BLASTX nr result

ID: Coptis24_contig00025564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025564
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_181224.1| xyloglucan:xyloglucosyl transferase [Arabidopsi...    71   8e-11
ref|XP_002881475.1| hypothetical protein ARALYDRAFT_482667 [Arab...    71   8e-11
ref|XP_002323501.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
gb|ACD03222.1| xyloglucan endotransglucosylase/hydrolase 12 [Act...    68   9e-10
ref|XP_002519471.1| Xyloglucan endotransglucosylase/hydrolase pr...    66   3e-09

>ref|NP_181224.1| xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana]
           gi|38605514|sp|Q9SJL9.1|XTH32_ARATH RecName:
           Full=Probable xyloglucan endotransglucosylase/hydrolase
           protein 32; Short=At-XTH32; Short=XTH-32; Flags:
           Precursor gi|4883603|gb|AAD31572.1| xyloglucan
           endotransglycosylase, putative [Arabidopsis thaliana]
           gi|15027967|gb|AAK76514.1| putative xyloglucan
           endo-transglycosylase [Arabidopsis thaliana]
           gi|21595304|gb|AAM66089.1| putative xyloglucan
           endo-transglycosylase [Arabidopsis thaliana]
           gi|22136872|gb|AAM91780.1| putative xyloglucan
           endo-transglycosylase [Arabidopsis thaliana]
           gi|330254214|gb|AEC09308.1| xyloglucan:xyloglucosyl
           transferase [Arabidopsis thaliana]
          Length = 299

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 26/36 (72%), Positives = 33/36 (91%)
 Frame = -3

Query: 399 SKQQYAAMRWAQTHYLVYNYCRDYKRDHSVTPECWK 292
           ++QQ+ AMRW QTH +VYNYC+DYKRDHS+TPECW+
Sbjct: 264 TRQQHQAMRWVQTHSMVYNYCKDYKRDHSLTPECWR 299


>ref|XP_002881475.1| hypothetical protein ARALYDRAFT_482667 [Arabidopsis lyrata subsp.
           lyrata] gi|297327314|gb|EFH57734.1| hypothetical protein
           ARALYDRAFT_482667 [Arabidopsis lyrata subsp. lyrata]
          Length = 299

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 26/36 (72%), Positives = 33/36 (91%)
 Frame = -3

Query: 399 SKQQYAAMRWAQTHYLVYNYCRDYKRDHSVTPECWK 292
           ++QQ+ AMRW QTH +VYNYC+DYKRDHS+TPECW+
Sbjct: 264 TRQQHQAMRWVQTHSMVYNYCKDYKRDHSLTPECWR 299


>ref|XP_002323501.1| predicted protein [Populus trichocarpa] gi|222868131|gb|EEF05262.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 24/35 (68%), Positives = 32/35 (91%)
 Frame = -3

Query: 399 SKQQYAAMRWAQTHYLVYNYCRDYKRDHSVTPECW 295
           ++QQY +MRW Q H++VY+YC+DYKRDHS+TPECW
Sbjct: 259 TRQQYRSMRWVQRHHMVYDYCKDYKRDHSLTPECW 293


>gb|ACD03222.1| xyloglucan endotransglucosylase/hydrolase 12 [Actinidia eriantha]
          Length = 294

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = -3

Query: 399 SKQQYAAMRWAQTHYLVYNYCRDYKRDHSVTPECW 295
           S +QY AMRW Q+H+LVY+YCRD KRDHS+TPECW
Sbjct: 259 STRQYMAMRWVQSHFLVYDYCRDSKRDHSLTPECW 293


>ref|XP_002519471.1| Xyloglucan endotransglucosylase/hydrolase protein 14 precursor,
           putative [Ricinus communis] gi|223541334|gb|EEF42885.1|
           Xyloglucan endotransglucosylase/hydrolase protein 14
           precursor, putative [Ricinus communis]
          Length = 296

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = -3

Query: 399 SKQQYAAMRWAQTHYLVYNYCRDYKRDHSVTPECW 295
           ++QQY AMRW QT ++VYNYC D KRDHS+TPECW
Sbjct: 259 TRQQYRAMRWVQTRHMVYNYCMDSKRDHSLTPECW 293


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