BLASTX nr result

ID: Coptis24_contig00025566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025566
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004563877.1| photosystem I subunit VIII [Nelumbo lutea] g...    71   1e-10
gb|ADD30691.1| photosystem I subunit VIII protein [Antirrhinum m...    70   2e-10
ref|YP_001004196.1| photosystem I subunit VIII [Ranunculus macra...    70   2e-10
ref|YP_004935676.1| psaI gene product (chloroplast) [Sesamum ind...    69   3e-10
gb|AFA27253.1| photosystem I subunit VIII, partial [Belosynapsis...    69   5e-10

>ref|YP_004563877.1| photosystem I subunit VIII [Nelumbo lutea]
           gi|334362059|ref|YP_004564113.1| photosystem I subunit
           VIII [Nelumbo nucifera] gi|224474144|gb|ACN49333.1|
           photosystem I subunit VIII [Nelumbo lutea]
           gi|224474232|gb|ACN49418.1| photosystem I subunit VIII
           [Nelumbo nucifera] gi|290488628|gb|ADD30698.1|
           photosystem I subunit VIII protein [Nelumbo nucifera]
           gi|383286807|gb|AFH01457.1| photosystem I subunit VIII
           (chloroplast) [Nelumbo nucifera]
           gi|383286902|gb|AFH01551.1| photosystem I subunit VIII
           (chloroplast) [Nelumbo lutea]
          Length = 36

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/36 (94%), Positives = 35/36 (97%)
 Frame = -2

Query: 303 MTTFNLPSFFVPLVGLVFPALAMASLFLHVQKNKIV 196
           MTTFNLPS FVPLVGLVFPA+AMASLFLHVQKNKIV
Sbjct: 1   MTTFNLPSIFVPLVGLVFPAIAMASLFLHVQKNKIV 36


>gb|ADD30691.1| photosystem I subunit VIII protein [Antirrhinum majus]
          Length = 36

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/36 (94%), Positives = 34/36 (94%)
 Frame = -2

Query: 303 MTTFNLPSFFVPLVGLVFPALAMASLFLHVQKNKIV 196
           MTTFN PS FVPLVGLVFPALAMASLFLHVQKNKIV
Sbjct: 1   MTTFNFPSIFVPLVGLVFPALAMASLFLHVQKNKIV 36


>ref|YP_001004196.1| photosystem I subunit VIII [Ranunculus macranthus]
           gi|229577764|ref|YP_002836100.1| photosystem I subunit
           VIII [Megaleranthis saniculifolia]
           gi|69217689|gb|AAZ04102.1| photosystem I subunit VIII
           [Ranunculus macranthus] gi|85540814|gb|ABC70766.1|
           photosystem I subunit VIII [Ranunculus macranthus]
           gi|226933892|gb|ACO92025.1| photosystem I subunit VIII
           [Megaleranthis saniculifolia]
          Length = 36

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/36 (94%), Positives = 35/36 (97%)
 Frame = -2

Query: 303 MTTFNLPSFFVPLVGLVFPALAMASLFLHVQKNKIV 196
           MTTFNLPSFFVPLVGLVFPA+AMASL LHVQKNKIV
Sbjct: 1   MTTFNLPSFFVPLVGLVFPAIAMASLSLHVQKNKIV 36


>ref|YP_004935676.1| psaI gene product (chloroplast) [Sesamum indicum]
           gi|442742973|ref|YP_007353925.1| photosystem I subunit
           VIII (chloroplast) [Tectona grandis]
           gi|110456614|gb|ABG74741.1| PSI reaction center subunit
           VIII [Forsythia europaea] gi|347448305|gb|AEO92716.1|
           PSI reaction center subunit VIII (chloroplast) [Sesamum
           indicum] gi|438687614|emb|CCP47140.1| photosystem I
           subunit VIII (chloroplast) [Tectona grandis]
           gi|438688298|emb|CCP47229.1| photosystem I subunit VIII
           (chloroplast) [Tectona grandis]
           gi|438688422|emb|CCP47318.1| photosystem I subunit VIII
           (chloroplast) [Tectona grandis]
          Length = 36

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/36 (91%), Positives = 34/36 (94%)
 Frame = -2

Query: 303 MTTFNLPSFFVPLVGLVFPALAMASLFLHVQKNKIV 196
           MTTFN PS FVPLVGLVFPA+AMASLFLHVQKNKIV
Sbjct: 1   MTTFNFPSIFVPLVGLVFPAIAMASLFLHVQKNKIV 36


>gb|AFA27253.1| photosystem I subunit VIII, partial [Belosynapsis ciliata]
          Length = 36

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = -2

Query: 303 MTTFNLPSFFVPLVGLVFPALAMASLFLHVQKNKIV 196
           MT FNLPSFFVPLVGLVFPA+AMASLFL+VQKNKIV
Sbjct: 1   MTDFNLPSFFVPLVGLVFPAIAMASLFLYVQKNKIV 36


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