BLASTX nr result

ID: Coptis24_contig00025601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025601
         (771 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268276.2| PREDICTED: uncharacterized protein LOC100246...   117   3e-24
emb|CBI29529.3| unnamed protein product [Vitis vinifera]              114   2e-23
ref|XP_002519023.1| zinc finger protein, putative [Ricinus commu...   113   4e-23
ref|XP_002305681.1| predicted protein [Populus trichocarpa] gi|2...    94   3e-17
ref|XP_002316631.1| predicted protein [Populus trichocarpa] gi|2...    93   6e-17

>ref|XP_002268276.2| PREDICTED: uncharacterized protein LOC100246521 [Vitis vinifera]
          Length = 295

 Score =  117 bits (293), Expect = 3e-24
 Identities = 78/231 (33%), Positives = 110/231 (47%), Gaps = 15/231 (6%)
 Frame = -2

Query: 770 FCYYNNYNRSQPRHFCKSCRRHWTKGGTLRNVPVGGGRKNXXXXXXXXXXXXXXXXXXXX 591
           FCY+NNYN+SQPRHFCKSC+RHWTKGGTLRNVPVGGGRKN                    
Sbjct: 60  FCYFNNYNKSQPRHFCKSCKRHWTKGGTLRNVPVGGGRKNKRPKTSATATAAAATPTVTS 119

Query: 590 SHGSKITKDL---------IXXXXXXXXXXXXXXGDERKFSEILYQSLLQSTTSPLVPXX 438
           S  +  T  +         I               ++   S+ILYQ+ ++   S  V   
Sbjct: 120 SPATPTTSSITNRSNINMGIQTQQQRKSSLALGDHEKSSLSDILYQAFIRPPLS--VMQQ 177

Query: 437 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAFN-NPTSMSSPFNAGFQSPNVLNYSGEA 261
                                         S+F+ +P+S+ S     FQ  NV NY+GEA
Sbjct: 178 NSIGSSNGMSMASIPSLPPNQNLHFPFRSLSSFDTSPSSIPS----SFQPSNVYNYTGEA 233

Query: 260 KCSEDFSTSATITP-----MPVQLQIPSTNSEVDSSSYWNWDDLNILI*TD 123
           + ++D ST+A   P     +    Q+P+ +S VD+++YW+WDD++  + TD
Sbjct: 234 E-AKDGSTTACFMPSTSGTITQPWQMPAASSVVDTTNYWSWDDIDTFVSTD 283


>emb|CBI29529.3| unnamed protein product [Vitis vinifera]
          Length = 240

 Score =  114 bits (285), Expect = 2e-23
 Identities = 74/219 (33%), Positives = 105/219 (47%), Gaps = 6/219 (2%)
 Frame = -2

Query: 770 FCYYNNYNRSQPRHFCKSCRRHWTKGGTLRNVPVGGGRKNXXXXXXXXXXXXXXXXXXXX 591
           FCY+NNYN+SQPRHFCKSC+RHWTKGGTLRNVPVGGGRKN                    
Sbjct: 28  FCYFNNYNKSQPRHFCKSCKRHWTKGGTLRNVPVGGGRKNKRPKT--------------- 72

Query: 590 SHGSKITKDLIXXXXXXXXXXXXXXGDERKFSEILYQSLLQSTTSPLVPXXXXXXXXXXX 411
              +  T                   ++   S+ILYQ+ ++   S  V            
Sbjct: 73  --SATATAAAATPTQQRKSSLALGDHEKSSLSDILYQAFIRPPLS--VMQQNSIGSSNGM 128

Query: 410 XXXXXXXXXXXXXXXXXXXXXSAFN-NPTSMSSPFNAGFQSPNVLNYSGEAKCSEDFSTS 234
                                S+F+ +P+S+ S     FQ  NV NY+GEA+ ++D ST+
Sbjct: 129 SMASIPSLPPNQNLHFPFRSLSSFDTSPSSIPS----SFQPSNVYNYTGEAE-AKDGSTT 183

Query: 233 ATITP-----MPVQLQIPSTNSEVDSSSYWNWDDLNILI 132
           A   P     +    Q+P+ +S VD+++YW+WDD++  +
Sbjct: 184 ACFMPSTSGTITQPWQMPAASSVVDTTNYWSWDDIDTFV 222


>ref|XP_002519023.1| zinc finger protein, putative [Ricinus communis]
           gi|223541686|gb|EEF43234.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 307

 Score =  113 bits (283), Expect = 4e-23
 Identities = 80/237 (33%), Positives = 102/237 (43%), Gaps = 24/237 (10%)
 Frame = -2

Query: 770 FCYYNNYNRSQPRHFCKSCRRHWTKGGTLRNVPVGGGRKNXXXXXXXXXXXXXXXXXXXX 591
           FCYYNNYN+SQPRHFCKSC+RHWTKGGTLRNVPVGGGRKN                    
Sbjct: 60  FCYYNNYNKSQPRHFCKSCKRHWTKGGTLRNVPVGGGRKNKRLKTSKTTAKTAATTTTCT 119

Query: 590 SHGSKIT--------KDLIXXXXXXXXXXXXXXGDERKFSEILYQSLLQSTTSPLVPXXX 435
           +  S I+          ++              GD++  SEI+ QSL+ S  S ++    
Sbjct: 120 TSTSNISGKILNTVNPQMVIQAQKQKQNLPLGLGDQKSTSEIMRQSLI-SQPSSVLQQNS 178

Query: 434 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAFNNPTSMSSPFNA-------GFQSPNVLN 276
                                           N P   SS F+         FQ+ NV N
Sbjct: 179 ISCSNFVSKSFNTGNNGIFLGTTLSLPQNQELNFPYLNSSSFDTNPSSISNSFQASNVYN 238

Query: 275 YSGEAKCSEDFSTSATITPMPV--------QL-QIPSTNSEVDSSSYWNWDDLNILI 132
           YS      E    S   T MP         QL Q+P+ +  +D +SYWNWDD++ L+
Sbjct: 239 YS----TGETMDDSVITTVMPTASSCITHHQLWQVPNASRGMDITSYWNWDDIDNLV 291


>ref|XP_002305681.1| predicted protein [Populus trichocarpa] gi|222848645|gb|EEE86192.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 37/40 (92%), Positives = 40/40 (100%)
 Frame = -2

Query: 770 FCYYNNYNRSQPRHFCKSCRRHWTKGGTLRNVPVGGGRKN 651
           FCYYNNYN+SQPRHFCK+C+RHWTKGGTLRNVPVGGGRKN
Sbjct: 59  FCYYNNYNKSQPRHFCKTCKRHWTKGGTLRNVPVGGGRKN 98


>ref|XP_002316631.1| predicted protein [Populus trichocarpa] gi|222859696|gb|EEE97243.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 37/40 (92%), Positives = 39/40 (97%)
 Frame = -2

Query: 770 FCYYNNYNRSQPRHFCKSCRRHWTKGGTLRNVPVGGGRKN 651
           FCYYNNYN+SQPRHFCKSC+RHWTKGG LRNVPVGGGRKN
Sbjct: 59  FCYYNNYNKSQPRHFCKSCKRHWTKGGNLRNVPVGGGRKN 98


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