BLASTX nr result

ID: Coptis24_contig00025561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025561
         (924 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632166.1| PREDICTED: lysine-specific demethylase 8-lik...   410   e-112
emb|CBI16425.3| unnamed protein product [Vitis vinifera]              410   e-112
ref|XP_002299244.1| predicted protein [Populus trichocarpa] gi|2...   395   e-108
ref|XP_002883269.1| transcription factor jumonji domain-containi...   387   e-105
ref|NP_566667.1| transcription factor jumonji (jmjC) domain-cont...   383   e-104

>ref|XP_003632166.1| PREDICTED: lysine-specific demethylase 8-like [Vitis vinifera]
          Length = 411

 Score =  410 bits (1054), Expect = e-112
 Identities = 189/243 (77%), Positives = 216/243 (88%), Gaps = 1/243 (0%)
 Frame = +1

Query: 43  NEVEV-NALPNRSLSGKVIEKKSSVSLEGFLCDYFLSSTPVIVSDGMSHWPASKKWKDID 219
           +E EV   LP +SLS K+I K+S++SLEGFLCDYF+S +PVI+SD M HWPA  +W D+D
Sbjct: 152 HEAEVLGVLPMKSLSSKIIGKRSALSLEGFLCDYFMSGSPVIISDCMGHWPARTRWNDMD 211

Query: 220 YLKRVAGDRTVPVEVGKNYLCQDWKQELITFSHFLERIQSNELSTTGPTYLAQHPLFEQI 399
           YLKRVAGDRTVPVEVGKNYL  DWKQELITFS FLERIQS++ ++T PTYLAQHPLF+QI
Sbjct: 212 YLKRVAGDRTVPVEVGKNYLSSDWKQELITFSQFLERIQSSDCTSTLPTYLAQHPLFDQI 271

Query: 400 QELRGDILVPDYCFVGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGRKYIRLYSAS 579
            ELR DI +PDYC+ GGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVG+KYIRLY AS
Sbjct: 272 HELRKDIFIPDYCYAGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYPAS 331

Query: 580 ISEDLYPFTESMLCNSSQVDLDNLDTKEFPNAKDLDFVDCILEEGQMLYIPPKWWHYVRS 759
           +SE+LYP+TE+MLCNSS+VDLDN+D KEFP  KDL+F DCILEEG+MLYIPPKWWHYVRS
Sbjct: 332 LSEELYPYTETMLCNSSKVDLDNIDEKEFPKVKDLEFQDCILEEGEMLYIPPKWWHYVRS 391

Query: 760 LTT 768
           LTT
Sbjct: 392 LTT 394


>emb|CBI16425.3| unnamed protein product [Vitis vinifera]
          Length = 418

 Score =  410 bits (1054), Expect = e-112
 Identities = 189/243 (77%), Positives = 216/243 (88%), Gaps = 1/243 (0%)
 Frame = +1

Query: 43  NEVEV-NALPNRSLSGKVIEKKSSVSLEGFLCDYFLSSTPVIVSDGMSHWPASKKWKDID 219
           +E EV   LP +SLS K+I K+S++SLEGFLCDYF+S +PVI+SD M HWPA  +W D+D
Sbjct: 47  HEAEVLGVLPMKSLSSKIIGKRSALSLEGFLCDYFMSGSPVIISDCMGHWPARTRWNDMD 106

Query: 220 YLKRVAGDRTVPVEVGKNYLCQDWKQELITFSHFLERIQSNELSTTGPTYLAQHPLFEQI 399
           YLKRVAGDRTVPVEVGKNYL  DWKQELITFS FLERIQS++ ++T PTYLAQHPLF+QI
Sbjct: 107 YLKRVAGDRTVPVEVGKNYLSSDWKQELITFSQFLERIQSSDCTSTLPTYLAQHPLFDQI 166

Query: 400 QELRGDILVPDYCFVGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGRKYIRLYSAS 579
            ELR DI +PDYC+ GGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVG+KYIRLY AS
Sbjct: 167 HELRKDIFIPDYCYAGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYPAS 226

Query: 580 ISEDLYPFTESMLCNSSQVDLDNLDTKEFPNAKDLDFVDCILEEGQMLYIPPKWWHYVRS 759
           +SE+LYP+TE+MLCNSS+VDLDN+D KEFP  KDL+F DCILEEG+MLYIPPKWWHYVRS
Sbjct: 227 LSEELYPYTETMLCNSSKVDLDNIDEKEFPKVKDLEFQDCILEEGEMLYIPPKWWHYVRS 286

Query: 760 LTT 768
           LTT
Sbjct: 287 LTT 289


>ref|XP_002299244.1| predicted protein [Populus trichocarpa] gi|222846502|gb|EEE84049.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  395 bits (1015), Expect = e-108
 Identities = 179/240 (74%), Positives = 210/240 (87%)
 Frame = +1

Query: 46  EVEVNALPNRSLSGKVIEKKSSVSLEGFLCDYFLSSTPVIVSDGMSHWPASKKWKDIDYL 225
           E  +  LP +SLS K++ KKS +SLEGFL ++FLS +PVI+SD M+HWPA  KW D+DYL
Sbjct: 156 EEVLRVLPEKSLSSKIVVKKSGLSLEGFLREHFLSGSPVIISDCMAHWPARTKWNDMDYL 215

Query: 226 KRVAGDRTVPVEVGKNYLCQDWKQELITFSHFLERIQSNELSTTGPTYLAQHPLFEQIQE 405
           KRVAGDRTVPVEVGKNYLCQ+WKQELITFS FLE+IQSN+ S+  PTYLAQH LF+QI E
Sbjct: 216 KRVAGDRTVPVEVGKNYLCQEWKQELITFSEFLEKIQSNDSSSAVPTYLAQHQLFDQINE 275

Query: 406 LRGDILVPDYCFVGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGRKYIRLYSASIS 585
           LR DI +PDYC  GGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVG+KY+RLY++S+S
Sbjct: 276 LRKDICIPDYCCAGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYVRLYTSSVS 335

Query: 586 EDLYPFTESMLCNSSQVDLDNLDTKEFPNAKDLDFVDCILEEGQMLYIPPKWWHYVRSLT 765
           E+LYP+ E+MLCNSSQVDLDN+D  ++P   DL+F+DCILEEG+MLYIPPKWWHYVRSLT
Sbjct: 336 EELYPYNETMLCNSSQVDLDNIDDGQYPKVHDLEFLDCILEEGEMLYIPPKWWHYVRSLT 395


>ref|XP_002883269.1| transcription factor jumonji domain-containing protein [Arabidopsis
           lyrata subsp. lyrata] gi|297329109|gb|EFH59528.1|
           transcription factor jumonji domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 429

 Score =  387 bits (993), Expect = e-105
 Identities = 174/234 (74%), Positives = 206/234 (88%)
 Frame = +1

Query: 64  LPNRSLSGKVIEKKSSVSLEGFLCDYFLSSTPVIVSDGMSHWPASKKWKDIDYLKRVAGD 243
           LP RSL+ + +EK+S +SLEGFL DYFLS TPV++++ M+HWPA  KW  +DYL  VAG+
Sbjct: 178 LPCRSLTCRRVEKRSGLSLEGFLRDYFLSGTPVVITNSMAHWPARTKWNHLDYLNAVAGN 237

Query: 244 RTVPVEVGKNYLCQDWKQELITFSHFLERIQSNELSTTGPTYLAQHPLFEQIQELRGDIL 423
           RTVPVEVGKNYLC DWKQEL+TFS FLERI++N+ S   PTYLAQHPLF+QI ELR DI 
Sbjct: 238 RTVPVEVGKNYLCSDWKQELVTFSKFLERIRTNKSSPMEPTYLAQHPLFDQINELRDDIC 297

Query: 424 VPDYCFVGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGRKYIRLYSASISEDLYPF 603
           +PDYCFVGGGEL+SLNAWFGPAGTVTPLHHDPHHNILAQVVG+KYIRLY +S+ ++LYP+
Sbjct: 298 IPDYCFVGGGELQSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYPSSLQDELYPY 357

Query: 604 TESMLCNSSQVDLDNLDTKEFPNAKDLDFVDCILEEGQMLYIPPKWWHYVRSLT 765
           +E+MLCNSSQVDLDN+D  EFP A +L+F+DCILEEG+MLYIPPKWWHYVRSLT
Sbjct: 358 SETMLCNSSQVDLDNIDKTEFPKATELEFMDCILEEGEMLYIPPKWWHYVRSLT 411


>ref|NP_566667.1| transcription factor jumonji (jmjC) domain-containing protein
           [Arabidopsis thaliana] gi|9294408|dbj|BAB02489.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|21536708|gb|AAM61040.1| unknown [Arabidopsis
           thaliana] gi|332642905|gb|AEE76426.1| transcription
           factor jumonji (jmjC) domain-containing protein
           [Arabidopsis thaliana]
          Length = 418

 Score =  383 bits (983), Expect = e-104
 Identities = 175/247 (70%), Positives = 210/247 (85%)
 Frame = +1

Query: 25  EIECCSNEVEVNALPNRSLSGKVIEKKSSVSLEGFLCDYFLSSTPVIVSDGMSHWPASKK 204
           E+    NEV +  LP RSL+ K +EK+S +SLEGFL DY+L  TPV++++ M+HWPA  K
Sbjct: 155 EVPVDVNEV-LKILPCRSLTCKRVEKRSGLSLEGFLRDYYLPGTPVVITNSMAHWPARTK 213

Query: 205 WKDIDYLKRVAGDRTVPVEVGKNYLCQDWKQELITFSHFLERIQSNELSTTGPTYLAQHP 384
           W  +DYL  VAG+RTVPVEVGKNYLC DWKQEL+TFS FLER+++N+ S   PTYLAQHP
Sbjct: 214 WNHLDYLNAVAGNRTVPVEVGKNYLCSDWKQELVTFSKFLERMRTNKSSPMEPTYLAQHP 273

Query: 385 LFEQIQELRGDILVPDYCFVGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGRKYIR 564
           LF+QI ELR DI +PDYCFVGGGEL+SLNAWFGPAGTVTPLHHDPHHNILAQVVG+KYIR
Sbjct: 274 LFDQINELRDDICIPDYCFVGGGELQSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYIR 333

Query: 565 LYSASISEDLYPFTESMLCNSSQVDLDNLDTKEFPNAKDLDFVDCILEEGQMLYIPPKWW 744
           LY + + ++LYP++E+MLCNSSQVDLDN+D  EFP A +L+F+DCILEEG+MLYIPPKWW
Sbjct: 334 LYPSFLQDELYPYSETMLCNSSQVDLDNIDETEFPKAMELEFMDCILEEGEMLYIPPKWW 393

Query: 745 HYVRSLT 765
           HYVRSLT
Sbjct: 394 HYVRSLT 400


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