BLASTX nr result

ID: Coptis24_contig00025622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025622
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329845.1| predicted protein [Populus trichocarpa] gi|2...   196   1e-48
ref|XP_002304444.1| predicted protein [Populus trichocarpa] gi|2...   190   9e-47
ref|XP_003550892.1| PREDICTED: MATE efflux family protein DTX1-l...   188   3e-46
ref|XP_003525554.1| PREDICTED: MATE efflux family protein DTX1-l...   180   1e-43
ref|XP_003611216.1| Multidrug and toxin extrusion protein [Medic...   178   4e-43

>ref|XP_002329845.1| predicted protein [Populus trichocarpa] gi|222871082|gb|EEF08213.1|
           predicted protein [Populus trichocarpa]
          Length = 456

 Score =  196 bits (499), Expect = 1e-48
 Identities = 98/137 (71%), Positives = 110/137 (80%)
 Frame = +3

Query: 3   EILVLLTGRLPNXXXXXXXXXXXXNFDYLLYSIMLSLATCASTRVSNELGSNHAEQAYKS 182
           EIL+LLTGRLPN            NFDYLL+S+MLSLATCASTRVSNELG+N A +AY+S
Sbjct: 253 EILILLTGRLPNAKQAVGVIAIVLNFDYLLFSVMLSLATCASTRVSNELGANQAGRAYQS 312

Query: 183 AYVSLGVSVIFGCIGGSLMVSVRGVWGSLFSHNEEILNGVKKMMLLMAIIEVVNFPVVVS 362
           AYVSLG S I GCIG  +MV VRGVWGSLFSH++ I+ GVKK MLLMA+IEVVNFP+ V 
Sbjct: 313 AYVSLGASTISGCIGALVMVGVRGVWGSLFSHDQGIIKGVKKTMLLMALIEVVNFPLAVC 372

Query: 363 GGIVRGTASPWLAMYAN 413
           GGIVRGTA PWL MYAN
Sbjct: 373 GGIVRGTARPWLGMYAN 389


>ref|XP_002304444.1| predicted protein [Populus trichocarpa] gi|222841876|gb|EEE79423.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score =  190 bits (483), Expect = 9e-47
 Identities = 93/137 (67%), Positives = 108/137 (78%)
 Frame = +3

Query: 3   EILVLLTGRLPNXXXXXXXXXXXXNFDYLLYSIMLSLATCASTRVSNELGSNHAEQAYKS 182
           EILVLLTGRLPN            NFDYLL+S+MLSLATCASTRVSNELG+N A +AY+S
Sbjct: 268 EILVLLTGRLPNARQAVGVVAIVMNFDYLLFSVMLSLATCASTRVSNELGANQAGRAYQS 327

Query: 183 AYVSLGVSVIFGCIGGSLMVSVRGVWGSLFSHNEEILNGVKKMMLLMAIIEVVNFPVVVS 362
           AYVSLG S + GC+G  +M+  RGVWGSLF+H++ I  GVKKMMLLMA+IEVVNFP+ V 
Sbjct: 328 AYVSLGASTVSGCVGALVMIGARGVWGSLFTHDQGIRKGVKKMMLLMALIEVVNFPLAVC 387

Query: 363 GGIVRGTASPWLAMYAN 413
           GGI RGTA PWL+ YAN
Sbjct: 388 GGIARGTARPWLSTYAN 404


>ref|XP_003550892.1| PREDICTED: MATE efflux family protein DTX1-like [Glycine max]
          Length = 468

 Score =  188 bits (478), Expect = 3e-46
 Identities = 95/137 (69%), Positives = 106/137 (77%)
 Frame = +3

Query: 3   EILVLLTGRLPNXXXXXXXXXXXXNFDYLLYSIMLSLATCASTRVSNELGSNHAEQAYKS 182
           EILVLLTG L N            NFDYLLYS+MLSLATC STRVSNELG+N A QAYKS
Sbjct: 251 EILVLLTGHLANAKQALGVLAIVLNFDYLLYSVMLSLATCVSTRVSNELGANSAGQAYKS 310

Query: 183 AYVSLGVSVIFGCIGGSLMVSVRGVWGSLFSHNEEILNGVKKMMLLMAIIEVVNFPVVVS 362
           A VSL V VI GCIGGS+MV+ RGVWG+LFSH++ ++ GVKK M LMA++EV NFPV V 
Sbjct: 311 ARVSLAVGVISGCIGGSMMVASRGVWGNLFSHDKGVVKGVKKTMFLMALVEVFNFPVTVC 370

Query: 363 GGIVRGTASPWLAMYAN 413
           GGIVRGTA PWL MYAN
Sbjct: 371 GGIVRGTARPWLGMYAN 387


>ref|XP_003525554.1| PREDICTED: MATE efflux family protein DTX1-like [Glycine max]
          Length = 525

 Score =  180 bits (456), Expect = 1e-43
 Identities = 90/137 (65%), Positives = 105/137 (76%)
 Frame = +3

Query: 3   EILVLLTGRLPNXXXXXXXXXXXXNFDYLLYSIMLSLATCASTRVSNELGSNHAEQAYKS 182
           EIL+ LTG L N            NFDYLLY++MLSLAT  STRVSNELG+N A QAYKS
Sbjct: 290 EILLFLTGHLANAKQAVGVLAIVLNFDYLLYAVMLSLATSVSTRVSNELGANRAGQAYKS 349

Query: 183 AYVSLGVSVIFGCIGGSLMVSVRGVWGSLFSHNEEILNGVKKMMLLMAIIEVVNFPVVVS 362
           A VSL VSVI GCIGGS+MV+ RGVWG+LFSH + ++ GV+K MLLMA++EV NFPV V 
Sbjct: 350 ARVSLAVSVISGCIGGSIMVAARGVWGNLFSHQKGVVKGVEKAMLLMALVEVFNFPVTVC 409

Query: 363 GGIVRGTASPWLAMYAN 413
           GGIVRGT  PWL+MYA+
Sbjct: 410 GGIVRGTGRPWLSMYAS 426


>ref|XP_003611216.1| Multidrug and toxin extrusion protein [Medicago truncatula]
           gi|355512551|gb|AES94174.1| Multidrug and toxin
           extrusion protein [Medicago truncatula]
          Length = 511

 Score =  178 bits (452), Expect = 4e-43
 Identities = 87/137 (63%), Positives = 103/137 (75%)
 Frame = +3

Query: 3   EILVLLTGRLPNXXXXXXXXXXXXNFDYLLYSIMLSLATCASTRVSNELGSNHAEQAYKS 182
           EILVLLTG L N            NFDYLL+S+MLSLATC STRVSNELG+N A++AY+S
Sbjct: 289 EILVLLTGHLANARQALGVLAIVLNFDYLLFSVMLSLATCVSTRVSNELGANQADRAYRS 348

Query: 183 AYVSLGVSVIFGCIGGSLMVSVRGVWGSLFSHNEEILNGVKKMMLLMAIIEVVNFPVVVS 362
           A VSLG+  I GC G  +MV+ RG+WG LFSH+   +NGVKK MLLMA++E+ NFP+ V 
Sbjct: 349 ARVSLGLGFITGCTGSLVMVAARGIWGQLFSHDRGTINGVKKTMLLMALVELFNFPLAVC 408

Query: 363 GGIVRGTASPWLAMYAN 413
           GGIVRGTA PWL MYAN
Sbjct: 409 GGIVRGTARPWLGMYAN 425