BLASTX nr result

ID: Coptis24_contig00025545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025545
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK91897.1|AC091627_10 Hsp20/alpha crystallin family protein ...   101   5e-20
gb|AAK91893.1|AC091627_6 Hsp20/alpha crystallin family protein [...   100   2e-19
ref|XP_002310972.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
emb|CBI24391.3| unnamed protein product [Vitis vinifera]               92   3e-17
ref|NP_001146453.1| uncharacterized protein LOC100280039 [Zea ma...    91   1e-16

>gb|AAK91897.1|AC091627_10 Hsp20/alpha crystallin family protein [Solanum demissum]
          Length = 247

 Score =  101 bits (252), Expect = 5e-20
 Identities = 51/121 (42%), Positives = 80/121 (66%), Gaps = 4/121 (3%)
 Frame = +3

Query: 42  RSYEDFQPSSDLLQEDTREILTINLPGFRKDQIRVQMDDRSGFVMISGERPVGNNKWNRF 221
           ++YEDF P+++L+QE   + L I+L GF+K+Q+R+Q+  R+G + ISG+RPV  +KW RF
Sbjct: 10  QTYEDFVPTTELVQEQDSDTLLIDLTGFKKEQVRIQLT-RTGVLKISGQRPVAESKWLRF 68

Query: 222 RKSLRVPTNCNTQEIQAKFENAVLKITMP-IKTGDKKQEQLVPKSD---QTQLSQTPKPI 389
           +K   V  NC+  +I AKFEN +L +  P + T  + + Q +P SD   Q +L+  P+P 
Sbjct: 69  QKDFPVSQNCDKTKISAKFENGILHVKQPKLITSSENKGQELPTSDAQRQQKLADEPQPT 128

Query: 390 P 392
           P
Sbjct: 129 P 129


>gb|AAK91893.1|AC091627_6 Hsp20/alpha crystallin family protein [Solanum demissum]
          Length = 247

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 51/120 (42%), Positives = 76/120 (63%), Gaps = 2/120 (1%)
 Frame = +3

Query: 42  RSYEDFQPSSDLLQEDTREILTINLPGFRKDQIRVQMDDRSGFVMISGERPVGNNKWNRF 221
           ++YEDF P+++L+QE   + L I+L GF+K+Q+RVQ+  R+G + ISG+RPV  +KW RF
Sbjct: 10  QTYEDFVPTTELVQEQDSDTLLIDLTGFKKEQVRVQLI-RTGVLKISGQRPVAESKWLRF 68

Query: 222 RKSLRVPTNCNTQEIQAKFENAVLKITMP--IKTGDKKQEQLVPKSDQTQLSQTPKPIPT 395
           +K   V  NC+  +I AKFEN +L +  P  I + + K ++L     Q Q     KP PT
Sbjct: 69  QKDFPVSQNCDKTKISAKFENGILYVKQPKLITSSENKGQELPTSDAQRQQKPEDKPQPT 128


>ref|XP_002310972.1| predicted protein [Populus trichocarpa] gi|222850792|gb|EEE88339.1|
           predicted protein [Populus trichocarpa]
          Length = 370

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 56/142 (39%), Positives = 80/142 (56%), Gaps = 18/142 (12%)
 Frame = +3

Query: 12  MATRPRIIG--ARSYEDFQPSSDLLQEDTREILTINLPGFRKDQIRVQMDDRSGFVMISG 185
           MA + RI G  A  YED QP S+  +E+   +L I+LP F K+Q+++     S  V ++G
Sbjct: 1   MAMKTRIGGYAAIQYEDCQPKSEWKEEEGENVLRIHLPDFLKEQLKITYVHSSRIVRVTG 60

Query: 186 ERPVGNNKWNRFRKSLRVPTNCNTQEIQAKFENAVLKITMP---IKTGDKKQ------EQ 338
           ERP+  NKW+RF ++  VP NC   +IQ KF + +L ITMP   IK   +K+      E 
Sbjct: 61  ERPLSYNKWSRFNQTFPVPQNCEVNKIQGKFHDGILSITMPKATIKQSHRKEEAKGTKEA 120

Query: 339 LVPKSD-------QTQLSQTPK 383
           L+P  D        +Q+SQ PK
Sbjct: 121 LLPSKDALPEKTTTSQVSQKPK 142


>emb|CBI24391.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 49/117 (41%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
 Frame = +3

Query: 42  RSYEDFQPSSDLLQEDTREILTINLPGFRKDQIRVQMDDRSGFVMISGERPVGNNKWNRF 221
           R Y +F+PS +   +D    L + LPGF K  +RVQ+   SG + +SGERP+G  +WNRF
Sbjct: 11  RVYVEFEPSMEWAWDDKWGTLLLYLPGFSKQHLRVQVTS-SGMLKLSGERPIGGERWNRF 69

Query: 222 RKSLRVPTNCNTQEIQAKFENAVLKITMP--IKTGDKKQEQLVPKSDQTQLSQTPKP 386
            K ++VP NC+T  I AKFEN +L +  P  I T  ++Q+ + P+      +Q PKP
Sbjct: 70  YKEVQVPKNCDTNAIIAKFENGILYVQFPKVISTPAEQQDTVKPQ------TQPPKP 120


>ref|NP_001146453.1| uncharacterized protein LOC100280039 [Zea mays]
           gi|219887317|gb|ACL54033.1| unknown [Zea mays]
           gi|413934164|gb|AFW68715.1| hypothetical protein
           ZEAMMB73_323128 [Zea mays]
          Length = 253

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 7/124 (5%)
 Frame = +3

Query: 36  GARSYEDFQPSSDLLQEDTREILTINLP--GFRKDQIRVQMDDRSGFVMISGERPVGNNK 209
           G R YEDF+P   + +E     LT++L   G+RK+ IRVQM      +++ GERPV  N+
Sbjct: 4   GERVYEDFKPPHKMEREPATHTLTVDLSAQGYRKEHIRVQMVHSHRCLIVRGERPVDGNR 63

Query: 210 WNRFRKSLRVPTNCNTQEIQAKFENAVLKITMPIKTGDKKQEQLVP-----KSDQTQLSQ 374
           W+RFR  L VP  C+ + + A+F+N V+++TMP   G ++ E ++P        Q Q  +
Sbjct: 64  WSRFRLDLPVPDGCDAKAVHARFDNGVVRVTMP---GVQQPEPVLPVVAGTADQQQQQQE 120

Query: 375 TPKP 386
           TP P
Sbjct: 121 TPLP 124


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