BLASTX nr result
ID: Coptis24_contig00025548
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00025548 (465 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002300272.1| predicted protein [Populus trichocarpa] gi|2... 117 1e-24 emb|CBI22452.3| unnamed protein product [Vitis vinifera] 108 3e-22 ref|XP_002264518.1| PREDICTED: DNA polymerase kappa-like [Vitis ... 107 1e-21 ref|XP_002466818.1| hypothetical protein SORBIDRAFT_01g014630 [S... 103 2e-20 ref|XP_003538172.1| PREDICTED: DNA polymerase kappa-like [Glycin... 94 9e-18 >ref|XP_002300272.1| predicted protein [Populus trichocarpa] gi|222847530|gb|EEE85077.1| predicted protein [Populus trichocarpa] Length = 201 Score = 117 bits (292), Expect = 1e-24 Identities = 65/138 (47%), Positives = 79/138 (57%), Gaps = 2/138 (1%) Frame = +2 Query: 11 AGSVKTADMESFLFSGQSVARSVEGLNYRDNILHKKALLSSSEKDHSLWVDDYKCSLCGA 190 AG V GQ S + +N I+H +A+ SS +KD +WVDDYKCSLCG Sbjct: 66 AGEVSQWKESGLSLPGQLEGGSPDRMN--QVIMHNEAVFSSEQKDELVWVDDYKCSLCGI 123 Query: 191 ELPPGFVEERQEHSDYHFAEMLQMEESQHNSRN--FRQRSNQKTQIDXXXXXXXXXXXXX 364 E+PP F EERQEHSD+H AE LQ +ES+ +SR RQRS QK I Sbjct: 124 EMPPYFDEERQEHSDFHLAERLQKDESRIDSRTSALRQRSVQKDHISSQSKRKKRKPSPK 183 Query: 365 DGKHLPIDLFFVKSNQNF 418 +G HL ID+FF KSN NF Sbjct: 184 EGGHLSIDMFFAKSNLNF 201 >emb|CBI22452.3| unnamed protein product [Vitis vinifera] Length = 704 Score = 108 bits (271), Expect = 3e-22 Identities = 65/139 (46%), Positives = 80/139 (57%), Gaps = 10/139 (7%) Frame = +2 Query: 32 DMESFLFSGQSVARSVEGLNYRDNILHKKALLSSSEKDHSLWVDDYKCSLCGAELPPGFV 211 + +SF FS Q + + +N L + SS++K+ LWV+DYKCSLCG ELPP FV Sbjct: 568 EADSFSFSEQCESNRPDRARRTNNDLDD-GVPSSNQKEQFLWVNDYKCSLCGIELPPNFV 626 Query: 212 EERQEHSDYHFAEMLQMEESQHNSRN--FRQRSNQKTQIDXXXXXXXXXXXXXDG----- 370 EERQEH D+H AE LQ EES NSRN QR +Q+ +G Sbjct: 627 EERQEHFDFHLAEKLQKEESD-NSRNLMLNQRFSQRDHTASQRRHKRHKSSKKEGSKSSQ 685 Query: 371 ---KHLPIDLFFVKSNQNF 418 KHLPID+FFVKSNQNF Sbjct: 686 KESKHLPIDMFFVKSNQNF 704 >ref|XP_002264518.1| PREDICTED: DNA polymerase kappa-like [Vitis vinifera] Length = 661 Score = 107 bits (266), Expect = 1e-21 Identities = 55/97 (56%), Positives = 65/97 (67%) Frame = +2 Query: 128 SSSEKDHSLWVDDYKCSLCGAELPPGFVEERQEHSDYHFAEMLQMEESQHNSRNFRQRSN 307 SS++K+ LWV+DYKCSLCG ELPP FVEERQEH D+H AE LQ EES NSRN S Sbjct: 567 SSNQKEQFLWVNDYKCSLCGIELPPNFVEERQEHFDFHLAEKLQKEESD-NSRNL-TASQ 624 Query: 308 QKTQIDXXXXXXXXXXXXXDGKHLPIDLFFVKSNQNF 418 ++ + + KHLPID+FFVKSNQNF Sbjct: 625 RRHKRHKSSKKEGSKSSQKESKHLPIDMFFVKSNQNF 661 >ref|XP_002466818.1| hypothetical protein SORBIDRAFT_01g014630 [Sorghum bicolor] gi|241920672|gb|EER93816.1| hypothetical protein SORBIDRAFT_01g014630 [Sorghum bicolor] Length = 668 Score = 103 bits (256), Expect = 2e-20 Identities = 55/139 (39%), Positives = 75/139 (53%), Gaps = 2/139 (1%) Frame = +2 Query: 5 KEAGSVKTADMESFLFSGQSVARSVEGLNYRDNILHKKALLSSSEKDHSLWVDDYKCSLC 184 K G K D+ S + E LN DN++ KA+ SSS+ D W+D Y CS+C Sbjct: 534 KPLGGTKLDDVSS-----SAKVAPAEKLNEPDNLISPKAVASSSKPDQQSWIDGYICSIC 588 Query: 185 GAELPPGFVEERQEHSDYHFAEMLQMEESQHNSRNF--RQRSNQKTQIDXXXXXXXXXXX 358 G ELPPGF EER EHSD+H AE LQ EE+ +R+ + ++++ Sbjct: 589 GFELPPGFEEERLEHSDFHLAETLQQEEAVDGTRHISNERLADRERPCSTTPTPKKKLKS 648 Query: 359 XXDGKHLPIDLFFVKSNQN 415 +GKH+PID FF K N+N Sbjct: 649 SKEGKHIPIDAFFTKCNKN 667 >ref|XP_003538172.1| PREDICTED: DNA polymerase kappa-like [Glycine max] Length = 663 Score = 94.4 bits (233), Expect = 9e-18 Identities = 51/112 (45%), Positives = 64/112 (57%), Gaps = 3/112 (2%) Frame = +2 Query: 77 VEGLNYRD--NILHKKALLSSSEKDHSLWVDDYKCSLCGAELPPGFVEERQEHSDYHFAE 250 VEG+N ++ N+L + L S ++ LW++DYKCSLCG ELPP FVEER EHSD+H AE Sbjct: 551 VEGINVKNGSNLLEDERLDSCCQEKTMLWLNDYKCSLCGIELPPSFVEERLEHSDFHLAE 610 Query: 251 MLQMEESQ-HNSRNFRQRSNQKTQIDXXXXXXXXXXXXXDGKHLPIDLFFVK 403 LQ EES H Q QK + +G + PID FFVK Sbjct: 611 KLQKEESSIHQKSVPSQSKGQKDGVTRQSKSKKQKLSQKEGSYTPIDYFFVK 662