbjct: 375 SKMTISRSSSNKSACTRKVCAMPTWFESWEREDTY 409


>emb|CAN64060.1| hypothetical protein VITISV_000012 [Vitis vinifera]
          Length = 464

 Score =  378 bits (971), Expect = e-102
 Identities = 185/275 (67%), Positives = 215/275 (78%), Gaps = 2/275 (0%)
 Frame = +1

Query: 1   ETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGEWHPGTPEALKGSYVFVCSHGSRD 180
           ETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGEW P TPE L GS +FVCSHGSRD
Sbjct: 169 ETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGEWQPVTPEKLIGSCIFVCSHGSRD 228

Query: 181 RRCGVCGPALVTRFSEEIDAHGLQGQVSVSPCSHIGGHKYAGNVIIFCRDVNGEVTGHWY 360
           RRCGVCGPA+V RF EEI++HGLQG+VSVSPCSHIGGHKYAGNVIIF  +++G+V+GHWY
Sbjct: 229 RRCGVCGPAVVARFKEEIESHGLQGKVSVSPCSHIGGHKYAGNVIIFGSNIDGKVSGHWY 288

Query: 361 GYVTPDDVPILLEQHIGKGEIIDQLWRGQMGLSEDDQKKAQELRLQLSSETGMEKGTKVS 540
           GYVTPDDVPILLEQHI KGEI+  LWRGQMGLSE++Q K+QELR+QL+  TG  K TK +
Sbjct: 289 GYVTPDDVPILLEQHIEKGEIVYGLWRGQMGLSEEEQTKSQELRVQLNGGTGDGKPTKET 348

Query: 541 I--QTFEAGHPGNCNQVEVAGCCQGIANTICCQNSVSAXXXXXXXXXDRKEPLAAAGRNT 714
           +  QT E       +Q+EV  CCQ   N+ CCQN V +         +R+  +    + +
Sbjct: 349 LQTQTNEMDTAACGSQIEVMACCQENGNSSCCQNPVLS--GKMEKLFEREAKVTPEKKKS 406

Query: 715 SGKQINRTIKGRGACTRKVCAMPTWFESWEREDTY 819
           S   I+R+   + ACTRKVCAMPTWFESWEREDTY
Sbjct: 407 SKMTISRSSSNKSACTRKVCAMPTWFESWEREDTY 441


>ref|XP_002522783.1| conserved hypothetical protein [Ricinus communis]
           gi|223538021|gb|EEF39634.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 446

 Score =  371 bits (952), Expect = e-100
 Identities = 178/275 (64%), Positives = 208/275 (75%), Gaps = 2/275 (0%)
 Frame = +1

Query: 1   ETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGEWHPGTPEALKGSYVFVCSHGSRD 180
           ETSNGDVLIFPDM RYRRLTHFDVDTFVEEVLVK+GEW PGTPE LKGSYVFVC HGSRD
Sbjct: 149 ETSNGDVLIFPDMTRYRRLTHFDVDTFVEEVLVKEGEWLPGTPETLKGSYVFVCCHGSRD 208

Query: 181 RRCGVCGPALVTRFSEEIDAHGLQGQVSVSPCSHIGGHKYAGNVIIFCRDVNGEVTGHWY 360
           RRCG+CGPA+V +F EEI+ HG QG+VSVSPCSHIGGHKYAGNVIIF   +NG +TGHWY
Sbjct: 209 RRCGLCGPAVVRKFKEEIELHGFQGKVSVSPCSHIGGHKYAGNVIIFGSSMNGLITGHWY 268

Query: 361 GYVTPDDVPILLEQHIGKGEIIDQLWRGQMGLSEDDQKKAQELRLQLSSETGMEKGTK-- 534
           GYVTPDDVPILL+QHI KGEI+DQLWRGQMGLSE++Q K+QELRLQL+ ET + +  K  
Sbjct: 269 GYVTPDDVPILLDQHIEKGEIVDQLWRGQMGLSEEEQIKSQELRLQLNGETDVTRNIKEL 328

Query: 535 VSIQTFEAGHPGNCNQVEVAGCCQGIANTICCQNSVSAXXXXXXXXXDRKEPLAAAGRNT 714
              Q  EA +    + VE   CCQ    + CCQ  VS          ++   ++   + +
Sbjct: 329 TQSQEDEASNAAIRSDVEFMACCQQNGKSSCCQYPVSKHKEENLDANNKGVKVSPEKKKS 388

Query: 715 SGKQINRTIKGRGACTRKVCAMPTWFESWEREDTY 819
           S + ++R   G+G  TR+VCAMPTW ESWEREDTY
Sbjct: 389 SKRLLSRINSGKGMSTRRVCAMPTWLESWEREDTY 423


>ref|XP_002298877.1| predicted protein [Populus trichocarpa] gi|222846135|gb|EEE83682.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score =  363 bits (931), Expect = 5e-98
 Identities = 176/274 (64%), Positives = 206/274 (75%), Gaps = 1/274 (0%)
 Frame = +1

Query: 1   ETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGEWHPGTPEALKGSYVFVCSHGSRD 180
           ETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGEW PGTPE LKGSYVFVCSHGSRD
Sbjct: 144 ETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGEWLPGTPEKLKGSYVFVCSHGSRD 203

Query: 181 RRCGVCGPALVTRFSEEIDAHGLQGQVSVSPCSHIGGHKYAGNVIIFCRDVNGEVTGHWY 360
           RRCGVCGPALV+RF EEI+ HGLQG+VSVSPCSHIGGHKYAGNVII      G VTGHWY
Sbjct: 204 RRCGVCGPALVSRFEEEIELHGLQGKVSVSPCSHIGGHKYAGNVIILGSSFKGAVTGHWY 263

Query: 361 GYVTPDDVPILLEQHIGKGEIIDQLWRGQMGLSEDDQKKAQELRLQLSSETGMEKGTKVS 540
           GYVTPDD+ ILLEQHIGKGEI+D+LWRGQMGLSE++Q K+ ELRLQ +  T  E   +++
Sbjct: 264 GYVTPDDIQILLEQHIGKGEIVDRLWRGQMGLSEEEQIKSHELRLQQNGGT-TENSKEIT 322

Query: 541 IQTFEAGHPGNC-NQVEVAGCCQGIANTICCQNSVSAXXXXXXXXXDRKEPLAAAGRNTS 717
            +  +  +  +  ++V   GCCQ   ++ CCQN V              +      ++ +
Sbjct: 323 QRPVDKSNTSSSRSEVVSTGCCQQNGSSSCCQNPVLPEKDVVDANERTAKVTPEKKKSNN 382

Query: 718 GKQINRTIKGRGACTRKVCAMPTWFESWEREDTY 819
            K ++R    +G+  RKVCAMPTWFESWER+DTY
Sbjct: 383 KKPLSRINSSKGSSARKVCAMPTWFESWERDDTY 416


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