BLASTX nr result

ID: Coptis24_contig00025656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025656
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301444.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_002515080.1| conserved hypothetical protein [Ricinus comm...   126   2e-27
emb|CAN72415.1| hypothetical protein VITISV_027904 [Vitis vinifera]   123   1e-26
ref|XP_002320233.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_003633928.1| PREDICTED: protein NDR1-like isoform 2 [Viti...   122   3e-26

>ref|XP_002301444.1| predicted protein [Populus trichocarpa] gi|222843170|gb|EEE80717.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  134 bits (336), Expect = 1e-29
 Identities = 66/96 (68%), Positives = 74/96 (77%)
 Frame = +2

Query: 2   LPPLYQETKTTVALSPIIGGGFVPVSMEVCNGLVMDQAYXXXXXXXXXXXXXKYKAGAIK 181
           LPPLY  TK+TVALSP++GG  VPVS+EV NGLVMD+AY             ++KAGAIK
Sbjct: 100 LPPLYHATKSTVALSPVLGGAGVPVSVEVSNGLVMDEAYGVVALSVVLLGRLRWKAGAIK 159

Query: 182 TKRYGVFVKCDVMVGLKKGFVGQVPLLGSPDCNVDI 289
           T RYGV+VKCDV VGLKKGFVGQVPLLGSP C VDI
Sbjct: 160 TLRYGVYVKCDVWVGLKKGFVGQVPLLGSPKCKVDI 195


>ref|XP_002515080.1| conserved hypothetical protein [Ricinus communis]
           gi|223545560|gb|EEF47064.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 226

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/96 (61%), Positives = 72/96 (75%)
 Frame = +2

Query: 2   LPPLYQETKTTVALSPIIGGGFVPVSMEVCNGLVMDQAYXXXXXXXXXXXXXKYKAGAIK 181
           LPPLY + K+TVALSP++GG  VPVS+EV NGLVMD++Y             ++KAG IK
Sbjct: 131 LPPLYHDKKSTVALSPVLGGAQVPVSVEVANGLVMDESYGVVALRVVLLGRLRWKAGVIK 190

Query: 182 TKRYGVFVKCDVMVGLKKGFVGQVPLLGSPDCNVDI 289
           T RYGV+VKCD+ VGLK+G VGQVPLLGSP C VD+
Sbjct: 191 TGRYGVYVKCDIWVGLKRGLVGQVPLLGSPQCKVDV 226


>emb|CAN72415.1| hypothetical protein VITISV_027904 [Vitis vinifera]
          Length = 991

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/96 (62%), Positives = 70/96 (72%)
 Frame = +2

Query: 2    LPPLYQETKTTVALSPIIGGGFVPVSMEVCNGLVMDQAYXXXXXXXXXXXXXKYKAGAIK 181
            LPPLY    +TVALSP++GG  VPVS+EV NGLVMD+AY             K+KAGA  
Sbjct: 896  LPPLYHRKHSTVALSPVLGGEAVPVSLEVANGLVMDEAYGVMGLRLVLLGRLKWKAGAFW 955

Query: 182  TKRYGVFVKCDVMVGLKKGFVGQVPLLGSPDCNVDI 289
            +  YGV+VKCDV+VGLKKG VGQVP+LGSP CNVDI
Sbjct: 956  SMHYGVYVKCDVLVGLKKGVVGQVPMLGSPXCNVDI 991


>ref|XP_002320233.1| predicted protein [Populus trichocarpa] gi|222861006|gb|EEE98548.1|
           predicted protein [Populus trichocarpa]
          Length = 214

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/96 (61%), Positives = 71/96 (73%)
 Frame = +2

Query: 2   LPPLYQETKTTVALSPIIGGGFVPVSMEVCNGLVMDQAYXXXXXXXXXXXXXKYKAGAIK 181
           LPPLYQE K+TV +SP++ G  VPVS+EV +GLV D+AY             ++KAG IK
Sbjct: 119 LPPLYQEKKSTVVMSPVLVGAGVPVSVEVSDGLVRDEAYGVVALRVVLLGRLRWKAGGIK 178

Query: 182 TKRYGVFVKCDVMVGLKKGFVGQVPLLGSPDCNVDI 289
           T RYGV+VKCD++VGLKKGFVG VPLLGSP C VDI
Sbjct: 179 TGRYGVYVKCDIVVGLKKGFVGPVPLLGSPQCKVDI 214


>ref|XP_003633928.1| PREDICTED: protein NDR1-like isoform 2 [Vitis vinifera]
          Length = 202

 Score =  122 bits (306), Expect = 3e-26
 Identities = 60/96 (62%), Positives = 70/96 (72%)
 Frame = +2

Query: 2   LPPLYQETKTTVALSPIIGGGFVPVSMEVCNGLVMDQAYXXXXXXXXXXXXXKYKAGAIK 181
           LPPLY    +TVALSP++GG  VPVS+EV NGLVMD+AY             K+KAGA  
Sbjct: 107 LPPLYHRKHSTVALSPVLGGEAVPVSLEVANGLVMDEAYGVMGLRLVLLGRLKWKAGAFW 166

Query: 182 TKRYGVFVKCDVMVGLKKGFVGQVPLLGSPDCNVDI 289
           +  YGV+VKCDV+VGLKKG VGQVP+LGSP CNVDI
Sbjct: 167 SMHYGVYVKCDVLVGLKKGVVGQVPMLGSPLCNVDI 202


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