BLASTX nr result

ID: Coptis24_contig00025590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025590
         (826 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18349.3| unnamed protein product [Vitis vinifera]              397   e-108
ref|XP_002267070.1| PREDICTED: uncharacterized protein LOC100245...   397   e-108
emb|CAN74345.1| hypothetical protein VITISV_005477 [Vitis vinifera]   397   e-108
ref|XP_002509825.1| nucleoside-triphosphatase, putative [Ricinus...   384   e-104
ref|XP_002303599.1| tir-nbs resistance protein [Populus trichoca...   383   e-104

>emb|CBI18349.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  397 bits (1021), Expect = e-108
 Identities = 199/281 (70%), Positives = 237/281 (84%), Gaps = 7/281 (2%)
 Frame = +3

Query: 3    KREVSELELMLFGSVSGEAEKEYFELKTRHRRKNVVLGWN------ENKRDRQTESSSSK 164
            K+E+SELE +LFG VSGE+EK+YFELK R RRKN+ +GW+      E +R++  ES   K
Sbjct: 361  KKELSELEFILFGDVSGESEKDYFELKARPRRKNLTIGWSKGSSVEERRREQHMESGHRK 420

Query: 165  GKEPVIWKESEREIEMQRLEIPHGEYKALGSKNAGRCRRRKRYVKILYGKGIACVSGDSG 344
            GK+ V+WKESE+EIEMQ  E+P  +Y +L SKN G+  R +R  KILYGKGIACVSG+SG
Sbjct: 421  GKQAVVWKESEKEIEMQSSELPQRQY-SLRSKNGGKYGRSRRSAKILYGKGIACVSGESG 479

Query: 345  IGKTDLILEFAYRFFKRYKMVLWIGGESRYIRQNYLNLWSFLEVDVGIENQYLDRGKTKS 524
            IGKTDL+LEFAYR+ +RYKMVLW+GG SRYIRQNYLNLWSFLEVDVGIEN   ++ + KS
Sbjct: 480  IGKTDLLLEFAYRYHQRYKMVLWVGGGSRYIRQNYLNLWSFLEVDVGIEN-CSEKSRIKS 538

Query: 525  FEEQEEAAISRVRKEFMRDIPFLVVIDNLESEKDWWDKKILMDLLPRFGGETHFIISTRL 704
            FEE EEAAISRVRKE MR+IPFLVV+DNLESEKDWWD+K++MDLLPRFGG+THFIISTRL
Sbjct: 539  FEEHEEAAISRVRKELMRNIPFLVVLDNLESEKDWWDQKLIMDLLPRFGGDTHFIISTRL 598

Query: 705  PRIMNLESLKLSYLSGVEAMTLMKGT-REYPIAEIDALAAI 824
            PRIMNLE LKLSYLSGVEAM+LM+G+ ++YPI EIDAL  I
Sbjct: 599  PRIMNLEPLKLSYLSGVEAMSLMQGSVKDYPIVEIDALRVI 639


>ref|XP_002267070.1| PREDICTED: uncharacterized protein LOC100245966 [Vitis vinifera]
          Length = 1009

 Score =  397 bits (1021), Expect = e-108
 Identities = 199/281 (70%), Positives = 237/281 (84%), Gaps = 7/281 (2%)
 Frame = +3

Query: 3    KREVSELELMLFGSVSGEAEKEYFELKTRHRRKNVVLGWN------ENKRDRQTESSSSK 164
            K+E+SELE +LFG VSGE+EK+YFELK R RRKN+ +GW+      E +R++  ES   K
Sbjct: 369  KKELSELEFILFGDVSGESEKDYFELKARPRRKNLTIGWSKGSSVEERRREQHMESGHRK 428

Query: 165  GKEPVIWKESEREIEMQRLEIPHGEYKALGSKNAGRCRRRKRYVKILYGKGIACVSGDSG 344
            GK+ V+WKESE+EIEMQ  E+P  +Y +L SKN G+  R +R  KILYGKGIACVSG+SG
Sbjct: 429  GKQAVVWKESEKEIEMQSSELPQRQY-SLRSKNGGKYGRSRRSAKILYGKGIACVSGESG 487

Query: 345  IGKTDLILEFAYRFFKRYKMVLWIGGESRYIRQNYLNLWSFLEVDVGIENQYLDRGKTKS 524
            IGKTDL+LEFAYR+ +RYKMVLW+GG SRYIRQNYLNLWSFLEVDVGIEN   ++ + KS
Sbjct: 488  IGKTDLLLEFAYRYHQRYKMVLWVGGGSRYIRQNYLNLWSFLEVDVGIEN-CSEKSRIKS 546

Query: 525  FEEQEEAAISRVRKEFMRDIPFLVVIDNLESEKDWWDKKILMDLLPRFGGETHFIISTRL 704
            FEE EEAAISRVRKE MR+IPFLVV+DNLESEKDWWD+K++MDLLPRFGG+THFIISTRL
Sbjct: 547  FEEHEEAAISRVRKELMRNIPFLVVLDNLESEKDWWDQKLIMDLLPRFGGDTHFIISTRL 606

Query: 705  PRIMNLESLKLSYLSGVEAMTLMKGT-REYPIAEIDALAAI 824
            PRIMNLE LKLSYLSGVEAM+LM+G+ ++YPI EIDAL  I
Sbjct: 607  PRIMNLEPLKLSYLSGVEAMSLMQGSVKDYPIVEIDALRVI 647


>emb|CAN74345.1| hypothetical protein VITISV_005477 [Vitis vinifera]
          Length = 1011

 Score =  397 bits (1021), Expect = e-108
 Identities = 199/281 (70%), Positives = 237/281 (84%), Gaps = 7/281 (2%)
 Frame = +3

Query: 3    KREVSELELMLFGSVSGEAEKEYFELKTRHRRKNVVLGWN------ENKRDRQTESSSSK 164
            K+E+SELE +LFG VSGE+EK+YFELK R RRKN+ +GW+      E +R++  ES   K
Sbjct: 371  KKELSELEFILFGDVSGESEKDYFELKARPRRKNLTIGWSKGSSVEERRREQHMESGHRK 430

Query: 165  GKEPVIWKESEREIEMQRLEIPHGEYKALGSKNAGRCRRRKRYVKILYGKGIACVSGDSG 344
            GK+ V+WKESE+EIEMQ  E+P  +Y +L SKN G+  R +R  KILYGKGIACVSG+SG
Sbjct: 431  GKQAVVWKESEKEIEMQSSELPQRQY-SLRSKNGGKYGRSRRSAKILYGKGIACVSGESG 489

Query: 345  IGKTDLILEFAYRFFKRYKMVLWIGGESRYIRQNYLNLWSFLEVDVGIENQYLDRGKTKS 524
            IGKTDL+LEFAYR+ +RYKMVLW+GG SRYIRQNYLNLWSFLEVDVGIEN   ++ + KS
Sbjct: 490  IGKTDLLLEFAYRYHQRYKMVLWVGGGSRYIRQNYLNLWSFLEVDVGIEN-CSEKSRIKS 548

Query: 525  FEEQEEAAISRVRKEFMRDIPFLVVIDNLESEKDWWDKKILMDLLPRFGGETHFIISTRL 704
            FEE EEAAISRVRKE MR+IPFLVV+DNLESEKDWWD+K++MDLLPRFGG+THFIISTRL
Sbjct: 549  FEEHEEAAISRVRKELMRNIPFLVVLDNLESEKDWWDQKLIMDLLPRFGGDTHFIISTRL 608

Query: 705  PRIMNLESLKLSYLSGVEAMTLMKGT-REYPIAEIDALAAI 824
            PRIMNLE LKLSYLSGVEAM+LM+G+ ++YPI EIDAL  I
Sbjct: 609  PRIMNLEPLKLSYLSGVEAMSLMQGSVKDYPIVEIDALRVI 649


>ref|XP_002509825.1| nucleoside-triphosphatase, putative [Ricinus communis]
            gi|223549724|gb|EEF51212.1| nucleoside-triphosphatase,
            putative [Ricinus communis]
          Length = 999

 Score =  384 bits (986), Expect = e-104
 Identities = 191/281 (67%), Positives = 235/281 (83%), Gaps = 7/281 (2%)
 Frame = +3

Query: 3    KREVSELELMLFGSVSGEAEKEYFELKTRHRRKNVVLGWN------ENKRDRQTESSSSK 164
            K+E+SELE +LFG VSG++E++YFELKT+ RRKN+ +GW+      E +RD + E+ + K
Sbjct: 359  KKELSELEFILFGDVSGDSERDYFELKTKPRRKNLTIGWSKSSSMEEKRRDWKWENRAKK 418

Query: 165  GKEPVIWKESEREIEMQRLEIPHGEYKALGSKNAGRCRRRKRYVKILYGKGIACVSGDSG 344
            GKEPV+WKESE+EIEMQ  EIPH ++ A  +K A R  +RKR  KI+YGKG+ACVSG+SG
Sbjct: 419  GKEPVVWKESEKEIEMQSTEIPHRQHHAR-TKGARRYAKRKRSTKIVYGKGVACVSGESG 477

Query: 345  IGKTDLILEFAYRFFKRYKMVLWIGGESRYIRQNYLNLWSFLEVDVGIENQYLDRGKTKS 524
            IGKT+L+LEFAYR+ +RYKMVLWIGGESRYIR NYLNLWSFLEVDVG++N    + + ++
Sbjct: 478  IGKTELLLEFAYRYHQRYKMVLWIGGESRYIRHNYLNLWSFLEVDVGVQN-CPGKSRIRN 536

Query: 525  FEEQEEAAISRVRKEFMRDIPFLVVIDNLESEKDWWDKKILMDLLPRFGGETHFIISTRL 704
            FEEQEE AISRVRKE MR+IPFLVVIDNLESEKDWWD K++MDLLPRFGGETH IISTRL
Sbjct: 537  FEEQEEEAISRVRKELMRNIPFLVVIDNLESEKDWWDHKLVMDLLPRFGGETHIIISTRL 596

Query: 705  PRIMNLESLKLSYLSGVEAMTLMKGT-REYPIAEIDALAAI 824
            PR+MNLE LKLSYLSGVEA  +M+G+ ++Y IAEI+AL  I
Sbjct: 597  PRVMNLEPLKLSYLSGVEATCIMQGSGKDYSIAEIEALRVI 637


>ref|XP_002303599.1| tir-nbs resistance protein [Populus trichocarpa]
            gi|222841031|gb|EEE78578.1| tir-nbs resistance protein
            [Populus trichocarpa]
          Length = 1005

 Score =  383 bits (983), Expect = e-104
 Identities = 193/281 (68%), Positives = 235/281 (83%), Gaps = 7/281 (2%)
 Frame = +3

Query: 3    KREVSELELMLFGSVSGEAEKEYFELKTRHRRKNVVLGWNEN------KRDRQTESSSSK 164
            K+E+SELE +LFG VSG +E++YFELK R RRKN+ +GWN+N      +R++Q ++SS K
Sbjct: 365  KKELSELEFILFGDVSGNSERDYFELKARPRRKNLTVGWNKNSSVEEKRREQQGDNSSEK 424

Query: 165  GKEPVIWKESEREIEMQRLEIPHGEYKALGSKNAGRCRRRKRYVKILYGKGIACVSGDSG 344
            GKEPV+WKESEREIEMQ  +    ++  +  K++GR  +RKR  KILYGKGIACVSG+SG
Sbjct: 425  GKEPVVWKESEREIEMQSGDFSQRQH-LVKPKSSGRYGKRKRSTKILYGKGIACVSGESG 483

Query: 345  IGKTDLILEFAYRFFKRYKMVLWIGGESRYIRQNYLNLWSFLEVDVGIENQYLDRGKTKS 524
            IGKT+L+LEFAYR+ +RYKMVLWIGGESRYIRQNYLNL SFL+VD+G+EN Y  + + +S
Sbjct: 484  IGKTELLLEFAYRYHQRYKMVLWIGGESRYIRQNYLNLRSFLDVDIGVEN-YSGKSRIRS 542

Query: 525  FEEQEEAAISRVRKEFMRDIPFLVVIDNLESEKDWWDKKILMDLLPRFGGETHFIISTRL 704
            FEEQEE AIS+VRKE +R+IPFLVVIDNLESEKDWWD KI+MDLLPRFGGETH IISTRL
Sbjct: 543  FEEQEEEAISKVRKELLRNIPFLVVIDNLESEKDWWDHKIVMDLLPRFGGETHIIISTRL 602

Query: 705  PRIMNLESLKLSYLSGVEAMTLMKGT-REYPIAEIDALAAI 824
            PR+MNLE LKLSYLS VEAM LM+G+ ++Y IAEIDAL  I
Sbjct: 603  PRVMNLEPLKLSYLSAVEAMCLMQGSDKDYSIAEIDALRVI 643


Top