BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025682
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsi...    83   2e-14
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...    78   7e-13
dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]                 73   2e-11
ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulga...    73   2e-11
emb|CAA16968.1| hypothetical protein [Arabidopsis thaliana] gi|7...    70   1e-10

>gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 889

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/82 (48%), Positives = 58/82 (70%)
 Frame = -3

Query: 259 ASNNEAEYEAAICALRTALKLGARKLQLLTDSRLVANQFDGSFEARDERMAAYLSLIHSL 80
           ASNNE+EYEA I  ++ A + G R++   +DS+LV +QF G +EA+DERM AYL L+ +L
Sbjct: 680 ASNNESEYEALIAGIKLAQEKGIREIHAYSDSQLVTSQFHGEYEAKDERMEAYLELVKTL 739

Query: 79  A*QFDSISITQRPRNDIRHAET 14
           A QF+S  +T+ PR +   A+T
Sbjct: 740 AQQFESFKLTRIPRGENTSADT 761


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/76 (50%), Positives = 54/76 (71%)
 Frame = -3

Query: 259  ASNNEAEYEAAICALRTALKLGARKLQLLTDSRLVANQFDGSFEARDERMAAYLSLIHSL 80
            ASNNEAEYEA I  LR A  +  +K+Q   DS+LVA+QF G++EA++ERM AYL ++  L
Sbjct: 1192 ASNNEAEYEALIAGLRLAHGIEVKKIQAYCDSQLVASQFSGNYEAKNERMDAYLKVVREL 1251

Query: 79   A*QFDSISITQRPRND 32
            +  F+   +T+ PR+D
Sbjct: 1252 SYNFEVFELTKIPRSD 1267


>dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]
          Length = 764

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/81 (46%), Positives = 52/81 (64%)
 Frame = -3

Query: 259 ASNNEAEYEAAICALRTALKLGARKLQLLTDSRLVANQFDGSFEARDERMAAYLSLIHSL 80
           ASNNEAEYEAAI  ++  +   A+K++L TDS+LVA+Q  G +EAR+  M  YL +I  L
Sbjct: 232 ASNNEAEYEAAIAGIKMCMAADAKKIRLQTDSQLVASQIRGEYEAREPAMQKYLQMIKDL 291

Query: 79  A*QFDSISITQRPRNDIRHAE 17
           A Q  S+ +   PR D   A+
Sbjct: 292 AAQLISLEVVLVPRADNSQAD 312


>ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435157|ref|YP_004222375.1| hypothetical protein
           BevumaM_p142 [Beta vulgaris subsp. maritima]
           gi|346683249|ref|YP_004842181.1| hypothetical protein
           BemaM_p137 [Beta macrocarpa] gi|9049300|dbj|BAA99310.1|
           orf764 [Beta vulgaris subsp. vulgaris]
           gi|317905608|emb|CBJ14014.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439890|emb|CBJ17590.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148045|emb|CBJ20708.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500167|emb|CBX24986.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977907|emb|CBL54131.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 764

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/81 (46%), Positives = 52/81 (64%)
 Frame = -3

Query: 259 ASNNEAEYEAAICALRTALKLGARKLQLLTDSRLVANQFDGSFEARDERMAAYLSLIHSL 80
           ASNNEAEYEAAI  ++  +   A+K++L TDS+LVA+Q  G +EAR+  M  YL +I  L
Sbjct: 232 ASNNEAEYEAAIAGIKMCMAADAKKIRLQTDSQLVASQIRGEYEAREPAMQKYLQMIKDL 291

Query: 79  A*QFDSISITQRPRNDIRHAE 17
           A Q  S+ +   PR D   A+
Sbjct: 292 AAQLISLEVVLVPRADNSQAD 312


>emb|CAA16968.1| hypothetical protein [Arabidopsis thaliana]
           gi|7270126|emb|CAB79940.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 452

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/58 (55%), Positives = 46/58 (79%)
 Frame = -3

Query: 259 ASNNEAEYEAAICALRTALKLGARKLQLLTDSRLVANQFDGSFEARDERMAAYLSLIH 86
           ASNNEAEYEA +  LR A  LGA++++  +DS+LV ++F G FEA++ERM A+LS++H
Sbjct: 246 ASNNEAEYEALLAGLRLAKGLGAKQIKAFSDSQLVVSRFSGEFEAKNERMRAHLSMVH 303