BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025691
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001152105.1| ORF66a [Pinus koraiensis] gi|145048732|gb|AB...    61   1e-07

>ref|YP_001152105.1| ORF66a [Pinus koraiensis] gi|145048732|gb|ABP35351.1| ORF66a [Pinus
           koraiensis]
          Length = 66

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/49 (65%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
 Frame = -3

Query: 186 IERDVAQLGSAFVLGTKCHGFKSCHPYLLLLLCAV--MKDQLRSMKIEH 46
           I RDVAQLGS FVLGTKC  FKSCHPYL LL       KD L S++ EH
Sbjct: 2   IRRDVAQLGSVFVLGTKCRRFKSCHPYLSLLFYGKKGTKDHLISIRREH 50