BLASTX nr result

ID: Coptis24_contig00025597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025597
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315049.1| predicted protein [Populus trichocarpa] gi|2...   296   3e-78
ref|XP_002522445.1| conserved hypothetical protein [Ricinus comm...   295   3e-78
ref|XP_002312247.1| predicted protein [Populus trichocarpa] gi|2...   291   5e-77
ref|XP_002278425.1| PREDICTED: uncharacterized protein LOC100243...   291   6e-77
ref|XP_004146729.1| PREDICTED: uncharacterized protein LOC101222...   285   4e-75

>ref|XP_002315049.1| predicted protein [Populus trichocarpa] gi|222864089|gb|EEF01220.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  296 bits (757), Expect = 3e-78
 Identities = 136/177 (76%), Positives = 161/177 (90%)
 Frame = -2

Query: 607 RRAVANGVQKTLSKTSMLANFLPTGTLLTFSMVLPSVSADGNCSPVNTMMIYVLIGLCSL 428
           RRAVA G+QKT+SKTSML NFLPTGTLLTF M+LPS+S +G C+PV  +MIY L+GLCSL
Sbjct: 57  RRAVAKGMQKTISKTSMLVNFLPTGTLLTFEMLLPSISKNGVCTPVTALMIYALLGLCSL 116

Query: 427 SCFFFHFTDSFKDPEGKVYYGFVTPRGLAVFKSGLGVEIPKDERYKLGFHDLLHALMSVM 248
           SCFFFHFTDSFK P+ K+YYGFVT +GLAVFK GL V++PKDERY++GF DL+HA+MSVM
Sbjct: 117 SCFFFHFTDSFKGPDDKIYYGFVTTKGLAVFKPGLTVDVPKDERYRVGFTDLVHAVMSVM 176

Query: 247 VFMAIALSDHRITNCLFPGHVEDMDQVMESFPLMVGIICSGLFLVFPTTRYGIGCMA 77
           VFMAIALSDHR+T CLFPGHV++M +VMESFPLMVG+ICSGLFLVFPT+R+GIGCM+
Sbjct: 177 VFMAIALSDHRVTGCLFPGHVKEMGEVMESFPLMVGVICSGLFLVFPTSRHGIGCMS 233


>ref|XP_002522445.1| conserved hypothetical protein [Ricinus communis]
           gi|223538330|gb|EEF39937.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 221

 Score =  295 bits (756), Expect = 3e-78
 Identities = 135/177 (76%), Positives = 161/177 (90%)
 Frame = -2

Query: 607 RRAVANGVQKTLSKTSMLANFLPTGTLLTFSMVLPSVSADGNCSPVNTMMIYVLIGLCSL 428
           R+A+A GVQKTLSKTSML NFLPTGTLLTF M+LPSV  +G C+ V+ +M+ +L+GLC++
Sbjct: 44  RQAMAKGVQKTLSKTSMLVNFLPTGTLLTFEMILPSVIKNGECTHVSILMLLLLLGLCAV 103

Query: 427 SCFFFHFTDSFKDPEGKVYYGFVTPRGLAVFKSGLGVEIPKDERYKLGFHDLLHALMSVM 248
           SCFFFHFTDSFK P+GKVYYGFVTP+GLAVFK GLGV++PKDERYK+G  D +HA+MSV+
Sbjct: 104 SCFFFHFTDSFKGPDGKVYYGFVTPKGLAVFKPGLGVQVPKDERYKVGLTDFVHAMMSVL 163

Query: 247 VFMAIALSDHRITNCLFPGHVEDMDQVMESFPLMVGIICSGLFLVFPTTRYGIGCMA 77
           VF AIALSDHR+T+CLFPGHV++MDQVMESFP+MVGI+CSGLFLVFP TRYGIGCMA
Sbjct: 164 VFAAIALSDHRVTDCLFPGHVKEMDQVMESFPIMVGIVCSGLFLVFPNTRYGIGCMA 220


>ref|XP_002312247.1| predicted protein [Populus trichocarpa] gi|222852067|gb|EEE89614.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  291 bits (746), Expect = 5e-77
 Identities = 134/177 (75%), Positives = 160/177 (90%)
 Frame = -2

Query: 607 RRAVANGVQKTLSKTSMLANFLPTGTLLTFSMVLPSVSADGNCSPVNTMMIYVLIGLCSL 428
           RRAVA G+QKT+SKTSML NFLPTGTLLTF M+LPS+S +G C+PV  +MI+VL+GLCS+
Sbjct: 57  RRAVAKGMQKTISKTSMLVNFLPTGTLLTFEMLLPSISRNGVCTPVTALMIHVLLGLCSV 116

Query: 427 SCFFFHFTDSFKDPEGKVYYGFVTPRGLAVFKSGLGVEIPKDERYKLGFHDLLHALMSVM 248
           SCF FHFTDSFK P+ K+YYGFVT +GLAVF  GL V++PKDERYK+GF D +HA+MSVM
Sbjct: 117 SCFLFHFTDSFKGPDDKIYYGFVTTKGLAVFNPGLTVDVPKDERYKIGFTDFVHAMMSVM 176

Query: 247 VFMAIALSDHRITNCLFPGHVEDMDQVMESFPLMVGIICSGLFLVFPTTRYGIGCMA 77
           VFMAIALSDHR+T+CLFP HV++MD+VMESFPLMVG+ICSGLFLVFPT+R+GIGCMA
Sbjct: 177 VFMAIALSDHRVTDCLFPRHVKEMDEVMESFPLMVGVICSGLFLVFPTSRHGIGCMA 233


>ref|XP_002278425.1| PREDICTED: uncharacterized protein LOC100243883 [Vitis vinifera]
          Length = 214

 Score =  291 bits (745), Expect = 6e-77
 Identities = 137/177 (77%), Positives = 156/177 (88%)
 Frame = -2

Query: 607 RRAVANGVQKTLSKTSMLANFLPTGTLLTFSMVLPSVSADGNCSPVNTMMIYVLIGLCSL 428
           RRAVA GVQKTLSKTSML NFLPTGTLLTF MVLPS+  +G CS V+ +MI++L+GLC L
Sbjct: 37  RRAVAKGVQKTLSKTSMLVNFLPTGTLLTFEMVLPSIYRNGECSSVSILMIHMLLGLCCL 96

Query: 427 SCFFFHFTDSFKDPEGKVYYGFVTPRGLAVFKSGLGVEIPKDERYKLGFHDLLHALMSVM 248
           SCFFFHFTD F+ P+GKVYYGFVT +GLAVFK GL VE+PKDER+K+G  D +HA MSVM
Sbjct: 97  SCFFFHFTDGFRGPDGKVYYGFVTTKGLAVFKPGLEVEVPKDERFKVGLTDFVHATMSVM 156

Query: 247 VFMAIALSDHRITNCLFPGHVEDMDQVMESFPLMVGIICSGLFLVFPTTRYGIGCMA 77
           VF+AIA SDHRIT+CLFPGH +DMD+VMESFPLMVGI+CSGLFLVFP TRYGIGCMA
Sbjct: 157 VFIAIAFSDHRITDCLFPGHEKDMDEVMESFPLMVGIVCSGLFLVFPNTRYGIGCMA 213


>ref|XP_004146729.1| PREDICTED: uncharacterized protein LOC101222659 [Cucumis sativus]
           gi|449525279|ref|XP_004169645.1| PREDICTED:
           uncharacterized protein LOC101228440 [Cucumis sativus]
          Length = 214

 Score =  285 bits (729), Expect = 4e-75
 Identities = 137/178 (76%), Positives = 155/178 (87%), Gaps = 1/178 (0%)
 Frame = -2

Query: 607 RRAVANGVQKTLSKTSMLANFLPTGTLLTFSMVLPSVSADGNCSPVNTMMIYVLIGLCSL 428
           RRA+A G+QKTLSKTSML NFLPTGTLLTF M+LPSVS  G C+ VNTMMI  L+GLC+L
Sbjct: 36  RRAMAKGMQKTLSKTSMLVNFLPTGTLLTFEMLLPSVSGKGECTHVNTMMINFLLGLCAL 95

Query: 427 SCFFFHFTDSFKDPEGKVYYGFVTPRGLAVFKSGL-GVEIPKDERYKLGFHDLLHALMSV 251
           SCF FHFTDSFK  +GKVYYG VTPRGLAVFK+G+  VE+PK+ER+K+G  D +HA+MSV
Sbjct: 96  SCFLFHFTDSFKGVDGKVYYGIVTPRGLAVFKTGVREVEVPKEERFKVGITDFVHAIMSV 155

Query: 250 MVFMAIALSDHRITNCLFPGHVEDMDQVMESFPLMVGIICSGLFLVFPTTRYGIGCMA 77
           MVFMAIA SDHR+TNCLFPGHV DM++VMESFPLMVG ICS LFLVFP TRYGIGCMA
Sbjct: 156 MVFMAIAFSDHRVTNCLFPGHVADMEEVMESFPLMVGTICSALFLVFPNTRYGIGCMA 213


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