BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025548
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300272.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
emb|CBI22452.3| unnamed protein product [Vitis vinifera]              108   3e-22
ref|XP_002264518.1| PREDICTED: DNA polymerase kappa-like [Vitis ...   107   1e-21
ref|XP_002466818.1| hypothetical protein SORBIDRAFT_01g014630 [S...   103   2e-20
ref|XP_003538172.1| PREDICTED: DNA polymerase kappa-like [Glycin...    94   9e-18

>ref|XP_002300272.1| predicted protein [Populus trichocarpa] gi|222847530|gb|EEE85077.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  117 bits (292), Expect = 1e-24
 Identities = 65/138 (47%), Positives = 79/138 (57%), Gaps = 2/138 (1%)
 Frame = +2

Query: 11  AGSVKTADMESFLFSGQSVARSVEGLNYRDNILHKKALLSSSEKDHSLWVDDYKCSLCGA 190
           AG V           GQ    S + +N    I+H +A+ SS +KD  +WVDDYKCSLCG 
Sbjct: 66  AGEVSQWKESGLSLPGQLEGGSPDRMN--QVIMHNEAVFSSEQKDELVWVDDYKCSLCGI 123

Query: 191 ELPPGFVEERQEHSDYHFAEMLQMEESQHNSRN--FRQRSNQKTQIDXXXXXXXXXXXXX 364
           E+PP F EERQEHSD+H AE LQ +ES+ +SR    RQRS QK  I              
Sbjct: 124 EMPPYFDEERQEHSDFHLAERLQKDESRIDSRTSALRQRSVQKDHISSQSKRKKRKPSPK 183

Query: 365 DGKHLPIDLFFVKSNQNF 418
           +G HL ID+FF KSN NF
Sbjct: 184 EGGHLSIDMFFAKSNLNF 201


>emb|CBI22452.3| unnamed protein product [Vitis vinifera]
          Length = 704

 Score =  108 bits (271), Expect = 3e-22
 Identities = 65/139 (46%), Positives = 80/139 (57%), Gaps = 10/139 (7%)
 Frame = +2

Query: 32  DMESFLFSGQSVARSVEGLNYRDNILHKKALLSSSEKDHSLWVDDYKCSLCGAELPPGFV 211
           + +SF FS Q  +   +     +N L    + SS++K+  LWV+DYKCSLCG ELPP FV
Sbjct: 568 EADSFSFSEQCESNRPDRARRTNNDLDD-GVPSSNQKEQFLWVNDYKCSLCGIELPPNFV 626

Query: 212 EERQEHSDYHFAEMLQMEESQHNSRN--FRQRSNQKTQIDXXXXXXXXXXXXXDG----- 370
           EERQEH D+H AE LQ EES  NSRN    QR +Q+                 +G     
Sbjct: 627 EERQEHFDFHLAEKLQKEESD-NSRNLMLNQRFSQRDHTASQRRHKRHKSSKKEGSKSSQ 685

Query: 371 ---KHLPIDLFFVKSNQNF 418
              KHLPID+FFVKSNQNF
Sbjct: 686 KESKHLPIDMFFVKSNQNF 704


>ref|XP_002264518.1| PREDICTED: DNA polymerase kappa-like [Vitis vinifera]
          Length = 661

 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/97 (56%), Positives = 65/97 (67%)
 Frame = +2

Query: 128 SSSEKDHSLWVDDYKCSLCGAELPPGFVEERQEHSDYHFAEMLQMEESQHNSRNFRQRSN 307
           SS++K+  LWV+DYKCSLCG ELPP FVEERQEH D+H AE LQ EES  NSRN    S 
Sbjct: 567 SSNQKEQFLWVNDYKCSLCGIELPPNFVEERQEHFDFHLAEKLQKEESD-NSRNL-TASQ 624

Query: 308 QKTQIDXXXXXXXXXXXXXDGKHLPIDLFFVKSNQNF 418
           ++ +               + KHLPID+FFVKSNQNF
Sbjct: 625 RRHKRHKSSKKEGSKSSQKESKHLPIDMFFVKSNQNF 661


>ref|XP_002466818.1| hypothetical protein SORBIDRAFT_01g014630 [Sorghum bicolor]
           gi|241920672|gb|EER93816.1| hypothetical protein
           SORBIDRAFT_01g014630 [Sorghum bicolor]
          Length = 668

 Score =  103 bits (256), Expect = 2e-20
 Identities = 55/139 (39%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
 Frame = +2

Query: 5   KEAGSVKTADMESFLFSGQSVARSVEGLNYRDNILHKKALLSSSEKDHSLWVDDYKCSLC 184
           K  G  K  D+ S      +     E LN  DN++  KA+ SSS+ D   W+D Y CS+C
Sbjct: 534 KPLGGTKLDDVSS-----SAKVAPAEKLNEPDNLISPKAVASSSKPDQQSWIDGYICSIC 588

Query: 185 GAELPPGFVEERQEHSDYHFAEMLQMEESQHNSRNF--RQRSNQKTQIDXXXXXXXXXXX 358
           G ELPPGF EER EHSD+H AE LQ EE+   +R+    + ++++               
Sbjct: 589 GFELPPGFEEERLEHSDFHLAETLQQEEAVDGTRHISNERLADRERPCSTTPTPKKKLKS 648

Query: 359 XXDGKHLPIDLFFVKSNQN 415
             +GKH+PID FF K N+N
Sbjct: 649 SKEGKHIPIDAFFTKCNKN 667


>ref|XP_003538172.1| PREDICTED: DNA polymerase kappa-like [Glycine max]
          Length = 663

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 51/112 (45%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
 Frame = +2

Query: 77  VEGLNYRD--NILHKKALLSSSEKDHSLWVDDYKCSLCGAELPPGFVEERQEHSDYHFAE 250
           VEG+N ++  N+L  + L S  ++   LW++DYKCSLCG ELPP FVEER EHSD+H AE
Sbjct: 551 VEGINVKNGSNLLEDERLDSCCQEKTMLWLNDYKCSLCGIELPPSFVEERLEHSDFHLAE 610

Query: 251 MLQMEESQ-HNSRNFRQRSNQKTQIDXXXXXXXXXXXXXDGKHLPIDLFFVK 403
            LQ EES  H      Q   QK  +              +G + PID FFVK
Sbjct: 611 KLQKEESSIHQKSVPSQSKGQKDGVTRQSKSKKQKLSQKEGSYTPIDYFFVK 662