BLASTX nr result

ID: Coptis24_contig00025570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025570
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitoch...   151   6e-35
ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2, chlorop...   150   8e-35
ref|XP_003520424.1| PREDICTED: glycyl-tRNA synthetase 2, chlorop...   142   4e-32
ref|XP_004170547.1| PREDICTED: glycine--tRNA ligase 2, chloropla...   140   1e-31
ref|XP_004140508.1| PREDICTED: glycine--tRNA ligase 2, chloropla...   140   1e-31

>ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor,
           putative [Ricinus communis] gi|223548759|gb|EEF50248.1|
           Glycyl-tRNA synthetase 2, chloroplast/mitochondrial
           precursor, putative [Ricinus communis]
          Length = 1069

 Score =  151 bits (381), Expect = 6e-35
 Identities = 81/118 (68%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
 Frame = -1

Query: 353 SLARQCAQLWVKTRESLGHPLGISYEPNHLVS-KEVTRPATREGSEVPRLFVLEVGTEEM 177
           SLARQCAQLW+KTRESLGHPLG   E  HL S +EV   A ++  + PR FVLE+GTEEM
Sbjct: 338 SLARQCAQLWLKTRESLGHPLGTVSETVHLASAEEVLDAAVKKVHDGPRSFVLEIGTEEM 397

Query: 176 PPQDVISASQQLKESITQLLEKQRLVHGEVFASGTPRRLVVLVEGLFSKQTETETEVR 3
           PPQDV+ ASQQLK+ + QLLEKQRL HGEV A GTPRRLVV VE L +KQ E E EVR
Sbjct: 398 PPQDVVHASQQLKDLVVQLLEKQRLRHGEVQAFGTPRRLVVCVESLSAKQPEIEVEVR 455


>ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2,
           chloroplastic/mitochondrial-like [Vitis vinifera]
           gi|297734621|emb|CBI16672.3| unnamed protein product
           [Vitis vinifera]
          Length = 1071

 Score =  150 bits (380), Expect = 8e-35
 Identities = 80/118 (67%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
 Frame = -1

Query: 353 SLARQCAQLWVKTRESLGHPLGISYEPNHLVS-KEVTRPATREGSEVPRLFVLEVGTEEM 177
           SLARQCAQLW+KTRESLGHPLG   EP+ LV  KE+   A +   E PRLF+LE+GTEE+
Sbjct: 340 SLARQCAQLWLKTRESLGHPLGTISEPDQLVCPKEILEAAVQRVHEDPRLFLLEIGTEEL 399

Query: 176 PPQDVISASQQLKESITQLLEKQRLVHGEVFASGTPRRLVVLVEGLFSKQTETETEVR 3
           PPQDV SASQQLK+ I QLL+KQRL H EV A GTPRRLVV V+ L +KQ E E EVR
Sbjct: 400 PPQDVASASQQLKDLIMQLLDKQRLGHSEVQAFGTPRRLVVCVKNLSTKQAENEVEVR 457


>ref|XP_003520424.1| PREDICTED: glycyl-tRNA synthetase 2,
           chloroplastic/mitochondrial-like [Glycine max]
          Length = 1074

 Score =  142 bits (357), Expect = 4e-32
 Identities = 76/118 (64%), Positives = 87/118 (73%), Gaps = 1/118 (0%)
 Frame = -1

Query: 353 SLARQCAQLWVKTRESLGHPLGISYEPNHLV-SKEVTRPATREGSEVPRLFVLEVGTEEM 177
           SLARQCAQLW+KTRE L  PLG   EP+H V  KEV   A  +  +  R FVLE+GTEEM
Sbjct: 343 SLARQCAQLWLKTREMLDFPLGFISEPDHFVLPKEVLEAACEKVHDHSRAFVLEIGTEEM 402

Query: 176 PPQDVISASQQLKESITQLLEKQRLVHGEVFASGTPRRLVVLVEGLFSKQTETETEVR 3
           PPQDV+ AS+QLK+ + QLLE+QRL HGEV A GTPRRLVV VE L +KQ E E EVR
Sbjct: 403 PPQDVVDASKQLKDLLLQLLERQRLNHGEVQAFGTPRRLVVAVENLCTKQAEKEVEVR 460


>ref|XP_004170547.1| PREDICTED: glycine--tRNA ligase 2,
           chloroplastic/mitochondrial-like, partial [Cucumis
           sativus]
          Length = 385

 Score =  140 bits (352), Expect = 1e-31
 Identities = 76/118 (64%), Positives = 88/118 (74%), Gaps = 1/118 (0%)
 Frame = -1

Query: 353 SLARQCAQLWVKTRESLGHPLGISYEPNHLVS-KEVTRPATREGSEVPRLFVLEVGTEEM 177
           SLARQCAQLW+KTRESLGHPLG++ +P  LV  KE+   A ++  E  R FV E+GTEE+
Sbjct: 188 SLARQCAQLWLKTRESLGHPLGVASDPVDLVCPKELLDAAIKKVHEDVRWFVFEIGTEEI 247

Query: 176 PPQDVISASQQLKESITQLLEKQRLVHGEVFASGTPRRLVVLVEGLFSKQTETETEVR 3
           PP+DV+ ASQQLK  + QLLEK RL HG V A GTPRRLVV VE L SKQ E E EVR
Sbjct: 248 PPKDVVDASQQLKTYMLQLLEKHRLSHGNVQAFGTPRRLVVKVESLCSKQVEKEFEVR 305


>ref|XP_004140508.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
           [Cucumis sativus]
          Length = 1068

 Score =  140 bits (352), Expect = 1e-31
 Identities = 76/118 (64%), Positives = 88/118 (74%), Gaps = 1/118 (0%)
 Frame = -1

Query: 353 SLARQCAQLWVKTRESLGHPLGISYEPNHLVS-KEVTRPATREGSEVPRLFVLEVGTEEM 177
           SLARQCAQLW+KTRESLGHPLG++ +P  LV  KE+   A ++  E  R FV E+GTEE+
Sbjct: 337 SLARQCAQLWLKTRESLGHPLGVASDPVDLVCPKELLDAAIKKVHEDVRWFVFEIGTEEI 396

Query: 176 PPQDVISASQQLKESITQLLEKQRLVHGEVFASGTPRRLVVLVEGLFSKQTETETEVR 3
           PP+DV+ ASQQLK  + QLLEK RL HG V A GTPRRLVV VE L SKQ E E EVR
Sbjct: 397 PPKDVVDASQQLKTYMLQLLEKHRLSHGNVQAFGTPRRLVVKVESLCSKQVEKEFEVR 454


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