BLASTX nr result
ID: Coptis24_contig00025632
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00025632
(608 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|22... 251 9e-65
ref|XP_002308898.1| condensin complex components subunit [Populu... 248 5e-64
ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like ... 246 2e-63
ref|XP_004166468.1| PREDICTED: condensin complex subunit 1-like,... 240 1e-61
ref|XP_004136646.1| PREDICTED: condensin complex subunit 1-like ... 240 1e-61
>ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|223531386|gb|EEF33221.1|
condensin, putative [Ricinus communis]
Length = 1346
Score = 251 bits (640), Expect = 9e-65
Identities = 134/204 (65%), Positives = 161/204 (78%), Gaps = 2/204 (0%)
Frame = -3
Query: 606 FGPQLRISSFKATLEKYREKLSEQEPAACVDGHFDAMLPDIVTSEENGKGDHRRSEGEVV 427
FGPQLRI+SF+ATLE+Y++KL+E EP D + D S+ + D+ +E EV
Sbjct: 456 FGPQLRIASFEATLEQYKKKLNELEPDESAQNARDGLKSDNDASDGGDEVDNVNAE-EVA 514
Query: 426 E--DHDISDSYLPHVEDGATQKDSLVANIGNSEQNRALVASLEAGLRFSECLSDTMPTLV 253
E ++DS LPH+EDG TQKDS V ++GN EQ RALVASLEAGLRFS+C+S TMPTLV
Sbjct: 515 EKQQESLTDSCLPHLEDGITQKDSSVPDVGNLEQTRALVASLEAGLRFSKCISATMPTLV 574
Query: 252 QLMASSSATDVENTILLLMRCRQFEVDGSEACLRKMLPLVFSQDKSVSDAVEDAFITIYI 73
QLMASSSATDVENTILLLMRCRQF++DG+E CLRKMLPLVFSQDKS+ +AVE+AFI IY+
Sbjct: 575 QLMASSSATDVENTILLLMRCRQFQIDGAEECLRKMLPLVFSQDKSIYEAVENAFIAIYV 634
Query: 72 RKNANDTAKKLLDLAIDSNIGDLA 1
RK +TAK +L LAIDSNIGDLA
Sbjct: 635 RKLPVETAKNILSLAIDSNIGDLA 658
>ref|XP_002308898.1| condensin complex components subunit [Populus trichocarpa]
gi|222854874|gb|EEE92421.1| condensin complex components
subunit [Populus trichocarpa]
Length = 1334
Score = 248 bits (634), Expect = 5e-64
Identities = 133/202 (65%), Positives = 158/202 (78%)
Frame = -3
Query: 606 FGPQLRISSFKATLEKYREKLSEQEPAACVDGHFDAMLPDIVTSEENGKGDHRRSEGEVV 427
FGPQLRI+SF+ATLE+Y +KL+E EP + D + D T + G+ D E V
Sbjct: 452 FGPQLRIASFQATLEQYNKKLNELEPDKSAESVLDGLQSDNETYD-GGEVDDVNMEEPVK 510
Query: 426 EDHDISDSYLPHVEDGATQKDSLVANIGNSEQNRALVASLEAGLRFSECLSDTMPTLVQL 247
E + +P++E+G QKDS V +IGN EQ RALVASLEAGL FS+C+S TMPTLVQL
Sbjct: 511 EQQESLTDSVPNLEEGIPQKDSSVPDIGNLEQTRALVASLEAGLIFSKCVSATMPTLVQL 570
Query: 246 MASSSATDVENTILLLMRCRQFEVDGSEACLRKMLPLVFSQDKSVSDAVEDAFITIYIRK 67
MASSSATDVENTILLLMRC+QF++DG+EACLRKMLPLVFSQDKS+ +AVE+AFITIY+RK
Sbjct: 571 MASSSATDVENTILLLMRCKQFQIDGAEACLRKMLPLVFSQDKSIYEAVENAFITIYVRK 630
Query: 66 NANDTAKKLLDLAIDSNIGDLA 1
N DTAK LLDLAIDSNIGDLA
Sbjct: 631 NPLDTAKNLLDLAIDSNIGDLA 652
>ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like [Vitis vinifera]
Length = 1346
Score = 246 bits (628), Expect = 2e-63
Identities = 131/206 (63%), Positives = 161/206 (78%), Gaps = 4/206 (1%)
Frame = -3
Query: 606 FGPQLRISSFKATLEKYREKLSEQEPAACVDGHFDAMLPDIVTSEENGKGDHRRSE--GE 433
FGPQLRI+SF+ATLE+Y++KL+E +P + D + D T +G+ D E G+
Sbjct: 444 FGPQLRIASFEATLEQYKKKLNELQPNLASESVLDGLPSDGDTCNGDGEVDSGNEEEVGQ 503
Query: 432 VV--EDHDISDSYLPHVEDGATQKDSLVANIGNSEQNRALVASLEAGLRFSECLSDTMPT 259
V + ++DS LPH +G + DS V ++GN EQ RALVASLEAGLRFS+C+S TMPT
Sbjct: 504 VAKGQQDSLTDSCLPHTAEGIVENDSPVPDVGNLEQTRALVASLEAGLRFSKCVSATMPT 563
Query: 258 LVQLMASSSATDVENTILLLMRCRQFEVDGSEACLRKMLPLVFSQDKSVSDAVEDAFITI 79
LVQLMASSSATDVENTILLLMRC+QF+VDGSEACLRKM PLVFSQDKS +AVE+AF+TI
Sbjct: 564 LVQLMASSSATDVENTILLLMRCKQFQVDGSEACLRKMFPLVFSQDKSTYEAVENAFVTI 623
Query: 78 YIRKNANDTAKKLLDLAIDSNIGDLA 1
YIRK++ +TAK LL+LAIDSNIGDLA
Sbjct: 624 YIRKSSMETAKNLLNLAIDSNIGDLA 649
>ref|XP_004166468.1| PREDICTED: condensin complex subunit 1-like, partial [Cucumis
sativus]
Length = 1133
Score = 240 bits (613), Expect = 1e-61
Identities = 133/207 (64%), Positives = 158/207 (76%), Gaps = 5/207 (2%)
Frame = -3
Query: 606 FGPQLRISSFKATLEKYREKLSEQEP---AACVDGH--FDAMLPDIVTSEENGKGDHRRS 442
FGPQLR+ SF+ATLE+Y++KL E EP + VDG FD DI + H +
Sbjct: 445 FGPQLRVVSFEATLEQYKKKLDELEPNKSSENVDGGSPFDG---DIFNGDGEVDNGHIKG 501
Query: 441 EGEVVEDHDISDSYLPHVEDGATQKDSLVANIGNSEQNRALVASLEAGLRFSECLSDTMP 262
EG +D ++DSY P +E+ QKD+L ++GN+EQ RALVASLEAGLRFS C+S+ MP
Sbjct: 502 EGGNRQD-SLTDSYPPQMEEEVVQKDNLTLDVGNTEQIRALVASLEAGLRFSTCISEAMP 560
Query: 261 TLVQLMASSSATDVENTILLLMRCRQFEVDGSEACLRKMLPLVFSQDKSVSDAVEDAFIT 82
LVQLMASSSATDVENTILLLMRCRQF++DGSEACLRKMLPL FSQDKS+ +AVE+AFIT
Sbjct: 561 ILVQLMASSSATDVENTILLLMRCRQFQIDGSEACLRKMLPLAFSQDKSIYEAVENAFIT 620
Query: 81 IYIRKNANDTAKKLLDLAIDSNIGDLA 1
IYI KN +TAK LL LAIDSNIGDLA
Sbjct: 621 IYITKNQIETAKNLLHLAIDSNIGDLA 647
>ref|XP_004136646.1| PREDICTED: condensin complex subunit 1-like [Cucumis sativus]
Length = 1321
Score = 240 bits (613), Expect = 1e-61
Identities = 133/207 (64%), Positives = 158/207 (76%), Gaps = 5/207 (2%)
Frame = -3
Query: 606 FGPQLRISSFKATLEKYREKLSEQEP---AACVDGH--FDAMLPDIVTSEENGKGDHRRS 442
FGPQLR+ SF+ATLE+Y++KL E EP + VDG FD DI + H +
Sbjct: 445 FGPQLRVVSFEATLEQYKKKLDELEPNKSSENVDGGSPFDG---DIFNGDGEVDNGHIKG 501
Query: 441 EGEVVEDHDISDSYLPHVEDGATQKDSLVANIGNSEQNRALVASLEAGLRFSECLSDTMP 262
EG +D ++DSY P +E+ QKD+L ++GN+EQ RALVASLEAGLRFS C+S+ MP
Sbjct: 502 EGGNRQD-SLTDSYPPQMEEEVVQKDNLTLDVGNTEQIRALVASLEAGLRFSTCISEAMP 560
Query: 261 TLVQLMASSSATDVENTILLLMRCRQFEVDGSEACLRKMLPLVFSQDKSVSDAVEDAFIT 82
LVQLMASSSATDVENTILLLMRCRQF++DGSEACLRKMLPL FSQDKS+ +AVE+AFIT
Sbjct: 561 ILVQLMASSSATDVENTILLLMRCRQFQIDGSEACLRKMLPLAFSQDKSIYEAVENAFIT 620
Query: 81 IYIRKNANDTAKKLLDLAIDSNIGDLA 1
IYI KN +TAK LL LAIDSNIGDLA
Sbjct: 621 IYITKNQIETAKNLLHLAIDSNIGDLA 647