BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025683
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323489.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containi...   141   5e-32
emb|CBI30210.3| unnamed protein product [Vitis vinifera]              141   5e-32
emb|CAN82063.1| hypothetical protein VITISV_016431 [Vitis vinifera]   139   3e-31
ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28

>ref|XP_002323489.1| predicted protein [Populus trichocarpa] gi|222868119|gb|EEF05250.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score =  150 bits (378), Expect = 1e-34
 Identities = 77/146 (52%), Positives = 107/146 (73%)
 Frame = +2

Query: 17  NFISPNKVVDATTISDNNFHHLLRLSIRNEDILIAKAVHASVLKVEENAHVLNILISTYI 196
           N+ SP    D     D+ F+ LLRLS++  DI +A+A+HAS+LK+ E+ H+ N +I+ YI
Sbjct: 90  NYHSPQTNTDCLIEVDDLFN-LLRLSVKYTDIDLARALHASILKLGEDTHLGNAVIAAYI 148

Query: 197 KLWNFNYAYNSFSKLPCPDVVSYTTLMSAYAKCGRENEAIGLFFKMRLSGIKPNEYTFVA 376
           KL     AY  F  +  PDVVSY+ L+S+++K  RE EAI LFF+MR+SGI+PNEY+FVA
Sbjct: 149 KLGLVVDAYEVFMGMSTPDVVSYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSFVA 208

Query: 377 ILSACVRVLDLRLGLQIHALVVKLGY 454
           IL+AC+R L+L +GLQ+HAL +KLGY
Sbjct: 209 ILTACIRSLELEMGLQVHALAIKLGY 234



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/92 (28%), Positives = 52/92 (56%)
 Frame = +2

Query: 179 LISTYIKLWNFNYAYNSFSKLPCPDVVSYTTLMSAYAKCGRENEAIGLFFKMRLSGIKPN 358
           +I+ Y++    + A + F+K+P  + VSY  L++ + K     +A+ LF +M   G +  
Sbjct: 377 MITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELT 436

Query: 359 EYTFVAILSACVRVLDLRLGLQIHALVVKLGY 454
           ++T   +++AC  +L L +  QIH  ++K G+
Sbjct: 437 DFTLTGVINACGLLLKLEISRQIHGFIIKFGF 468



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/134 (27%), Positives = 71/134 (52%), Gaps = 3/134 (2%)
 Frame = +2

Query: 59  SDNNFHHLLRLSIRNEDILIAKAVHASVLKV--EENAHVLNILISTYIKLWNFNYAYNSF 232
           ++ +F  +L   IR+ ++ +   VHA  +K+   +   V N LI  Y K    ++A + F
Sbjct: 202 NEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLF 261

Query: 233 SKLPCPDVVSYTTLMSAYAKCGRENEAIGLFFKMRLS-GIKPNEYTFVAILSACVRVLDL 409
            ++P  D+ S+ T++S+  K     +A+ LF  +  + G K +++T   +L+AC R    
Sbjct: 262 DEMPQRDIASWNTMISSLVKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTACARCHAR 321

Query: 410 RLGLQIHALVVKLG 451
             G +IHA  +++G
Sbjct: 322 IQGREIHAYAIRIG 335



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
 Frame = +2

Query: 116 IAKAVHASVLKVEENAH--VLNILISTYIKLWNFNYAYNSFSKLPCPDVVSYTTLMSAYA 289
           + K +H   LK   +A   V N +IS Y K +N + A  +F+ +P  DVVS+  L++   
Sbjct: 559 VGKQIHCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQL 618

Query: 290 KCGRENEAIGLFFKMRLSGIKPNEYTFVAILSA 388
              + +EA+ ++  M  +GIKP+  TFV I+SA
Sbjct: 619 LHRQGDEALAIWSSMEKAGIKPDAITFVLIVSA 651


>ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score =  141 bits (356), Expect = 5e-32
 Identities = 66/130 (50%), Positives = 97/130 (74%)
 Frame = +2

Query: 65  NNFHHLLRLSIRNEDILIAKAVHASVLKVEENAHVLNILISTYIKLWNFNYAYNSFSKLP 244
           N+ ++LL LS+R +D+ + KAVHAS+ K+ E+ H+ N LI  Y+KL     AY  F  L 
Sbjct: 73  NDHYYLLDLSVRYDDVELIKAVHASIFKLAEDIHLANALIVAYLKLGMVPNAYKVFVGLS 132

Query: 245 CPDVVSYTTLMSAYAKCGRENEAIGLFFKMRLSGIKPNEYTFVAILSACVRVLDLRLGLQ 424
           CP+VVSYT ++S +AK  RE +A+ +FF+MR SGI+ NE++FVAIL+ C+R+LDL LG Q
Sbjct: 133 CPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQ 192

Query: 425 IHALVVKLGY 454
           +HA+V+K+G+
Sbjct: 193 LHAIVIKMGF 202



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/147 (22%), Positives = 67/147 (45%), Gaps = 33/147 (22%)
 Frame = +2

Query: 113 LIAKAVHASVLKV--EENAHVLNILISTYIKLWNFNY----------------------- 217
           ++ + +HA V+K+  E N  V+N LI  Y K  +  +                       
Sbjct: 289 MVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAY 348

Query: 218 --------AYNSFSKLPCPDVVSYTTLMSAYAKCGRENEAIGLFFKMRLSGIKPNEYTFV 373
                   A   F K+P  + +SY  ++S + + G  ++A+  F +M   G++  ++T  
Sbjct: 349 MEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLT 408

Query: 374 AILSACVRVLDLRLGLQIHALVVKLGY 454
            +L+AC  +++ ++  QIH  ++K G+
Sbjct: 409 GVLNACGLLMEAKISKQIHGFILKFGF 435


>emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  141 bits (356), Expect = 5e-32
 Identities = 66/130 (50%), Positives = 97/130 (74%)
 Frame = +2

Query: 65  NNFHHLLRLSIRNEDILIAKAVHASVLKVEENAHVLNILISTYIKLWNFNYAYNSFSKLP 244
           N+ ++LL LS+R +D+ + KAVHAS+ K+ E+ H+ N LI  Y+KL     AY  F  L 
Sbjct: 91  NDHYYLLDLSVRYDDVELIKAVHASIFKLAEDIHLANALIVAYLKLGMVPNAYKVFVGLS 150

Query: 245 CPDVVSYTTLMSAYAKCGRENEAIGLFFKMRLSGIKPNEYTFVAILSACVRVLDLRLGLQ 424
           CP+VVSYT ++S +AK  RE +A+ +FF+MR SGI+ NE++FVAIL+ C+R+LDL LG Q
Sbjct: 151 CPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQ 210

Query: 425 IHALVVKLGY 454
           +HA+V+K+G+
Sbjct: 211 LHAIVIKMGF 220



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/147 (22%), Positives = 67/147 (45%), Gaps = 33/147 (22%)
 Frame = +2

Query: 113 LIAKAVHASVLKV--EENAHVLNILISTYIKLWNFNY----------------------- 217
           ++ + +HA V+K+  E N  V+N LI  Y K  +  +                       
Sbjct: 307 MVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAY 366

Query: 218 --------AYNSFSKLPCPDVVSYTTLMSAYAKCGRENEAIGLFFKMRLSGIKPNEYTFV 373
                   A   F K+P  + +SY  ++S + + G  ++A+  F +M   G++  ++T  
Sbjct: 367 MEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLT 426

Query: 374 AILSACVRVLDLRLGLQIHALVVKLGY 454
            +L+AC  +++ ++  QIH  ++K G+
Sbjct: 427 GVLNACGLLMEAKISKQIHGFILKFGF 453


>emb|CAN82063.1| hypothetical protein VITISV_016431 [Vitis vinifera]
          Length = 755

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/130 (50%), Positives = 96/130 (73%)
 Frame = +2

Query: 65  NNFHHLLRLSIRNEDILIAKAVHASVLKVEENAHVLNILISTYIKLWNFNYAYNSFSKLP 244
           N+ ++LL LS+R +D+ + KAVHAS+ K+ E+ H+ N LI  Y+KL     A   F  L 
Sbjct: 75  NDHYYLLDLSVRYDDVELIKAVHASIFKLAEDIHLANALIVAYLKLGMVXNAXKVFVGLS 134

Query: 245 CPDVVSYTTLMSAYAKCGRENEAIGLFFKMRLSGIKPNEYTFVAILSACVRVLDLRLGLQ 424
           CP+VVSYT ++S +AK  RE +A+ +FF+MR SGI+ NE++FVAIL+ C+R+LDL LG Q
Sbjct: 135 CPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQ 194

Query: 425 IHALVVKLGY 454
           +HA+V+K+G+
Sbjct: 195 LHAIVIKMGF 204



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 23/91 (25%), Positives = 51/91 (56%)
 Frame = +2

Query: 182 ISTYIKLWNFNYAYNSFSKLPCPDVVSYTTLMSAYAKCGRENEAIGLFFKMRLSGIKPNE 361
           +ST +     + A   F K+P  + +SY  ++S + + G  ++A+  F +M   G++  +
Sbjct: 278 LSTILVAAMEDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTD 337

Query: 362 YTFVAILSACVRVLDLRLGLQIHALVVKLGY 454
           +T   +L+AC  +++ ++  QIH  ++K G+
Sbjct: 338 FTXTGVLNACGLLMEAKISKQIHGFILKFGF 368


>ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  130 bits (326), Expect = 1e-28
 Identities = 70/124 (56%), Positives = 89/124 (71%)
 Frame = +2

Query: 80  LLRLSIRNEDILIAKAVHASVLKVEENAHVLNILISTYIKLWNFNYAYNSFSKLPCPDVV 259
           LLRLS R  D  +A+AVHA  LK+EE+  + N LIS Y+KL     A   FS L CP+VV
Sbjct: 103 LLRLSTRYGDPDLARAVHAQFLKLEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVV 162

Query: 260 SYTTLMSAYAKCGRENEAIGLFFKMRLSGIKPNEYTFVAILSACVRVLDLRLGLQIHALV 439
           SYT L+S ++K   E+EA+ LFF M  SGI+PNEYTFVAIL+AC+R +D +LG Q+H +V
Sbjct: 163 SYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIV 222

Query: 440 VKLG 451
           VKLG
Sbjct: 223 VKLG 226



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
 Frame = +2

Query: 59  SDNNFHHLLRLSIRNEDILIAKAVHASVLKVE--ENAHVLNILISTYIKLWNFNYAYNSF 232
           ++  F  +L   IRN D  +   VH  V+K+       + N L+  Y K    +     F
Sbjct: 195 NEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLF 254

Query: 233 SKLPCPDVVSYTTLMSAYAKCGRENEAIGLFFKMRL-SGIKPNEYTFVAILSACVRVLDL 409
            ++P  D+ S+ T++S+  K  + +EA   F  M+L  G+K + ++   +L+AC   +  
Sbjct: 255 EEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKP 314

Query: 410 RLGLQIHALVVKLG 451
             G Q+HAL +K+G
Sbjct: 315 MKGQQLHALALKVG 328