BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025558
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]       55   8e-06

>gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]
          Length = 1157

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/39 (58%), Positives = 31/39 (79%)
 Frame = +3

Query: 111 NTNSPFYIHPSDGPWMVIVSQVLNGDNYPAWCRAMRMAL 227
           N++SP+YIHPSDGP  +I++  LNG NY AW R+M+ AL
Sbjct: 10  NSDSPYYIHPSDGPSSLIITPKLNGSNYLAWHRSMQRAL 48