BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025657
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284303.2| PREDICTED: uncharacterized rhomboid protein ...   191   1e-46
ref|XP_003527920.1| PREDICTED: inactive rhomboid protein 1-like ...   166   5e-39
emb|CAN76609.1| hypothetical protein VITISV_039487 [Vitis vinifera]   166   5e-39
ref|XP_003522595.1| PREDICTED: inactive rhomboid protein 1-like ...   163   3e-38
dbj|BAK20219.1| Rhomboid family KOMPEITO [Arabidopsis thaliana]       162   7e-38

>ref|XP_002284303.2| PREDICTED: uncharacterized rhomboid protein AN10929-like [Vitis
           vinifera]
          Length = 379

 Score =  191 bits (486), Expect = 1e-46
 Identities = 91/199 (45%), Positives = 123/199 (61%)
 Frame = +1

Query: 1   VYSDKPSALVTLFFLVMVNFSVGFLPHVDNFSNMGGFVSGILLGLVLFFTPQLGEVPEHK 180
           VY+DK +AL  L  + ++NF++G LP+VDNFSN+GGF+SG+LLG VL F+P+L  + E K
Sbjct: 204 VYTDKLAALSALLLVAVINFALGLLPYVDNFSNLGGFISGVLLGFVLLFSPRLPRMAEKK 263

Query: 181 RGLFEYNRKSSIEFKLKLDKPVTRSISXXXXXXXXAGGLTAVLHGVNANNYCSWCHHIDC 360
            G F+Y+ K SI  K KLD+PV RS+S        AG + AVLHG++ N YCSWC +I+C
Sbjct: 264 GGFFDYSVKKSIRLKQKLDRPVLRSVSFVLFGLVLAGAIVAVLHGIDMNKYCSWCQYINC 323

Query: 361 VTSKRWTCNXXXXXXXXXXXXXXXXXXXXXXXXKEISCQVTVSAGRLTVTCKRNDKYRMY 540
           V S RW+CN                        K  +CQ   +AGRLTVTC   D +R++
Sbjct: 324 VPSNRWSCN-----------------------TKVTACQTMENAGRLTVTCMGKDNFRVF 360

Query: 541 PYADISKARIGDLCSQICS 597
           P+   S+ R+ DLC  ICS
Sbjct: 361 PFTSFSETRLHDLCDLICS 379


>ref|XP_003527920.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
          Length = 373

 Score =  166 bits (420), Expect = 5e-39
 Identities = 84/199 (42%), Positives = 118/199 (59%), Gaps = 2/199 (1%)
 Frame = +1

Query: 4   YSDKPSALVTLFFLVMVNFSVGFLPHVDNFSNMGGFVSGILLGLVLFFTPQLGEVPEHKR 183
           +S+K SA+ +L F+ + NF +GFLP+VDNF+++GGF+SG LLG V   +PQL  V  +K 
Sbjct: 198 HSNKISAIASLVFVFVCNFVLGFLPYVDNFASIGGFISGFLLGSVFLLSPQLQPVAPNKG 257

Query: 184 GLFEYNRKSSIEFKL--KLDKPVTRSISXXXXXXXXAGGLTAVLHGVNANNYCSWCHHID 357
           GL +Y  KS I+ KL  KLD+PV R +S        AG L AVLHG+N N+YC+WC ++D
Sbjct: 258 GLIDYGVKSCIKLKLKQKLDRPVLRIVSLILFSLLLAGCLVAVLHGININSYCTWCPYVD 317

Query: 358 CVTSKRWTCNXXXXXXXXXXXXXXXXXXXXXXXXKEISCQVTVSAGRLTVTCKRNDKYRM 537
           C+    W C                          E SC+  VS  +LT+TC  N  +R+
Sbjct: 318 CIPFTSWHCK-----------------------DTETSCETMVSNAQLTMTCIGNGNFRV 354

Query: 538 YPYADISKARIGDLCSQIC 594
           +P+ +IS+AR  DLC+ IC
Sbjct: 355 FPFTNISRARFNDLCNLIC 373


>emb|CAN76609.1| hypothetical protein VITISV_039487 [Vitis vinifera]
          Length = 448

 Score =  166 bits (420), Expect = 5e-39
 Identities = 81/180 (45%), Positives = 107/180 (59%)
 Frame = +1

Query: 1   VYSDKPSALVTLFFLVMVNFSVGFLPHVDNFSNMGGFVSGILLGLVLFFTPQLGEVPEHK 180
           VY+DK +AL  L  + ++NF++G LP+VDNFSN+GGF+SG+LLG VL F+P+L  + E K
Sbjct: 187 VYTDKLAALSALLLVAVINFALGLLPYVDNFSNLGGFISGVLLGFVLLFSPRLPRMXEKK 246

Query: 181 RGLFEYNRKSSIEFKLKLDKPVTRSISXXXXXXXXAGGLTAVLHGVNANNYCSWCHHIDC 360
            G F+Y  K S     KLD+PV RS+S        AG + AVLHG++ N YCSWC +I+C
Sbjct: 247 GGFFDYXVKKSXRLXQKLDRPVLRSVSFVLFGLVLAGAIVAVLHGIDMNKYCSWCQYINC 306

Query: 361 VTSKRWTCNXXXXXXXXXXXXXXXXXXXXXXXXKEISCQVTVSAGRLTVTCKRNDKYRMY 540
           V S RW+CN                        K  +CQ   +AGRLTVTC   D +R Y
Sbjct: 307 VPSNRWSCN-----------------------TKVTACQTMENAGRLTVTCMGKDNFRHY 343


>ref|XP_003522595.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
          Length = 368

 Score =  163 bits (413), Expect = 3e-38
 Identities = 82/199 (41%), Positives = 117/199 (58%), Gaps = 2/199 (1%)
 Frame = +1

Query: 4   YSDKPSALVTLFFLVMVNFSVGFLPHVDNFSNMGGFVSGILLGLVLFFTPQLGEVPEHKR 183
           +S+K SA+ +L F+ + NF +GFLP+VDNF++MGGF+SG LLG V    PQ+  V  +K 
Sbjct: 193 HSNKISAIASLVFVFVCNFVLGFLPYVDNFASMGGFISGFLLGSVFLLCPQIQPVAPNKG 252

Query: 184 GLFEYNRKSSIEFKL--KLDKPVTRSISXXXXXXXXAGGLTAVLHGVNANNYCSWCHHID 357
           GL +Y  KS ++ KL  KLD+PV R +S        AG L AVLHG+N ++YC+WC ++D
Sbjct: 253 GLIDYGVKSYVKLKLKEKLDRPVLRIVSLILFSLLLAGCLVAVLHGINISSYCTWCPYVD 312

Query: 358 CVTSKRWTCNXXXXXXXXXXXXXXXXXXXXXXXXKEISCQVTVSAGRLTVTCKRNDKYRM 537
           C+    W C                          E SC+  VS  +LT+TC  N  +R+
Sbjct: 313 CIPFTSWHCK-----------------------DTETSCETMVSNAQLTMTCIGNGNFRV 349

Query: 538 YPYADISKARIGDLCSQIC 594
           +P+ +IS+AR  DLC+ IC
Sbjct: 350 FPFTNISRARFNDLCNLIC 368


>dbj|BAK20219.1| Rhomboid family KOMPEITO [Arabidopsis thaliana]
          Length = 385

 Score =  162 bits (410), Expect = 7e-38
 Identities = 82/200 (41%), Positives = 114/200 (57%), Gaps = 1/200 (0%)
 Frame = +1

Query: 1   VYSDKPSALVTLFFLVMVNFSVGFLPHVDNFSNMGGFVSGILLGLVLFFTPQLGEV-PEH 177
           +Y+ K SAL  +F +  VNF +GFLP +DNF+N+GGF+SG LLG VL F PQL ++ P H
Sbjct: 209 LYNSKISALAIIFTIFTVNFLIGFLPFIDNFANIGGFISGFLLGFVLLFKPQLRQMPPSH 268

Query: 178 KRGLFEYNRKSSIEFKLKLDKPVTRSISXXXXXXXXAGGLTAVLHGVNANNYCSWCHHID 357
           K  LFE +   S   K + D+PV R I         AG L A   GVN N +C WC ++D
Sbjct: 269 KGKLFEDDMNRSTRLKEQFDRPVLRIICLLVFCGILAGVLLAACWGVNLNRHCHWCRYVD 328

Query: 358 CVTSKRWTCNXXXXXXXXXXXXXXXXXXXXXXXXKEISCQVTVSAGRLTVTCKRNDKYRM 537
           CV +K+W+C+                           SC+  VS  +LT+TC  N K+R+
Sbjct: 329 CVPTKKWSCS-----------------------DMTTSCEAMVSDAQLTLTCMANGKFRI 365

Query: 538 YPYADISKARIGDLCSQICS 597
           +P+ +IS+AR  DLC+ +CS
Sbjct: 366 FPFTNISQARTEDLCTLVCS 385