BLASTX nr result

ID: Coptis24_contig00025669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025669
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270295.2| PREDICTED: receptor-like serine/threonine-pr...   130   1e-28
emb|CBI25711.3| unnamed protein product [Vitis vinifera]              130   1e-28
emb|CAN77364.1| hypothetical protein VITISV_005348 [Vitis vinifera]   130   1e-28
ref|XP_003532566.1| PREDICTED: receptor-like serine/threonine-pr...   124   6e-27
ref|XP_003608281.1| Serine/threonine protein kinase [Medicago tr...   124   6e-27

>ref|XP_002270295.2| PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like
            [Vitis vinifera]
          Length = 866

 Score =  130 bits (327), Expect = 1e-28
 Identities = 64/103 (62%), Positives = 80/103 (77%), Gaps = 1/103 (0%)
 Frame = -1

Query: 505  AWNLWKDGKGLELRDESMSDTSSPYEVLKCIQIALLCVQEHAEDRPTISSVLLMLGSETP 326
            AW LW++GKGLEL D S+S++ +PY+VL+CIQ+ LLCVQEHAEDRP +SSV+LML SET 
Sbjct: 764  AWRLWREGKGLELMDSSVSESCAPYDVLRCIQVGLLCVQEHAEDRPVMSSVVLMLSSETA 823

Query: 325  VLAQPKEPGFSLGRTPNGAHSSSIDQ-ETCSVNQVTITMLEAR 200
             L  PK PGF LGR      SSS  Q ET +VNQVT+T+++AR
Sbjct: 824  TLPLPKNPGFCLGRKLVETDSSSSKQEETFTVNQVTVTVMDAR 866


>emb|CBI25711.3| unnamed protein product [Vitis vinifera]
          Length = 619

 Score =  130 bits (327), Expect = 1e-28
 Identities = 64/103 (62%), Positives = 80/103 (77%), Gaps = 1/103 (0%)
 Frame = -1

Query: 505 AWNLWKDGKGLELRDESMSDTSSPYEVLKCIQIALLCVQEHAEDRPTISSVLLMLGSETP 326
           AW LW++GKGLEL D S+S++ +PY+VL+CIQ+ LLCVQEHAEDRP +SSV+LML SET 
Sbjct: 517 AWRLWREGKGLELMDSSVSESCAPYDVLRCIQVGLLCVQEHAEDRPVMSSVVLMLSSETA 576

Query: 325 VLAQPKEPGFSLGRTPNGAHSSSIDQ-ETCSVNQVTITMLEAR 200
            L  PK PGF LGR      SSS  Q ET +VNQVT+T+++AR
Sbjct: 577 TLPLPKNPGFCLGRKLVETDSSSSKQEETFTVNQVTVTVMDAR 619


>emb|CAN77364.1| hypothetical protein VITISV_005348 [Vitis vinifera]
          Length = 145

 Score =  130 bits (327), Expect = 1e-28
 Identities = 64/103 (62%), Positives = 80/103 (77%), Gaps = 1/103 (0%)
 Frame = -1

Query: 505 AWNLWKDGKGLELRDESMSDTSSPYEVLKCIQIALLCVQEHAEDRPTISSVLLMLGSETP 326
           AW LW++GKGLEL D S+S++ +PY+VL+CIQ+ LLCVQEHAEDRP +SSV+LML SET 
Sbjct: 43  AWRLWREGKGLELMDSSVSESCAPYDVLRCIQVGLLCVQEHAEDRPVMSSVVLMLSSETA 102

Query: 325 VLAQPKEPGFSLGRTPNGAHSSSIDQ-ETCSVNQVTITMLEAR 200
            L  PK PGF LGR      SSS  Q ET +VNQVT+T+++AR
Sbjct: 103 TLPLPKNPGFCLGRKLVETDSSSSKQEETFTVNQVTVTVMDAR 145


>ref|XP_003532566.1| PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like
            [Glycine max]
          Length = 1062

 Score =  124 bits (312), Expect = 6e-27
 Identities = 62/103 (60%), Positives = 78/103 (75%), Gaps = 1/103 (0%)
 Frame = -1

Query: 505  AWNLWKDGKGLELRDESMSDTSSPYEVLKCIQIALLCVQEHAEDRPTISSVLLMLGSETP 326
            AW LWK+   LEL D S+ ++ S  EVL+CIQ+ LLCVQE AEDRPT++SV+LML S+T 
Sbjct: 960  AWKLWKEENALELIDPSIDNSYSESEVLRCIQVGLLCVQERAEDRPTMASVVLMLSSDTA 1019

Query: 325  VLAQPKEPGFSLGRTPNGAHSSSIDQ-ETCSVNQVTITMLEAR 200
             ++QPK PGF LGR P    SSS  Q E+C+VNQVT+TML+AR
Sbjct: 1020 SMSQPKNPGFCLGRNPMETDSSSSKQEESCTVNQVTVTMLDAR 1062


>ref|XP_003608281.1| Serine/threonine protein kinase [Medicago truncatula]
            gi|355509336|gb|AES90478.1| Serine/threonine protein
            kinase [Medicago truncatula]
          Length = 852

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/103 (59%), Positives = 76/103 (73%), Gaps = 1/103 (0%)
 Frame = -1

Query: 505  AWNLWKDGKGLELRDESMSDTSSPYEVLKCIQIALLCVQEHAEDRPTISSVLLMLGSETP 326
            +W LW +G  LEL D S+ ++ SP EV +CIQ+ LLCVQE AEDRPT+SSV+LML SET 
Sbjct: 750  SWKLWNEGNALELIDSSIVNSYSPAEVFRCIQVGLLCVQERAEDRPTMSSVVLMLSSETA 809

Query: 325  VLAQPKEPGFSLGRTPNGAHSSSIDQ-ETCSVNQVTITMLEAR 200
             +AQPK PGF LG  P    SSS  Q E+C+VNQVT+TM++ R
Sbjct: 810  TIAQPKNPGFCLGSNPVETDSSSSKQDESCTVNQVTVTMVDGR 852


Top