BLASTX nr result

ID: Coptis24_contig00025660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025660
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327356.1| predicted protein [Populus trichocarpa] gi|2...   255   3e-66
ref|XP_002521817.1| synaptotagmin, putative [Ricinus communis] g...   249   1e-64
ref|XP_002325538.1| predicted protein [Populus trichocarpa] gi|2...   245   2e-63
gb|AAC25524.1| Strong similarity to phosphoribosylanthranilate t...   242   3e-62
ref|NP_173675.1| C2 domain-containing protein [Arabidopsis thali...   242   3e-62

>ref|XP_002327356.1| predicted protein [Populus trichocarpa] gi|222835726|gb|EEE74161.1|
           predicted protein [Populus trichocarpa]
          Length = 774

 Score =  255 bits (651), Expect = 3e-66
 Identities = 120/163 (73%), Positives = 142/163 (87%), Gaps = 1/163 (0%)
 Frame = -3

Query: 488 FDMSEVPLRVPPDSPLAAQWYRLEEKNGEKTKGEIMLAVWMGTQADESFPEAWHSDAHSI 309
           FD+SEVPLRVPPDSPLA QWY LE+K G KT+GEIMLAVWMGTQADESFPEAWHSDAH I
Sbjct: 125 FDLSEVPLRVPPDSPLAPQWYILEDKKGVKTRGEIMLAVWMGTQADESFPEAWHSDAHDI 184

Query: 308 SQESLSNTRSKVYFSPRLFYLRMHVIEAQDLVPSD-GSRADIYVKIQLGNQLRITQPPTI 132
           S  +LSNTRSKVYFSP+L+YLR+HVIEAQDLVPSD G   D+YVK+QLGNQLR+T+P  +
Sbjct: 185 SHTNLSNTRSKVYFSPKLYYLRVHVIEAQDLVPSDRGRMPDVYVKVQLGNQLRVTKPSEM 244

Query: 131 RSVNPRWDDELMFVVPEPMDEFIIITVEDRVGPNKNEILGRLI 3
           R++NP W+DEL+ V  EP ++FII++VEDR+G  K EILGR+I
Sbjct: 245 RTINPIWNDELILVASEPFEDFIIVSVEDRIGQGKVEILGRVI 287


>ref|XP_002521817.1| synaptotagmin, putative [Ricinus communis]
           gi|223539030|gb|EEF40627.1| synaptotagmin, putative
           [Ricinus communis]
          Length = 1032

 Score =  249 bits (637), Expect = 1e-64
 Identities = 116/163 (71%), Positives = 144/163 (88%), Gaps = 1/163 (0%)
 Frame = -3

Query: 488 FDMSEVPLRVPPDSPLAAQWYRLEEKNGEKTKGEIMLAVWMGTQADESFPEAWHSDAHSI 309
           FD+SEVPLRVPPDSPLA QWY+LE+K G+KTKGEIMLAVWMGTQADESFPEAWH+DAH I
Sbjct: 386 FDLSEVPLRVPPDSPLAPQWYKLEDKKGDKTKGEIMLAVWMGTQADESFPEAWHNDAHDI 445

Query: 308 SQESLSNTRSKVYFSPRLFYLRMHVIEAQDLVPSDGSRA-DIYVKIQLGNQLRITQPPTI 132
              +L++TRSKVYFSP+L+YLR+HV+EAQDL PS+  RA D+YVK+QLGNQ R+T+P   
Sbjct: 446 GHTNLADTRSKVYFSPKLYYLRVHVMEAQDLFPSEKGRAPDVYVKVQLGNQGRVTRP--A 503

Query: 131 RSVNPRWDDELMFVVPEPMDEFIIITVEDRVGPNKNEILGRLI 3
           RS+NP W++ELMFV  EP +++II++VEDRVGP K+EI+GR+I
Sbjct: 504 RSINPGWNEELMFVASEPFEDYIIVSVEDRVGPGKDEIMGRVI 546


>ref|XP_002325538.1| predicted protein [Populus trichocarpa] gi|222862413|gb|EEE99919.1|
           predicted protein [Populus trichocarpa]
          Length = 754

 Score =  245 bits (626), Expect = 2e-63
 Identities = 115/163 (70%), Positives = 140/163 (85%), Gaps = 1/163 (0%)
 Frame = -3

Query: 488 FDMSEVPLRVPPDSPLAAQWYRLEEKNGEKTKGEIMLAVWMGTQADESFPEAWHSDAHSI 309
           FD+SEVPLRVPPDSPLA QWYRLE+K   KT+GEIMLAVWMGTQADESFPEAWHSDAH I
Sbjct: 104 FDLSEVPLRVPPDSPLAPQWYRLEDKRRIKTRGEIMLAVWMGTQADESFPEAWHSDAHDI 163

Query: 308 SQESLSNTRSKVYFSPRLFYLRMHVIEAQDLVPSD-GSRADIYVKIQLGNQLRITQPPTI 132
           S  +L+NTRSKVYFSP+L+YLR+ +IEAQDL+PSD G   ++ VK+QLGNQ R+T+    
Sbjct: 164 SHTNLANTRSKVYFSPKLYYLRVQIIEAQDLIPSDKGRMLEVSVKVQLGNQGRVTRSLQT 223

Query: 131 RSVNPRWDDELMFVVPEPMDEFIIITVEDRVGPNKNEILGRLI 3
           R++NP W+DELMFV  EP ++FII++VEDR+GP K+EILGR+I
Sbjct: 224 RTINPIWNDELMFVASEPFEDFIIVSVEDRIGPGKDEILGRVI 266


>gb|AAC25524.1| Strong similarity to phosphoribosylanthranilate transferase
           gb|D86180 from Pisum sativum. This ORF may be part of a
           larger gene that lies in the overlapping region
           [Arabidopsis thaliana]
          Length = 783

 Score =  242 bits (617), Expect = 3e-62
 Identities = 113/162 (69%), Positives = 140/162 (86%), Gaps = 2/162 (1%)
 Frame = -3

Query: 485 DMSEVPLRVPPDSPLAAQWYRLEEKNGEKT-KGEIMLAVWMGTQADESFPEAWHSDAHSI 309
           D++EVPLRVPPDSPLA QWYRLE+K G KT +GEIMLAVWMGTQADESFP+AWHSDAH +
Sbjct: 133 DLTEVPLRVPPDSPLAPQWYRLEDKKGMKTNRGEIMLAVWMGTQADESFPDAWHSDAHRV 192

Query: 308 SQESLSNTRSKVYFSPRLFYLRMHVIEAQDLVPSDGSRA-DIYVKIQLGNQLRITQPPTI 132
           S  +LSNTRSKVYFSP+L+YLR+HV+EAQDLVPSD  R  D  VKIQ GNQ+R T+ P +
Sbjct: 193 SHSNLSNTRSKVYFSPKLYYLRIHVMEAQDLVPSDKGRVPDAIVKIQAGNQMRATRTPQM 252

Query: 131 RSVNPRWDDELMFVVPEPMDEFIIITVEDRVGPNKNEILGRL 6
           R++NP+W +ELMFVV EP ++ +I++V+DR+GP K+EILGR+
Sbjct: 253 RTMNPQWHEELMFVVSEPFEDMVIVSVDDRIGPGKDEILGRV 294


>ref|NP_173675.1| C2 domain-containing protein [Arabidopsis thaliana]
           gi|6587829|gb|AAF18518.1|AC006551_4 Highly similar to
           phosphoribosylanthranilate transferase [Arabidopsis
           thaliana] gi|332192139|gb|AEE30260.1| C2
           domain-containing protein [Arabidopsis thaliana]
          Length = 1029

 Score =  242 bits (617), Expect = 3e-62
 Identities = 113/162 (69%), Positives = 140/162 (86%), Gaps = 2/162 (1%)
 Frame = -3

Query: 485 DMSEVPLRVPPDSPLAAQWYRLEEKNGEKT-KGEIMLAVWMGTQADESFPEAWHSDAHSI 309
           D++EVPLRVPPDSPLA QWYRLE+K G KT +GEIMLAVWMGTQADESFP+AWHSDAH +
Sbjct: 379 DLTEVPLRVPPDSPLAPQWYRLEDKKGMKTNRGEIMLAVWMGTQADESFPDAWHSDAHRV 438

Query: 308 SQESLSNTRSKVYFSPRLFYLRMHVIEAQDLVPSDGSRA-DIYVKIQLGNQLRITQPPTI 132
           S  +LSNTRSKVYFSP+L+YLR+HV+EAQDLVPSD  R  D  VKIQ GNQ+R T+ P +
Sbjct: 439 SHSNLSNTRSKVYFSPKLYYLRIHVMEAQDLVPSDKGRVPDAIVKIQAGNQMRATRTPQM 498

Query: 131 RSVNPRWDDELMFVVPEPMDEFIIITVEDRVGPNKNEILGRL 6
           R++NP+W +ELMFVV EP ++ +I++V+DR+GP K+EILGR+
Sbjct: 499 RTMNPQWHEELMFVVSEPFEDMVIVSVDDRIGPGKDEILGRV 540


Top