BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025649
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528785.1| RNA binding protein, putative [Ricinus commu...   313   1e-83
ref|XP_002329588.1| predicted protein [Populus trichocarpa] gi|2...   306   2e-81
emb|CBI29620.3| unnamed protein product [Vitis vinifera]              303   2e-80
ref|XP_002269047.1| PREDICTED: uncharacterized mitochondrial pro...   303   2e-80
ref|NP_199503.1| Intron maturase, type II family protein [Arabid...   295   3e-78

>ref|XP_002528785.1| RNA binding protein, putative [Ricinus communis]
           gi|223531788|gb|EEF33607.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 732

 Score =  313 bits (802), Expect = 1e-83
 Identities = 150/194 (77%), Positives = 174/194 (89%)
 Frame = -1

Query: 582 SLFRCMSNIAMQRRVVTDPDDVSTLMREDGVAICSTMWIDNFREPDKTVSNLIDYLRHFE 403
           +LFR +S   M RR   DPDD +TLM+EDGV++CS MWI+NFREPD+TV+NL  YLR FE
Sbjct: 42  ALFRLLSFTPMHRRN-PDPDDPATLMKEDGVSVCSQMWIENFREPDRTVNNLTSYLRRFE 100

Query: 402 LWVLAYQKVSADEIGTFMPKSAIQKPALEDLLALRNAVLDNRFKWGSRLDFFVRSPKDKT 223
           LWVLAYQKVSADE+G ++P+SAIQ+ ALEDLLALRNAVLDNRFKWG+RL FF++SPKDKT
Sbjct: 101 LWVLAYQKVSADEMGAYLPRSAIQRSALEDLLALRNAVLDNRFKWGARLQFFIKSPKDKT 160

Query: 222 DLQGLSKRKIRAILTTTQPAAFQDRVVQEVLLMMLEPIYEARFSQKSYAFRPGRNAHTVL 43
           D + LSKRKI+AILTTTQPAAFQD++VQEVL M+LEPIYEARFSQKSYAFRPGRNAHT L
Sbjct: 161 DYESLSKRKIKAILTTTQPAAFQDKIVQEVLFMILEPIYEARFSQKSYAFRPGRNAHTAL 220

Query: 42  RVIRRNFAGYLWYV 1
           RVIRR+FAGYLWY+
Sbjct: 221 RVIRRSFAGYLWYI 234


>ref|XP_002329588.1| predicted protein [Populus trichocarpa] gi|222870297|gb|EEF07428.1|
           predicted protein [Populus trichocarpa]
          Length = 675

 Score =  306 bits (784), Expect = 2e-81
 Identities = 144/177 (81%), Positives = 163/177 (92%)
 Frame = -1

Query: 531 DPDDVSTLMREDGVAICSTMWIDNFREPDKTVSNLIDYLRHFELWVLAYQKVSADEIGTF 352
           DPDD S LM+EDGV++CS MWI+NFREPD+ VSNL  YLR FELWVLAYQKV AD++G +
Sbjct: 1   DPDDPSNLMKEDGVSVCSQMWIENFREPDRIVSNLTTYLRRFELWVLAYQKVCADDMGAY 60

Query: 351 MPKSAIQKPALEDLLALRNAVLDNRFKWGSRLDFFVRSPKDKTDLQGLSKRKIRAILTTT 172
           MP+SAIQ+ ALEDLLALRNAVLDNRFKWG+RLDF ++SPKDKTD Q LSKRKI+AILTTT
Sbjct: 61  MPRSAIQRSALEDLLALRNAVLDNRFKWGARLDFLIKSPKDKTDYQSLSKRKIKAILTTT 120

Query: 171 QPAAFQDRVVQEVLLMMLEPIYEARFSQKSYAFRPGRNAHTVLRVIRRNFAGYLWYV 1
           QPAAFQD++VQEVL M+LEPIYEARFSQKS+AFRPGRNAHTVLRVIRRNFAGYLWY+
Sbjct: 121 QPAAFQDKIVQEVLFMILEPIYEARFSQKSFAFRPGRNAHTVLRVIRRNFAGYLWYI 177


>emb|CBI29620.3| unnamed protein product [Vitis vinifera]
          Length = 730

 Score =  303 bits (775), Expect = 2e-80
 Identities = 146/194 (75%), Positives = 169/194 (87%)
 Frame = -1

Query: 582 SLFRCMSNIAMQRRVVTDPDDVSTLMREDGVAICSTMWIDNFREPDKTVSNLIDYLRHFE 403
           S FR  S  A  RR   DPDD STLM+EDGVA+CS MWIDNFR PD TV+NL  +LR FE
Sbjct: 54  SFFRAFSFAAANRRT-PDPDDPSTLMKEDGVALCSQMWIDNFRVPDATVTNLTSFLRRFE 112

Query: 402 LWVLAYQKVSADEIGTFMPKSAIQKPALEDLLALRNAVLDNRFKWGSRLDFFVRSPKDKT 223
           LWVLAYQKV ADE+G +MP+SAIQ+ ALEDLL LRNAVLD+RFKWG+RL+FF++SPKDKT
Sbjct: 113 LWVLAYQKVCADEMGAYMPRSAIQRSALEDLLGLRNAVLDSRFKWGARLEFFIKSPKDKT 172

Query: 222 DLQGLSKRKIRAILTTTQPAAFQDRVVQEVLLMMLEPIYEARFSQKSYAFRPGRNAHTVL 43
           + + LSKRKIRAILTTTQPA FQD++VQEVL M+LEPIYEARFS+KS+AFRPGRNAH+VL
Sbjct: 173 EYESLSKRKIRAILTTTQPAPFQDKIVQEVLFMILEPIYEARFSEKSFAFRPGRNAHSVL 232

Query: 42  RVIRRNFAGYLWYV 1
           RVIRR+FAGYLWY+
Sbjct: 233 RVIRRSFAGYLWYI 246


>ref|XP_002269047.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
           vinifera]
          Length = 749

 Score =  303 bits (775), Expect = 2e-80
 Identities = 146/194 (75%), Positives = 169/194 (87%)
 Frame = -1

Query: 582 SLFRCMSNIAMQRRVVTDPDDVSTLMREDGVAICSTMWIDNFREPDKTVSNLIDYLRHFE 403
           S FR  S  A  RR   DPDD STLM+EDGVA+CS MWIDNFR PD TV+NL  +LR FE
Sbjct: 57  SFFRAFSFAAANRRT-PDPDDPSTLMKEDGVALCSQMWIDNFRVPDATVTNLTSFLRRFE 115

Query: 402 LWVLAYQKVSADEIGTFMPKSAIQKPALEDLLALRNAVLDNRFKWGSRLDFFVRSPKDKT 223
           LWVLAYQKV ADE+G +MP+SAIQ+ ALEDLL LRNAVLD+RFKWG+RL+FF++SPKDKT
Sbjct: 116 LWVLAYQKVCADEMGAYMPRSAIQRSALEDLLGLRNAVLDSRFKWGARLEFFIKSPKDKT 175

Query: 222 DLQGLSKRKIRAILTTTQPAAFQDRVVQEVLLMMLEPIYEARFSQKSYAFRPGRNAHTVL 43
           + + LSKRKIRAILTTTQPA FQD++VQEVL M+LEPIYEARFS+KS+AFRPGRNAH+VL
Sbjct: 176 EYESLSKRKIRAILTTTQPAPFQDKIVQEVLFMILEPIYEARFSEKSFAFRPGRNAHSVL 235

Query: 42  RVIRRNFAGYLWYV 1
           RVIRR+FAGYLWY+
Sbjct: 236 RVIRRSFAGYLWYI 249


>ref|NP_199503.1| Intron maturase, type II family protein [Arabidopsis thaliana]
           gi|9759434|dbj|BAB10231.1| unnamed protein product
           [Arabidopsis thaliana] gi|332008065|gb|AED95448.1|
           Intron maturase, type II family protein [Arabidopsis
           thaliana]
          Length = 735

 Score =  295 bits (756), Expect = 3e-78
 Identities = 139/198 (70%), Positives = 171/198 (86%), Gaps = 4/198 (2%)
 Frame = -1

Query: 582 SLFRCMSNIAMQRR----VVTDPDDVSTLMREDGVAICSTMWIDNFREPDKTVSNLIDYL 415
           ++FR +S  A Q+R       DPDD + L++EDGV++CS MW++NF+EPDKT +NL  YL
Sbjct: 41  AIFRYLSYFAPQQRRQQQQAPDPDDPANLLKEDGVSLCSQMWLENFKEPDKTATNLTSYL 100

Query: 414 RHFELWVLAYQKVSADEIGTFMPKSAIQKPALEDLLALRNAVLDNRFKWGSRLDFFVRSP 235
           R FELWVLAYQKV  DE+G ++P+S+IQ+ ALE+LLALRN+VLD+RFKWGSRLDF+++SP
Sbjct: 101 RRFELWVLAYQKVCCDELGAYVPRSSIQRSALENLLALRNSVLDDRFKWGSRLDFYIKSP 160

Query: 234 KDKTDLQGLSKRKIRAILTTTQPAAFQDRVVQEVLLMMLEPIYEARFSQKSYAFRPGRNA 55
           +DKTD + LSKRKI+AILTTTQP  FQDR+VQEVLLM+LEPIYE+RFSQKS+AFRPGR A
Sbjct: 161 RDKTDYESLSKRKIKAILTTTQPTPFQDRIVQEVLLMILEPIYESRFSQKSFAFRPGRTA 220

Query: 54  HTVLRVIRRNFAGYLWYV 1
           HTVLRVIRRNFAGYLWYV
Sbjct: 221 HTVLRVIRRNFAGYLWYV 238